RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 OR10J1P30954 320 aa8.53□□□□□ -1.04
VCAN-212ENST00000515397 SRPXP78539 464 aa8.53□□□□□ -1.04
VCAN-212ENST00000515397 GGNBP1Q5YKI7 109 aa8.53□□□□□ -1.04
VCAN-212ENST00000515397 FAM24BQ8N5W8 94 aa8.53□□□□□ -1.04
VCAN-212ENST00000515397 RNASEH2CQ8TDP1 164 aaKnown RBP8.53□□□□□ -1.04
VCAN-212ENST00000515397 GINS3Q9BRX5 216 aa8.53□□□□□ -1.04
VCAN-212ENST00000515397 GGTLC1Q9BX51 225 aa8.53□□□□□ -1.04
VCAN-212ENST00000515397 EDA2RQ9HAV5 297 aa8.53□□□□□ -1.04
VCAN-212ENST00000515397 TENM2Q9NT68 2774 aa8.53□□□□□ -1.04
VCAN-212ENST00000515397 RPS10-NUDT3A0A1W2PQS6 291 aa8.52□□□□□ -1.05
VCAN-212ENST00000515397 C9orf170A2RU37 121 aa8.52□□□□□ -1.05
VCAN-212ENST00000515397 OR4C46A6NHA9 309 aa8.52□□□□□ -1.05
VCAN-212ENST00000515397 WRBO00258 174 aa8.52□□□□□ -1.05
VCAN-212ENST00000515397 PLA2G10O15496 165 aa8.52□□□□□ -1.05
VCAN-212ENST00000515397 PITX3O75364 302 aa8.52□□□□□ -1.05
VCAN-212ENST00000515397 NDUFB6O95139 128 aa8.52□□□□□ -1.05
VCAN-212ENST00000515397 LYL1P12980 280 aa8.52□□□□□ -1.05
VCAN-212ENST00000515397 NPPCP23582 126 aa8.52□□□□□ -1.05
VCAN-212ENST00000515397 BTCP35070 178 aa8.52□□□□□ -1.05
VCAN-212ENST00000515397 CASC10Q5T4H9 136 aa8.52□□□□□ -1.05
VCAN-212ENST00000515397 GSG1LQ6UXU4 331 aa8.52□□□□□ -1.05
VCAN-212ENST00000515397 MS4A6AQ9H2W1 248 aa8.52□□□□□ -1.05
VCAN-212ENST00000515397 VSIRQ9H7M9 311 aa8.52□□□□□ -1.05
VCAN-212ENST00000515397 NDUFA13Q9P0J0 144 aa8.52□□□□□ -1.05
VCAN-212ENST00000515397 U3KQ87 197 aa8.52□□□□□ -1.05
VCAN-212ENST00000515397 CSMD3Q7Z407 3707 aa8.51□□□□□ -1.05
VCAN-212ENST00000515397 C3orf84H3BNL1 204 aa8.51□□□□□ -1.05
VCAN-212ENST00000515397 DNASE2O00115 360 aaPredicted RBP8.51□□□□□ -1.05
VCAN-212ENST00000515397 UBE2MP61081 183 aaKnown RBP8.51□□□□□ -1.05
VCAN-212ENST00000515397 LEMD1Q68G75 181 aa8.51□□□□□ -1.05
VCAN-212ENST00000515397 LRTM2Q8N967 370 aa8.51□□□□□ -1.05
VCAN-212ENST00000515397 Q8WTZ3 238 aa8.51□□□□□ -1.05
VCAN-212ENST00000515397 METTL26Q96S19 204 aa8.51□□□□□ -1.05
VCAN-212ENST00000515397 OVOL2Q9BRP0 275 aa8.51□□□□□ -1.05
VCAN-212ENST00000515397 RABAC1Q9UI14 185 aa8.51□□□□□ -1.05
VCAN-212ENST00000515397 TRAV30A0A087WSZ9 112 aa8.5□□□□□ -1.05
VCAN-212ENST00000515397 NAP1L6A6NFF2 107 aa8.5□□□□□ -1.05
VCAN-212ENST00000515397 H3BP45 60 aa8.5□□□□□ -1.05
VCAN-212ENST00000515397 IL4P05112 153 aa8.5□□□□□ -1.05
VCAN-212ENST00000515397 OR4E1P0C645 316 aa8.5□□□□□ -1.05
VCAN-212ENST00000515397 SLC25A4P12235 298 aa8.5□□□□□ -1.05
VCAN-212ENST00000515397 CRYBB3P26998 211 aa8.5□□□□□ -1.05
VCAN-212ENST00000515397 P2RY1P47900 373 aa8.5□□□□□ -1.05
VCAN-212ENST00000515397 ZNF90Q03938 601 aa8.5□□□□□ -1.05
VCAN-212ENST00000515397 DHRS2Q13268 280 aa8.5□□□□□ -1.05
VCAN-212ENST00000515397 GAMTQ14353 236 aa8.5□□□□□ -1.05
VCAN-212ENST00000515397 USF2Q15853 346 aaPredicted RBP8.5□□□□□ -1.05
VCAN-212ENST00000515397 C4orf46Q504U0 113 aa8.5□□□□□ -1.05
VCAN-212ENST00000515397 STXBP6Q8NFX7 210 aa8.5□□□□□ -1.05
VCAN-212ENST00000515397 OR1S2Q8NGQ3 325 aa8.5□□□□□ -1.05
VCAN-212ENST00000515397 DEDD2Q8WXF8 326 aa8.5□□□□□ -1.05
VCAN-212ENST00000515397 MAP6D1Q9H9H5 199 aa8.5□□□□□ -1.05
VCAN-212ENST00000515397 DUXBA0A1W2PPF3 345 aa8.49□□□□□ -1.05
VCAN-212ENST00000515397 CENPXA8MT69 81 aa8.49□□□□□ -1.05
VCAN-212ENST00000515397 RD3LP0DJH9 198 aa8.49□□□□□ -1.05
VCAN-212ENST00000515397 PSG1P11464 419 aa8.49□□□□□ -1.05
VCAN-212ENST00000515397 DEFB131AP59861 70 aa8.49□□□□□ -1.05
VCAN-212ENST00000515397 POLR2GP62487 172 aaKnown RBP eCLIP8.49□□□□□ -1.05
VCAN-212ENST00000515397 PAFAH1B2P68402 229 aa8.49□□□□□ -1.05
VCAN-212ENST00000515397 OR2F1Q13607 317 aa8.49□□□□□ -1.05
VCAN-212ENST00000515397 DEFB135Q30KP9 77 aa8.49□□□□□ -1.05
VCAN-212ENST00000515397 SPANXN5Q5MJ07 72 aa8.49□□□□□ -1.05
VCAN-212ENST00000515397 ETFRF1Q6IPR1 90 aa8.49□□□□□ -1.05
VCAN-212ENST00000515397 LYG2Q86SG7 212 aa8.49□□□□□ -1.05
VCAN-212ENST00000515397 NOXA1Q86UR1 476 aa8.49□□□□□ -1.05
VCAN-212ENST00000515397 OR51G1Q8NGK1 321 aa8.49□□□□□ -1.05
VCAN-212ENST00000515397 PBDC1Q9BVG4 233 aa8.49□□□□□ -1.05
VCAN-212ENST00000515397 TMED3Q9Y3Q3 217 aa8.49□□□□□ -1.05
VCAN-212ENST00000515397 IGKV1D-37A0A075B6S9 117 aa8.48□□□□□ -1.05
VCAN-212ENST00000515397 TRAV6A0A075B6T7 132 aa8.48□□□□□ -1.05
VCAN-212ENST00000515397 ZFP92A6NM28 416 aa8.48□□□□□ -1.05
VCAN-212ENST00000515397 SYNGR2O43760 224 aa8.48□□□□□ -1.05
VCAN-212ENST00000515397 YPEL3P61236 119 aaPredicted RBP8.48□□□□□ -1.05
VCAN-212ENST00000515397 CNPY1Q3B7I2 92 aa8.48□□□□□ -1.05
VCAN-212ENST00000515397 CACFD1Q9UGQ2 172 aa8.48□□□□□ -1.05
VCAN-212ENST00000515397 U3KQE9 123 aa8.48□□□□□ -1.05
VCAN-212ENST00000515397 AGRNO00468 2067 aa8.47□□□□□ -1.05
VCAN-212ENST00000515397 STARD9Q9P2P6 4700 aa8.47□□□□□ -1.05
VCAN-212ENST00000515397 A0A1W2PS18 150 aa8.47□□□□□ -1.05
VCAN-212ENST00000515397 KNCNA6PVL3 124 aa8.47□□□□□ -1.05
VCAN-212ENST00000515397 CCSO14618 274 aa8.47□□□□□ -1.05
VCAN-212ENST00000515397 LYRM1O43325 122 aa8.47□□□□□ -1.05
VCAN-212ENST00000515397 SPRY2O43597 315 aa8.47□□□□□ -1.05
VCAN-212ENST00000515397 SCGB2A1O75556 95 aa8.47□□□□□ -1.05
VCAN-212ENST00000515397 MED6O75586 246 aa8.47□□□□□ -1.05
VCAN-212ENST00000515397 TOMM40O96008 361 aa8.47□□□□□ -1.05
VCAN-212ENST00000515397 HNRNPCP07910 306 aaKnown RBP eCLIP8.47□□□□□ -1.05
VCAN-212ENST00000515397 ZNF688P0C7X2 276 aa8.47□□□□□ -1.05
VCAN-212ENST00000515397 SLC25A6P12236 298 aa8.47□□□□□ -1.05
VCAN-212ENST00000515397 BMI1P35226 326 aa8.47□□□□□ -1.05
VCAN-212ENST00000515397 GPX4P36969 197 aaPredicted RBP8.47□□□□□ -1.05
VCAN-212ENST00000515397 RAB11AP62491 216 aa8.47□□□□□ -1.05
VCAN-212ENST00000515397 EWSR1Q01844 656 aaKnown RBP eCLIP8.47□□□□□ -1.05
VCAN-212ENST00000515397 STPG3Q8N7X2 389 aa8.47□□□□□ -1.05
VCAN-212ENST00000515397 COQ8AQ8NI60 647 aa8.47□□□□□ -1.05
VCAN-212ENST00000515397 SLC35E1Q96K37 410 aa8.47□□□□□ -1.05
VCAN-212ENST00000515397 SEC22CQ9BRL7 303 aa8.47□□□□□ -1.05
VCAN-212ENST00000515397 TMEM231Q9H6L2 316 aa8.47□□□□□ -1.05
VCAN-212ENST00000515397 GSKIPQ9P0R6 139 aa8.47□□□□□ -1.05
VCAN-212ENST00000515397 RYR3Q15413 4870 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 111.8 ms