RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 ACY3Q96HD9 319 aa9.9□□□□□ -0.82
VEGFA-219ENST00000518824 C7orf50Q9BRJ6 194 aaKnown RBP9.9□□□□□ -0.82
VEGFA-219ENST00000518824 VSIRQ9H7M9 311 aa9.9□□□□□ -0.82
VEGFA-219ENST00000518824 TMED3Q9Y3Q3 217 aa9.9□□□□□ -0.82
VEGFA-219ENST00000518824 RPS10-NUDT3A0A1W2PQS6 291 aa9.89□□□□□ -0.83
VEGFA-219ENST00000518824 WRBO00258 174 aa9.89□□□□□ -0.83
VEGFA-219ENST00000518824 DFFBO76075 338 aa9.89□□□□□ -0.83
VEGFA-219ENST00000518824 SLC25A6P12236 298 aa9.89□□□□□ -0.83
VEGFA-219ENST00000518824 TCF24Q7RTU0 167 aa9.89□□□□□ -0.83
VEGFA-219ENST00000518824 SPAG8Q99932 426 aaPredicted RBP9.89□□□□□ -0.83
VEGFA-219ENST00000518824 C20orf85Q9H1P6 137 aa9.89□□□□□ -0.83
VEGFA-219ENST00000518824 ZMAT4Q9H898 229 aa9.89□□□□□ -0.83
VEGFA-219ENST00000518824 TBC1D24Q9ULP9 559 aa9.89□□□□□ -0.83
VEGFA-219ENST00000518824 U3KQ87 197 aa9.89□□□□□ -0.83
VEGFA-219ENST00000518824 NBEAL2Q6ZNJ1 2754 aa9.88□□□□□ -0.83
VEGFA-219ENST00000518824 IGKV1D-37A0A075B6S9 117 aa9.88□□□□□ -0.83
VEGFA-219ENST00000518824 TRAV6A0A075B6T7 132 aa9.88□□□□□ -0.83
VEGFA-219ENST00000518824 CENPXA8MT69 81 aa9.88□□□□□ -0.83
VEGFA-219ENST00000518824 IFNA4P05014 189 aa9.88□□□□□ -0.83
VEGFA-219ENST00000518824 SLC25A4P12235 298 aa9.88□□□□□ -0.83
VEGFA-219ENST00000518824 OR10J1P30954 320 aa9.88□□□□□ -0.83
VEGFA-219ENST00000518824 C4orf46Q504U0 113 aa9.88□□□□□ -0.83
VEGFA-219ENST00000518824 LAMTOR1Q6IAA8 161 aa9.88□□□□□ -0.83
VEGFA-219ENST00000518824 WFDC3Q8IUB2 231 aa9.88□□□□□ -0.83
VEGFA-219ENST00000518824 APRG1Q8IVJ8 170 aa9.88□□□□□ -0.83
VEGFA-219ENST00000518824 FAM24BQ8N5W8 94 aa9.88□□□□□ -0.83
VEGFA-219ENST00000518824 H3BP45 60 aa9.87□□□□□ -0.83
VEGFA-219ENST00000518824 SYNGR2O43760 224 aa9.87□□□□□ -0.83
VEGFA-219ENST00000518824 TCRBP04435 133 aa9.87□□□□□ -0.83
VEGFA-219ENST00000518824 CRYBB3P26998 211 aa9.87□□□□□ -0.83
VEGFA-219ENST00000518824 POLR2GP62487 172 aaKnown RBP eCLIP9.87□□□□□ -0.83
VEGFA-219ENST00000518824 IFITM3Q01628 133 aa9.87□□□□□ -0.83
VEGFA-219ENST00000518824 GAMTQ14353 236 aa9.87□□□□□ -0.83
VEGFA-219ENST00000518824 USF2Q15853 346 aaPredicted RBP9.87□□□□□ -0.83
VEGFA-219ENST00000518824 OR4D5Q8NGN0 318 aa9.87□□□□□ -0.83
VEGFA-219ENST00000518824 OR1S2Q8NGQ3 325 aa9.87□□□□□ -0.83
VEGFA-219ENST00000518824 SPATA25Q9BR10 227 aa9.87□□□□□ -0.83
VEGFA-219ENST00000518824 SEC22CQ9BRL7 303 aa9.87□□□□□ -0.83
VEGFA-219ENST00000518824 GINS3Q9BRX5 216 aa9.87□□□□□ -0.83
VEGFA-219ENST00000518824 EDA2RQ9HAV5 297 aa9.87□□□□□ -0.83
VEGFA-219ENST00000518824 PAIP2BQ9ULR5 123 aaKnown RBP9.87□□□□□ -0.83
VEGFA-219ENST00000518824 TRAV30A0A087WSZ9 112 aa9.86□□□□□ -0.83
VEGFA-219ENST00000518824 FAM90A26D6RGX4 464 aa9.86□□□□□ -0.83
VEGFA-219ENST00000518824 PRSS46E5RG02 174 aa9.86□□□□□ -0.83
VEGFA-219ENST00000518824 CCSO14618 274 aa9.86□□□□□ -0.83
VEGFA-219ENST00000518824 CCNKO75909 580 aa9.86□□□□□ -0.83
VEGFA-219ENST00000518824 PSG1P11464 419 aa9.86□□□□□ -0.83
VEGFA-219ENST00000518824 NPPCP23582 126 aa9.86□□□□□ -0.83
VEGFA-219ENST00000518824 YPEL3P61236 119 aaPredicted RBP9.86□□□□□ -0.83
VEGFA-219ENST00000518824 ID3Q02535 119 aa9.86□□□□□ -0.83
VEGFA-219ENST00000518824 ZNF90Q03938 601 aa9.86□□□□□ -0.83
VEGFA-219ENST00000518824 GSG1LQ6UXU4 331 aa9.86□□□□□ -0.83
VEGFA-219ENST00000518824 COQ8AQ8NI60 647 aa9.86□□□□□ -0.83
VEGFA-219ENST00000518824 CCDC32Q9BV29 185 aa9.86□□□□□ -0.83
VEGFA-219ENST00000518824 CACFD1Q9UGQ2 172 aa9.86□□□□□ -0.83
VEGFA-219ENST00000518824 U3KQE9 123 aa9.86□□□□□ -0.83
VEGFA-219ENST00000518824 DNAH7Q8WXX0 4024 aa9.86□□□□□ -0.83
VEGFA-219ENST00000518824 IGKV1OR2-108A0A075B7D4 117 aa9.85□□□□□ -0.83
VEGFA-219ENST00000518824 OR4C46A6NHA9 309 aa9.85□□□□□ -0.83
VEGFA-219ENST00000518824 TOMM40O96008 361 aa9.85□□□□□ -0.83
VEGFA-219ENST00000518824 IL4P05112 153 aa9.85□□□□□ -0.83
VEGFA-219ENST00000518824 RPL35AP18077 110 aaKnown RBP9.85□□□□□ -0.83
VEGFA-219ENST00000518824 P2RY1P47900 373 aa9.85□□□□□ -0.83
VEGFA-219ENST00000518824 SPANXN5Q5MJ07 72 aa9.85□□□□□ -0.83
VEGFA-219ENST00000518824 ETFRF1Q6IPR1 90 aa9.85□□□□□ -0.83
VEGFA-219ENST00000518824 NOXA1Q86UR1 476 aa9.85□□□□□ -0.83
VEGFA-219ENST00000518824 Q8WTZ3 238 aa9.85□□□□□ -0.83
VEGFA-219ENST00000518824 MITD1Q8WV92 249 aa9.85□□□□□ -0.83
VEGFA-219ENST00000518824 METTL26Q96S19 204 aa9.85□□□□□ -0.83
VEGFA-219ENST00000518824 GGTLC1Q9BX51 225 aa9.85□□□□□ -0.83
VEGFA-219ENST00000518824 MS4A6AQ9H2W1 248 aa9.85□□□□□ -0.83
VEGFA-219ENST00000518824 MAP6D1Q9H9H5 199 aa9.85□□□□□ -0.83
VEGFA-219ENST00000518824 NUDT15Q9NV35 164 aa9.85□□□□□ -0.83
VEGFA-219ENST00000518824 LOC102724200A0A096LPH7 203 aaPredicted RBP9.84□□□□□ -0.83
VEGFA-219ENST00000518824 PIGBOS1A0A0B4J2F0 54 aa9.84□□□□□ -0.83
VEGFA-219ENST00000518824 MED6O75586 246 aa9.84□□□□□ -0.83
VEGFA-219ENST00000518824 GPX4P36969 197 aaPredicted RBP9.84□□□□□ -0.83
VEGFA-219ENST00000518824 PAX9P55771 341 aa9.84□□□□□ -0.83
VEGFA-219ENST00000518824 LINC00299Q6ZSB3 139 aa9.84□□□□□ -0.83
VEGFA-219ENST00000518824 STPG3Q8N7X2 389 aa9.84□□□□□ -0.83
VEGFA-219ENST00000518824 OR51G1Q8NGK1 321 aa9.84□□□□□ -0.83
VEGFA-219ENST00000518824 PTTG2Q9NZH5 202 aa9.84□□□□□ -0.83
VEGFA-219ENST00000518824 PMS2P5A8MQ11 134 aa9.83□□□□□ -0.84
VEGFA-219ENST00000518824 SSSCA1O60232 199 aa9.83□□□□□ -0.84
VEGFA-219ENST00000518824 SCGB1D2O95969 90 aa9.83□□□□□ -0.84
VEGFA-219ENST00000518824 H2AFB2P0C5Z0 115 aa9.83□□□□□ -0.84
VEGFA-219ENST00000518824 RD3LP0DJH9 198 aa9.83□□□□□ -0.84
VEGFA-219ENST00000518824 NKX2-1P43699 371 aaPredicted RBP9.83□□□□□ -0.84
VEGFA-219ENST00000518824 RPL11P62913 178 aaKnown RBP9.83□□□□□ -0.84
VEGFA-219ENST00000518824 OR2F1Q13607 317 aa9.83□□□□□ -0.84
VEGFA-219ENST00000518824 IAH1Q2TAA2 248 aaPredicted RBP9.83□□□□□ -0.84
VEGFA-219ENST00000518824 C16orf54Q6UWD8 224 aa9.83□□□□□ -0.84
VEGFA-219ENST00000518824 TMEM182Q6ZP80 229 aaPredicted RBP9.83□□□□□ -0.84
VEGFA-219ENST00000518824 ZBTB8BQ8NAP8 495 aaPredicted RBP9.83□□□□□ -0.84
VEGFA-219ENST00000518824 GLMPQ8WWB7 406 aa9.83□□□□□ -0.84
VEGFA-219ENST00000518824 S100ZQ8WXG8 99 aa9.83□□□□□ -0.84
VEGFA-219ENST00000518824 SLC35E1Q96K37 410 aa9.83□□□□□ -0.84
VEGFA-219ENST00000518824 OVOL2Q9BRP0 275 aa9.83□□□□□ -0.84
VEGFA-219ENST00000518824 RCL1Q9Y2P8 373 aaKnown RBP9.83□□□□□ -0.84
VEGFA-219ENST00000518824 AGRNO00468 2067 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms