RNA–Protein interactions for RNA: ENST00000515531.1

SMARCA5-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-203ENST00000515531 OR2J2O76002 312 aa0.33□□□□□ -2.36
SMARCA5-203ENST00000515531 PRH1P02810 166 aa0.33□□□□□ -2.36
SMARCA5-203ENST00000515531 OR4E1P0C645 316 aa0.33□□□□□ -2.36
SMARCA5-203ENST00000515531 SULT1A1P50225 295 aa0.33□□□□□ -2.36
SMARCA5-203ENST00000515531 ESRGQ1W209 222 aa0.33□□□□□ -2.36
SMARCA5-203ENST00000515531 CCDC122Q5T0U0 273 aa0.33□□□□□ -2.36
SMARCA5-203ENST00000515531 DCUN1D1Q96GG9 259 aa0.33□□□□□ -2.36
SMARCA5-203ENST00000515531 NIT2Q9NQR4 276 aa0.33□□□□□ -2.36
SMARCA5-203ENST00000515531 TMEM14CQ9P0S9 112 aa0.33□□□□□ -2.36
SMARCA5-203ENST00000515531 GUCA1BQ9UMX6 200 aa0.33□□□□□ -2.36
SMARCA5-203ENST00000515531 SNAPC4Q5SXM2 1469 aa0.33□□□□□ -2.36
SMARCA5-203ENST00000515531 TAF1LQ8IZX4 1826 aa0.33□□□□□ -2.36
SMARCA5-203ENST00000515531 DOCK5Q9H7D0 1870 aa0.33□□□□□ -2.36
SMARCA5-203ENST00000515531 CNTRLQ7Z7A1 2325 aa0.32□□□□□ -2.36
SMARCA5-203ENST00000515531 WRNQ14191 1432 aaPredicted RBP eCLIP0.32□□□□□ -2.36
SMARCA5-203ENST00000515531 SMIM10L2AP0DMW4 78 aa0.32□□□□□ -2.36
SMARCA5-203ENST00000515531 SMIM10L2BP0DMW5 78 aa0.32□□□□□ -2.36
SMARCA5-203ENST00000515531 LINC01554Q52M75 96 aa0.32□□□□□ -2.36
SMARCA5-203ENST00000515531 LINC00322Q6ZN03 302 aaPredicted RBP0.32□□□□□ -2.36
SMARCA5-203ENST00000515531 SMR3AQ99954 134 aa0.32□□□□□ -2.36
SMARCA5-203ENST00000515531 C20orf27Q9GZN8 174 aa0.32□□□□□ -2.36
SMARCA5-203ENST00000515531 CCDC90BQ9GZT6 254 aa0.32□□□□□ -2.36
SMARCA5-203ENST00000515531 DCSTAMPQ9H295 470 aa0.32□□□□□ -2.36
SMARCA5-203ENST00000515531 C14orf132Q9NPU4 83 aa0.32□□□□□ -2.36
SMARCA5-203ENST00000515531 USP24Q9UPU5 2620 aa0.32□□□□□ -2.36
SMARCA5-203ENST00000515531 TRBV6-4A0A1B0GX49 114 aa0.31□□□□□ -2.36
SMARCA5-203ENST00000515531 OR2T8A6NH00 312 aa0.31□□□□□ -2.36
SMARCA5-203ENST00000515531 OR4C46A6NHA9 309 aa0.31□□□□□ -2.36
SMARCA5-203ENST00000515531 RBP1P09455 135 aa0.31□□□□□ -2.36
SMARCA5-203ENST00000515531 ACOT6Q3I5F7 207 aaPredicted RBP0.31□□□□□ -2.36
SMARCA5-203ENST00000515531 LCA10Q71F78 164 aa0.31□□□□□ -2.36
SMARCA5-203ENST00000515531 PLPP5Q8NEB5 264 aa0.31□□□□□ -2.36
SMARCA5-203ENST00000515531 CYSLTR1Q9Y271 337 aa0.31□□□□□ -2.36
SMARCA5-203ENST00000515531 SBF1O95248 1867 aa0.31□□□□□ -2.36
SMARCA5-203ENST00000515531 HECW1Q76N89 1606 aa0.31□□□□□ -2.36
SMARCA5-203ENST00000515531 A0A087X0T9 212 aa0.3□□□□□ -2.36
SMARCA5-203ENST00000515531 TRAV26-2A0A0B4J265 109 aa0.3□□□□□ -2.36
SMARCA5-203ENST00000515531 CASP1P29466 404 aa0.3□□□□□ -2.36
SMARCA5-203ENST00000515531 ANP32AP39687 249 aaKnown RBP0.3□□□□□ -2.36
SMARCA5-203ENST00000515531 CDKL4Q5MAI5 379 aa0.3□□□□□ -2.36
SMARCA5-203ENST00000515531 OR2T10Q8NGZ9 312 aa0.3□□□□□ -2.36
SMARCA5-203ENST00000515531 HIST1H2BLQ99880 126 aa0.3□□□□□ -2.36
SMARCA5-203ENST00000515531 TLNRD1Q9H1K6 362 aa0.3□□□□□ -2.36
SMARCA5-203ENST00000515531 MRPL27Q9P0M9 148 aaKnown RBP0.3□□□□□ -2.36
SMARCA5-203ENST00000515531 HECW2Q9P2P5 1572 aa0.29□□□□□ -2.36
SMARCA5-203ENST00000515531 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP0.29□□□□□ -2.36
SMARCA5-203ENST00000515531 CCL16O15467 120 aa0.29□□□□□ -2.36
SMARCA5-203ENST00000515531 CHP2O43745 196 aa0.29□□□□□ -2.36
SMARCA5-203ENST00000515531 IFNA5P01569 189 aa0.29□□□□□ -2.36
SMARCA5-203ENST00000515531 COTL1Q14019 142 aa0.29□□□□□ -2.36
SMARCA5-203ENST00000515531 TSNQ15631 228 aaKnown RBP0.29□□□□□ -2.36
SMARCA5-203ENST00000515531 TMEM254Q8TBM7 123 aa0.29□□□□□ -2.36
SMARCA5-203ENST00000515531 UTP11Q9Y3A2 253 aaKnown RBP0.29□□□□□ -2.36
SMARCA5-203ENST00000515531 NEO1Q92859 1461 aa0.29□□□□□ -2.36
SMARCA5-203ENST00000515531 KCPQ6ZWJ8 1503 aa0.28□□□□□ -2.36
SMARCA5-203ENST00000515531 MED1Q15648 1581 aaPredicted RBP0.28□□□□□ -2.36
SMARCA5-203ENST00000515531 MUC5ACP98088 5654 aa0.28□□□□□ -2.36
SMARCA5-203ENST00000515531 NKX2-5P52952 324 aaPredicted RBP0.28□□□□□ -2.36
SMARCA5-203ENST00000515531 RHOBP62745 196 aa0.28□□□□□ -2.36
SMARCA5-203ENST00000515531 ST6GALNAC3Q8NDV1 305 aa0.28□□□□□ -2.36
SMARCA5-203ENST00000515531 VPS29Q9UBQ0 182 aa0.28□□□□□ -2.36
SMARCA5-203ENST00000515531 DOCK3Q8IZD9 2030 aa0.28□□□□□ -2.37
SMARCA5-203ENST00000515531 SCN3AQ9NY46 2000 aa0.27□□□□□ -2.37
SMARCA5-203ENST00000515531 C1orf196B1AJZ1 125 aa0.27□□□□□ -2.37
SMARCA5-203ENST00000515531 M0R036 132 aa0.27□□□□□ -2.37
SMARCA5-203ENST00000515531 KLF7O75840 302 aaPredicted RBP0.27□□□□□ -2.37
SMARCA5-203ENST00000515531 IFNA16P05015 189 aa0.27□□□□□ -2.37
SMARCA5-203ENST00000515531 CMSS1Q9BQ75 279 aaKnown RBP0.27□□□□□ -2.37
SMARCA5-203ENST00000515531 TLCD2A6NGC4 264 aa0.26□□□□□ -2.37
SMARCA5-203ENST00000515531 AHSA1O95433 338 aa0.26□□□□□ -2.37
SMARCA5-203ENST00000515531 IGLV3-1P01715 115 aa0.26□□□□□ -2.37
SMARCA5-203ENST00000515531 TTRP02766 147 aa0.26□□□□□ -2.37
SMARCA5-203ENST00000515531 LINC00575Q6W349 94 aa0.26□□□□□ -2.37
SMARCA5-203ENST00000515531 OR11H6Q8NGC7 330 aa0.26□□□□□ -2.37
SMARCA5-203ENST00000515531 OR8D4Q8NGM9 314 aa0.26□□□□□ -2.37
SMARCA5-203ENST00000515531 BCL2L10Q9HD36 194 aa0.26□□□□□ -2.37
SMARCA5-203ENST00000515531 C14orf105Q9NVL8 296 aa0.26□□□□□ -2.37
SMARCA5-203ENST00000515531 UBAP1Q9NZ09 502 aa0.26□□□□□ -2.37
SMARCA5-203ENST00000515531 KMT2DO14686 5537 aa0.26□□□□□ -2.37
SMARCA5-203ENST00000515531 IGHV1-58A0A0C4DH39 117 aa0.25□□□□□ -2.37
SMARCA5-203ENST00000515531 DHFRP00374 187 aa0.25□□□□□ -2.37
SMARCA5-203ENST00000515531 WFDC5Q8TCV5 224 aa0.25□□□□□ -2.37
SMARCA5-203ENST00000515531 DDI1Q8WTU0 396 aa0.25□□□□□ -2.37
SMARCA5-203ENST00000515531 C8orf76Q96K31 380 aa0.25□□□□□ -2.37
SMARCA5-203ENST00000515531 C2orf50Q96LR7 162 aa0.25□□□□□ -2.37
SMARCA5-203ENST00000515531 PRRT1Q99946 306 aa0.25□□□□□ -2.37
SMARCA5-203ENST00000515531 TAS2R7Q9NYW3 318 aa0.25□□□□□ -2.37
SMARCA5-203ENST00000515531 ORMDL1Q9P0S3 153 aa0.25□□□□□ -2.37
SMARCA5-203ENST00000515531 TNFSF18Q9UNG2 199 aa0.25□□□□□ -2.37
SMARCA5-203ENST00000515531 APCP25054 2843 aa0.25□□□□□ -2.37
SMARCA5-203ENST00000515531 ROBO3Q96MS0 1386 aa0.24□□□□□ -2.37
SMARCA5-203ENST00000515531 FAM236DA0A1B0GTK5 79 aa0.24□□□□□ -2.37
SMARCA5-203ENST00000515531 TCRBV4S1A1TA0A5B7 111 aa0.24□□□□□ -2.37
SMARCA5-203ENST00000515531 NUPR1O60356 82 aa0.24□□□□□ -2.37
SMARCA5-203ENST00000515531 GADD45GO95257 159 aa0.24□□□□□ -2.37
SMARCA5-203ENST00000515531 ZNF682O95780 498 aa0.24□□□□□ -2.37
SMARCA5-203ENST00000515531 FAM236CP0DP71 79 aa0.24□□□□□ -2.37
SMARCA5-203ENST00000515531 SPINK9Q5DT21 86 aa0.24□□□□□ -2.37
SMARCA5-203ENST00000515531 GDPD1Q8N9F7 314 aa0.24□□□□□ -2.37
SMARCA5-203ENST00000515531 MAST4O15021 2626 aa0.24□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms