RNA–Protein interactions for RNA: ENST00000515266.1

MBD4-210, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 2

Gene MBD4, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-210ENST00000515266 SPINK7P58062 85 aa-0.11□□□□□ -2.43
MBD4-210ENST00000515266 GRINAQ7Z429 371 aa-0.11□□□□□ -2.43
MBD4-210ENST00000515266 C20orf196Q8IYI0 205 aa-0.11□□□□□ -2.43
MBD4-210ENST00000515266 GPR146Q96CH1 333 aa-0.11□□□□□ -2.43
MBD4-210ENST00000515266 PRRT1Q99946 306 aa-0.11□□□□□ -2.43
MBD4-210ENST00000515266 OSTCQ9NRP0 149 aa-0.11□□□□□ -2.43
MBD4-210ENST00000515266 SLC35A3Q9Y2D2 325 aa-0.11□□□□□ -2.43
MBD4-210ENST00000515266 LSM5Q9Y4Y9 91 aaKnown RBP-0.11□□□□□ -2.43
MBD4-210ENST00000515266 OTOGQ6ZRI0 2925 aa-0.11□□□□□ -2.43
MBD4-210ENST00000515266 CACNA1CQ13936 2221 aa-0.11□□□□□ -2.43
MBD4-210ENST00000515266 ASXL3Q9C0F0 2248 aa-0.11□□□□□ -2.43
MBD4-210ENST00000515266 ANK2Q01484 3957 aa-0.12□□□□□ -2.43
MBD4-210ENST00000515266 ABCA2Q9BZC7 2435 aa-0.12□□□□□ -2.43
MBD4-210ENST00000515266 HIVEP1P15822 2718 aa-0.12□□□□□ -2.43
MBD4-210ENST00000515266 LRP1Q07954 4544 aaKnown RBP-0.12□□□□□ -2.43
MBD4-210ENST00000515266 TRAV9-1A0A075B6T8 112 aa-0.12□□□□□ -2.43
MBD4-210ENST00000515266 EXOC1LA0A1B0GW35 172 aa-0.12□□□□□ -2.43
MBD4-210ENST00000515266 TRBV6-4A0A1B0GX49 114 aa-0.12□□□□□ -2.43
MBD4-210ENST00000515266 KLF7O75840 302 aaPredicted RBP-0.12□□□□□ -2.43
MBD4-210ENST00000515266 OR2J2O76002 312 aa-0.12□□□□□ -2.43
MBD4-210ENST00000515266 ISG15P05161 165 aa-0.12□□□□□ -2.43
MBD4-210ENST00000515266 HIST1H1TP22492 207 aaPredicted RBP-0.12□□□□□ -2.43
MBD4-210ENST00000515266 SNRPD2P62316 118 aaKnown RBP-0.12□□□□□ -2.43
MBD4-210ENST00000515266 LPCAT3Q6P1A2 487 aa-0.12□□□□□ -2.43
MBD4-210ENST00000515266 KRTAP26-1Q6PEX3 210 aa-0.12□□□□□ -2.43
MBD4-210ENST00000515266 NABP2Q9BQ15 211 aa-0.12□□□□□ -2.43
MBD4-210ENST00000515266 COMMD5Q9GZQ3 224 aa-0.12□□□□□ -2.43
MBD4-210ENST00000515266 NHP2Q9NX24 153 aaKnown RBP-0.12□□□□□ -2.43
MBD4-210ENST00000515266 TMEM14CQ9P0S9 112 aa-0.12□□□□□ -2.43
MBD4-210ENST00000515266 V9GYY5 206 aaPredicted RBP-0.12□□□□□ -2.43
MBD4-210ENST00000515266 F8P00451 2351 aa-0.12□□□□□ -2.43
MBD4-210ENST00000515266 C9orf84Q5VXU9 1444 aa-0.13□□□□□ -2.43
MBD4-210ENST00000515266 PEAK1Q9H792 1746 aa-0.13□□□□□ -2.43
MBD4-210ENST00000515266 TET1Q8NFU7 2136 aa-0.13□□□□□ -2.43
MBD4-210ENST00000515266 FAM208BQ5VWN6 2430 aa-0.13□□□□□ -2.43
MBD4-210ENST00000515266 RYR3Q15413 4870 aa-0.13□□□□□ -2.43
MBD4-210ENST00000515266 TENM4Q6N022 2769 aa-0.13□□□□□ -2.43
MBD4-210ENST00000515266 TLCD2A6NGC4 264 aa-0.13□□□□□ -2.43
MBD4-210ENST00000515266 RPS20P60866 119 aaKnown RBP-0.13□□□□□ -2.43
MBD4-210ENST00000515266 FAM74A1Q5RGS3 127 aa-0.13□□□□□ -2.43
MBD4-210ENST00000515266 HIST2H3PS2Q5TEC6 136 aa-0.13□□□□□ -2.43
MBD4-210ENST00000515266 SPINK6Q6UWN8 80 aa-0.13□□□□□ -2.43
MBD4-210ENST00000515266 PPP1R2P1Q96PQ5 205 aa-0.13□□□□□ -2.43
MBD4-210ENST00000515266 DRC3Q9H069 523 aa-0.13□□□□□ -2.43
MBD4-210ENST00000515266 DCSTAMPQ9H295 470 aa-0.13□□□□□ -2.43
MBD4-210ENST00000515266 OR51V1Q9H2C8 321 aa-0.13□□□□□ -2.43
MBD4-210ENST00000515266 TMEM56-RWDD3S4R434 201 aa-0.13□□□□□ -2.43
MBD4-210ENST00000515266 CELSR1Q9NYQ6 3014 aa-0.13□□□□□ -2.43
MBD4-210ENST00000515266 FLNAP21333 2647 aaKnown RBP-0.13□□□□□ -2.43
MBD4-210ENST00000515266 UBR4Q5T4S7 5183 aa-0.13□□□□□ -2.43
MBD4-210ENST00000515266 MUC4Q99102 2169 aa-0.13□□□□□ -2.43
MBD4-210ENST00000515266 EML6Q6ZMW3 1958 aa-0.14□□□□□ -2.43
MBD4-210ENST00000515266 ALPK3Q96L96 1907 aa-0.14□□□□□ -2.43
MBD4-210ENST00000515266 DCTN3O75935 186 aa-0.14□□□□□ -2.43
MBD4-210ENST00000515266 ESRGQ1W209 222 aa-0.14□□□□□ -2.43
MBD4-210ENST00000515266 LINC01554Q52M75 96 aa-0.14□□□□□ -2.43
MBD4-210ENST00000515266 BRMS1LQ5PSV4 323 aa-0.14□□□□□ -2.43
MBD4-210ENST00000515266 EXOC3-AS1Q8N2X6 119 aa-0.14□□□□□ -2.43
MBD4-210ENST00000515266 ANKRD29Q8N6D5 301 aa-0.14□□□□□ -2.43
MBD4-210ENST00000515266 PLPP5Q8NEB5 264 aa-0.14□□□□□ -2.43
MBD4-210ENST00000515266 TSPAN32Q96QS1 320 aa-0.14□□□□□ -2.43
MBD4-210ENST00000515266 USE1Q9NZ43 259 aa-0.14□□□□□ -2.43
MBD4-210ENST00000515266 PKIGQ9Y2B9 76 aa-0.14□□□□□ -2.43
MBD4-210ENST00000515266 CHCHD2Q9Y6H1 151 aaPredicted RBP-0.14□□□□□ -2.43
MBD4-210ENST00000515266 RALGAPA2Q2PPJ7 1873 aa-0.14□□□□□ -2.43
MBD4-210ENST00000515266 ABCA13Q86UQ4 5058 aa-0.15□□□□□ -2.43
MBD4-210ENST00000515266 NUP155O75694 1391 aa-0.15□□□□□ -2.43
MBD4-210ENST00000515266 POLQO75417 2590 aa-0.15□□□□□ -2.43
MBD4-210ENST00000515266 M0R378 163 aa-0.15□□□□□ -2.43
MBD4-210ENST00000515266 PSMD12O00232 456 aaPredicted RBP-0.15□□□□□ -2.43
MBD4-210ENST00000515266 KDELR1P24390 212 aa-0.15□□□□□ -2.43
MBD4-210ENST00000515266 RPL5P46777 297 aaKnown RBP-0.15□□□□□ -2.43
MBD4-210ENST00000515266 AP2S1P53680 142 aaPredicted RBP-0.15□□□□□ -2.43
MBD4-210ENST00000515266 KRTAP20-1Q3LI63 56 aa-0.15□□□□□ -2.43
MBD4-210ENST00000515266 LINC00575Q6W349 94 aa-0.15□□□□□ -2.43
MBD4-210ENST00000515266 TRAPPC6BQ86SZ2 158 aa-0.15□□□□□ -2.43
MBD4-210ENST00000515266 LINC00301Q8NCQ3 95 aa-0.15□□□□□ -2.43
MBD4-210ENST00000515266 OR8D4Q8NGM9 314 aa-0.15□□□□□ -2.43
MBD4-210ENST00000515266 TEX47Q8TBZ9 253 aa-0.15□□□□□ -2.43
MBD4-210ENST00000515266 OR52E6Q96RD3 313 aa-0.15□□□□□ -2.43
MBD4-210ENST00000515266 C20orf27Q9GZN8 174 aa-0.15□□□□□ -2.43
MBD4-210ENST00000515266 CACNA1HO95180 2353 aa-0.15□□□□□ -2.43
MBD4-210ENST00000515266 MYO3BQ8WXR4 1341 aa-0.15□□□□□ -2.43
MBD4-210ENST00000515266 USH2AO75445 5202 aa-0.16□□□□□ -2.43
MBD4-210ENST00000515266 ZNF106Q9H2Y7 1883 aaKnown RBP-0.16□□□□□ -2.43
MBD4-210ENST00000515266 KIAA1109Q2LD37 5005 aa-0.16□□□□□ -2.43
MBD4-210ENST00000515266 DENND4CQ5VZ89 1909 aa-0.16□□□□□ -2.43
MBD4-210ENST00000515266 TGIF2-C20orf24A0A0A6YYL0 155 aa-0.16□□□□□ -2.44
MBD4-210ENST00000515266 IGHV1-58A0A0C4DH39 117 aa-0.16□□□□□ -2.44
MBD4-210ENST00000515266 C7orf71A4D174 169 aa-0.16□□□□□ -2.44
MBD4-210ENST00000515266 K7EIL1 84 aa-0.16□□□□□ -2.44
MBD4-210ENST00000515266 TGOLN2O43493 480 aa-0.16□□□□□ -2.44
MBD4-210ENST00000515266 NUPR1O60356 82 aa-0.16□□□□□ -2.44
MBD4-210ENST00000515266 IGLV3-1P01715 115 aa-0.16□□□□□ -2.44
MBD4-210ENST00000515266 OR4E1P0C645 316 aa-0.16□□□□□ -2.44
MBD4-210ENST00000515266 HOXA6P31267 233 aa-0.16□□□□□ -2.44
MBD4-210ENST00000515266 DEFA1P59665 94 aa-0.16□□□□□ -2.44
MBD4-210ENST00000515266 PSME3P61289 254 aa-0.16□□□□□ -2.44
MBD4-210ENST00000515266 OR2F1Q13607 317 aa-0.16□□□□□ -2.44
MBD4-210ENST00000515266 HIST3H3Q16695 136 aa-0.16□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms