RNA–Protein interactions for RNA: ENST00000518638.1

CCDC6-203, Transcript of coiled-coil domain containing 6, humanhuman

TSL 2

Gene CCDC6, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-203ENST00000518638 OR10J5Q8NHC4 309 aa4.31□□□□□ -1.72
CCDC6-203ENST00000518638 SMIM19Q96E16 107 aa4.31□□□□□ -1.72
CCDC6-203ENST00000518638 Q96MT0 163 aa4.31□□□□□ -1.72
CCDC6-203ENST00000518638 SLC29A1Q99808 456 aa4.31□□□□□ -1.72
CCDC6-203ENST00000518638 CIB1Q99828 191 aa4.31□□□□□ -1.72
CCDC6-203ENST00000518638 FAAP24Q9BTP7 215 aa4.31□□□□□ -1.72
CCDC6-203ENST00000518638 C20orf24Q9BUV8 137 aa4.31□□□□□ -1.72
CCDC6-203ENST00000518638 SMPXQ9UHP9 88 aa4.31□□□□□ -1.72
CCDC6-203ENST00000518638 S4R3C0 116 aa4.31□□□□□ -1.72
CCDC6-203ENST00000518638 IGHV3-35A0A0C4DH35 117 aa4.3□□□□□ -1.72
CCDC6-203ENST00000518638 IGHV7-4-1A0A0J9YVY3 117 aa4.3□□□□□ -1.72
CCDC6-203ENST00000518638 FBLL1A6NHQ2 334 aaKnown RBP4.3□□□□□ -1.72
CCDC6-203ENST00000518638 DNASE2O00115 360 aaPredicted RBP4.3□□□□□ -1.72
CCDC6-203ENST00000518638 SLC22A5O76082 557 aa4.3□□□□□ -1.72
CCDC6-203ENST00000518638 PRSS1P07477 247 aa4.3□□□□□ -1.72
CCDC6-203ENST00000518638 CD36P16671 472 aa4.3□□□□□ -1.72
CCDC6-203ENST00000518638 RANBP1P43487 201 aa4.3□□□□□ -1.72
CCDC6-203ENST00000518638 TFPI2P48307 235 aa4.3□□□□□ -1.72
CCDC6-203ENST00000518638 DEFB131AP59861 70 aa4.3□□□□□ -1.72
CCDC6-203ENST00000518638 RPS27AP62979 156 aaKnown RBP4.3□□□□□ -1.72
CCDC6-203ENST00000518638 MRPS15P82914 257 aaKnown RBP4.3□□□□□ -1.72
CCDC6-203ENST00000518638 OR2G6Q5TZ20 316 aa4.3□□□□□ -1.72
CCDC6-203ENST00000518638 TMPRSS11AQ6ZMR5 421 aa4.3□□□□□ -1.72
CCDC6-203ENST00000518638 Q6ZRG5 221 aa4.3□□□□□ -1.72
CCDC6-203ENST00000518638 SSX9Q7RTT3 188 aa4.3□□□□□ -1.72
CCDC6-203ENST00000518638 HSD17B13Q7Z5P4 300 aaPredicted RBP4.3□□□□□ -1.72
CCDC6-203ENST00000518638 TRPT1Q86TN4 253 aaKnown RBP4.3□□□□□ -1.72
CCDC6-203ENST00000518638 OR4S2Q8NH73 311 aa4.3□□□□□ -1.72
CCDC6-203ENST00000518638 TMEM167AQ8TBQ9 72 aa4.3□□□□□ -1.72
CCDC6-203ENST00000518638 RNF2Q99496 336 aa4.3□□□□□ -1.72
CCDC6-203ENST00000518638 GINS3Q9BRX5 216 aa4.3□□□□□ -1.72
CCDC6-203ENST00000518638 RHPN1-AS1Q9BWJ2 59 aa4.3□□□□□ -1.72
CCDC6-203ENST00000518638 TM2D1Q9BX74 207 aa4.3□□□□□ -1.72
CCDC6-203ENST00000518638 CELA1Q9UNI1 258 aa4.3□□□□□ -1.72
CCDC6-203ENST00000518638 ORC6Q9Y5N6 252 aa4.3□□□□□ -1.72
CCDC6-203ENST00000518638 TRAV8-7A0A075B6U6 113 aa4.29□□□□□ -1.72
CCDC6-203ENST00000518638 TCRBV3S1A0A5B6 114 aa4.29□□□□□ -1.72
CCDC6-203ENST00000518638 SMIM9A6NGZ8 99 aa4.29□□□□□ -1.72
CCDC6-203ENST00000518638 OR2T8A6NH00 312 aa4.29□□□□□ -1.72
CCDC6-203ENST00000518638 TRDCB7Z8K6 153 aa4.29□□□□□ -1.72
CCDC6-203ENST00000518638 NUPL2O15504 423 aaKnown RBP4.29□□□□□ -1.72
CCDC6-203ENST00000518638 CELP19835 753 aa4.29□□□□□ -1.72
CCDC6-203ENST00000518638 GNRHRP30968 328 aa4.29□□□□□ -1.72
CCDC6-203ENST00000518638 FGF9P31371 208 aaPredicted RBP4.29□□□□□ -1.72
CCDC6-203ENST00000518638 TAS2R43P59537 309 aa4.29□□□□□ -1.72
CCDC6-203ENST00000518638 SEC61GP60059 68 aa4.29□□□□□ -1.72
CCDC6-203ENST00000518638 RPL8P62917 257 aaKnown RBP4.29□□□□□ -1.72
CCDC6-203ENST00000518638 RIGQ13278 110 aa4.29□□□□□ -1.72
CCDC6-203ENST00000518638 OXA1LQ15070 435 aa4.29□□□□□ -1.72
CCDC6-203ENST00000518638 HSP90B2PQ58FF3 399 aa4.29□□□□□ -1.72
CCDC6-203ENST00000518638 DUSP18Q8NEJ0 188 aa4.29□□□□□ -1.72
CCDC6-203ENST00000518638 CMSS1Q9BQ75 279 aaKnown RBP4.29□□□□□ -1.72
CCDC6-203ENST00000518638 GINS4Q9BRT9 223 aa4.29□□□□□ -1.72
CCDC6-203ENST00000518638 CABLES2Q9BTV7 478 aa4.29□□□□□ -1.72
CCDC6-203ENST00000518638 YTHDF1Q9BYJ9 559 aaKnown RBP4.29□□□□□ -1.72
CCDC6-203ENST00000518638 MBD2Q9UBB5 411 aa4.29□□□□□ -1.72
CCDC6-203ENST00000518638 AK3Q9UIJ7 227 aa4.29□□□□□ -1.72
CCDC6-203ENST00000518638 ARL2BPQ9Y2Y0 163 aa4.29□□□□□ -1.72
CCDC6-203ENST00000518638 PUS1Q9Y606 427 aaKnown RBP eCLIP4.29□□□□□ -1.72
CCDC6-203ENST00000518638 APOBP04114 4563 aaKnown RBP4.29□□□□□ -1.72
CCDC6-203ENST00000518638 IGKV3-7A0A075B6H7 116 aa4.28□□□□□ -1.72
CCDC6-203ENST00000518638 TRBV6-7A0A0A0MS04 114 aa4.28□□□□□ -1.72
CCDC6-203ENST00000518638 TRAV14DV4A0A0A6YYC5 116 aa4.28□□□□□ -1.72
CCDC6-203ENST00000518638 IRGMA1A4Y4 181 aa4.28□□□□□ -1.72
CCDC6-203ENST00000518638 PCP4L1A6NKN8 68 aa4.28□□□□□ -1.72
CCDC6-203ENST00000518638 BET1O15155 118 aa4.28□□□□□ -1.72
CCDC6-203ENST00000518638 FABP7O15540 132 aa4.28□□□□□ -1.72
CCDC6-203ENST00000518638 HRASP01112 189 aa4.28□□□□□ -1.72
CCDC6-203ENST00000518638 REG1AP05451 166 aa4.28□□□□□ -1.72
CCDC6-203ENST00000518638 STAG3L3P0CL85 134 aa4.28□□□□□ -1.72
CCDC6-203ENST00000518638 HLA-GP17693 338 aa4.28□□□□□ -1.72
CCDC6-203ENST00000518638 GTF2A1P52655 376 aaPredicted RBP4.28□□□□□ -1.72
CCDC6-203ENST00000518638 CCL18P55774 89 aa4.28□□□□□ -1.72
CCDC6-203ENST00000518638 FGL1Q08830 312 aa4.28□□□□□ -1.72
CCDC6-203ENST00000518638 LEMD1Q68G75 181 aa4.28□□□□□ -1.72
CCDC6-203ENST00000518638 STEAP1BQ6NZ63 245 aa4.28□□□□□ -1.72
CCDC6-203ENST00000518638 Q6ZVQ6 151 aa4.28□□□□□ -1.72
CCDC6-203ENST00000518638 ZNF767PQ75MW2 155 aa4.28□□□□□ -1.72
CCDC6-203ENST00000518638 TCF24Q7RTU0 167 aa4.28□□□□□ -1.72
CCDC6-203ENST00000518638 PUSL1Q8N0Z8 303 aaKnown RBP4.28□□□□□ -1.72
CCDC6-203ENST00000518638 DGCR14Q96DF8 476 aaKnown RBP4.28□□□□□ -1.72
CCDC6-203ENST00000518638 OR10C1Q96KK4 312 aa4.28□□□□□ -1.72
CCDC6-203ENST00000518638 NIPSNAP3BQ9BS92 247 aa4.28□□□□□ -1.72
CCDC6-203ENST00000518638 FAM107BQ9H098 131 aa4.28□□□□□ -1.72
CCDC6-203ENST00000518638 C21orf62Q9NYP8 219 aa4.28□□□□□ -1.72
CCDC6-203ENST00000518638 IGKV1-6A0A0C4DH72 117 aa4.27□□□□□ -1.73
CCDC6-203ENST00000518638 PMS2P5A8MQ11 134 aa4.27□□□□□ -1.73
CCDC6-203ENST00000518638 ZNF207O43670 478 aaKnown RBP4.27□□□□□ -1.73
CCDC6-203ENST00000518638 YIF1AO95070 293 aa4.27□□□□□ -1.73
CCDC6-203ENST00000518638 TSHBP01222 138 aa4.27□□□□□ -1.73
CCDC6-203ENST00000518638 CDK1P06493 297 aa4.27□□□□□ -1.73
CCDC6-203ENST00000518638 GIG44P09565 113 aaPredicted RBP4.27□□□□□ -1.73
CCDC6-203ENST00000518638 MYL12AP19105 171 aa4.27□□□□□ -1.73
CCDC6-203ENST00000518638 C4BPBP20851 252 aa4.27□□□□□ -1.73
CCDC6-203ENST00000518638 CRHBPP24387 322 aa4.27□□□□□ -1.73
CCDC6-203ENST00000518638 DCKP27707 260 aa4.27□□□□□ -1.73
CCDC6-203ENST00000518638 HTR2CP28335 458 aa4.27□□□□□ -1.73
CCDC6-203ENST00000518638 POLR2IP36954 125 aaKnown RBP4.27□□□□□ -1.73
CCDC6-203ENST00000518638 ALDH3B2P48448 385 aa4.27□□□□□ -1.73
CCDC6-203ENST00000518638 EIF2B2P49770 351 aaKnown RBP4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms