RNA–Protein interactions for RNA: ENST00000515144.5

TRIO-222, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 1 (best)

Gene TRIO, Length 7,455 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-222ENST00000515144 EVI2AP22794 236 aa11.91□□□□□ -0.5
TRIO-222ENST00000515144 MALRD1Q5VYJ5 2156 aa11.91□□□□□ -0.5
TRIO-222ENST00000515144 DPRXA6NFQ7 191 aa11.91□□□□□ -0.5
TRIO-222ENST00000515144 RPS20P60866 119 aaKnown RBP11.91□□□□□ -0.5
TRIO-222ENST00000515144 C5orf63A6NC05 138 aa11.9□□□□□ -0.5
TRIO-222ENST00000515144 SLC17A3O00476 420 aa11.9□□□□□ -0.5
TRIO-222ENST00000515144 HSPB9Q9BQS6 159 aa11.9□□□□□ -0.5
TRIO-222ENST00000515144 IGHV1-3A0A0C4DH29 117 aa11.9□□□□□ -0.5
TRIO-222ENST00000515144 TGIF2-C20orf24A0A0A6YYL0 155 aa11.9□□□□□ -0.5
TRIO-222ENST00000515144 IGKV1-9A0A0C4DH69 117 aa11.9□□□□□ -0.5
TRIO-222ENST00000515144 OR9G9P0C7N8 305 aa11.9□□□□□ -0.5
TRIO-222ENST00000515144 CD177Q8N6Q3 437 aa11.9□□□□□ -0.5
TRIO-222ENST00000515144 A0A0A6YYD4 124 aa11.9□□□□□ -0.51
TRIO-222ENST00000515144 J3QR89 54 aa11.9□□□□□ -0.51
TRIO-222ENST00000515144 CRPP02741 224 aa11.9□□□□□ -0.51
TRIO-222ENST00000515144 SRIP30626 198 aa11.89□□□□□ -0.51
TRIO-222ENST00000515144 MBNL3Q9NUK0 354 aaKnown RBP11.89□□□□□ -0.51
TRIO-222ENST00000515144 IGLV3-32A0A0A0MS00 114 aa11.89□□□□□ -0.51
TRIO-222ENST00000515144 FOXA3P55318 350 aaPredicted RBP11.89□□□□□ -0.51
TRIO-222ENST00000515144 Q5BKY6 102 aa11.89□□□□□ -0.51
TRIO-222ENST00000515144 TMEM42Q69YG0 159 aa11.89□□□□□ -0.51
TRIO-222ENST00000515144 CLPSP04118 112 aa11.89□□□□□ -0.51
TRIO-222ENST00000515144 TPTE2P1Q5T6R2 138 aa11.89□□□□□ -0.51
TRIO-222ENST00000515144 REC114Q7Z4M0 266 aa11.89□□□□□ -0.51
TRIO-222ENST00000515144 RPUSD1Q9UJJ7 312 aaKnown RBP11.89□□□□□ -0.51
TRIO-222ENST00000515144 NDUFA3O95167 84 aa11.89□□□□□ -0.51
TRIO-222ENST00000515144 TRGC2P03986 189 aa11.89□□□□□ -0.51
TRIO-222ENST00000515144 NPIPB7O75200 414 aa11.89□□□□□ -0.51
TRIO-222ENST00000515144 ZNF345Q14585 488 aa11.89□□□□□ -0.51
TRIO-222ENST00000515144 RNASEH2CQ8TDP1 164 aaKnown RBP11.89□□□□□ -0.51
TRIO-222ENST00000515144 RTBDNQ9BSG5 229 aaPredicted RBP11.89□□□□□ -0.51
TRIO-222ENST00000515144 PTPN13Q12923 2485 aa11.89□□□□□ -0.51
TRIO-222ENST00000515144 UPK2O00526 184 aa11.89□□□□□ -0.51
TRIO-222ENST00000515144 F8VVB4 439 aa11.88□□□□□ -0.51
TRIO-222ENST00000515144 F8VWA3 439 aa11.88□□□□□ -0.51
TRIO-222ENST00000515144 UCP3P55916 312 aa11.88□□□□□ -0.51
TRIO-222ENST00000515144 C17orf82Q86X59 251 aaPredicted RBP11.88□□□□□ -0.51
TRIO-222ENST00000515144 MSMBP08118 114 aa11.88□□□□□ -0.51
TRIO-222ENST00000515144 C1orf122Q6ZSJ8 110 aa11.88□□□□□ -0.51
TRIO-222ENST00000515144 SHISA3A0PJX4 238 aa11.88□□□□□ -0.51
TRIO-222ENST00000515144 CSRP3P50461 194 aa11.88□□□□□ -0.51
TRIO-222ENST00000515144 NRGNQ92686 78 aa11.88□□□□□ -0.51
TRIO-222ENST00000515144 LTBP2Q14767 1821 aa11.88□□□□□ -0.51
TRIO-222ENST00000515144 IGKV2-40A0A087WW87 121 aaPredicted RBP11.88□□□□□ -0.51
TRIO-222ENST00000515144 MBD3L4A6NDZ8 208 aaPredicted RBP11.88□□□□□ -0.51
TRIO-222ENST00000515144 MBD3L3A6NE82 208 aaPredicted RBP11.88□□□□□ -0.51
TRIO-222ENST00000515144 MBD3L5A6NJ08 208 aaPredicted RBP11.88□□□□□ -0.51
TRIO-222ENST00000515144 FCN3O75636 299 aa11.88□□□□□ -0.51
TRIO-222ENST00000515144 IGKV2D-40P01614 121 aaPredicted RBP11.88□□□□□ -0.51
TRIO-222ENST00000515144 PYYP10082 97 aa11.88□□□□□ -0.51
TRIO-222ENST00000515144 ZNF25P17030 456 aaPredicted RBP11.88□□□□□ -0.51
TRIO-222ENST00000515144 IFITM3Q01628 133 aa11.88□□□□□ -0.51
TRIO-222ENST00000515144 CFHR3Q02985 330 aa11.88□□□□□ -0.51
TRIO-222ENST00000515144 MBD3L2Q8NHZ7 208 aaPredicted RBP11.88□□□□□ -0.51
TRIO-222ENST00000515144 RNF125Q96EQ8 232 aa11.88□□□□□ -0.51
TRIO-222ENST00000515144 C15orf61A6NNL5 157 aa11.88□□□□□ -0.51
TRIO-222ENST00000515144 AGAP20933 346 aa11.88□□□□□ -0.51
TRIO-222ENST00000515144 PRR32B1ATL7 298 aa11.88□□□□□ -0.51
TRIO-222ENST00000515144 LYRM7Q5U5X0 104 aa11.88□□□□□ -0.51
TRIO-222ENST00000515144 JKAMPQ9P055 326 aa11.87□□□□□ -0.51
TRIO-222ENST00000515144 COL4A3Q01955 1670 aa11.87□□□□□ -0.51
TRIO-222ENST00000515144 RPL24P83731 157 aaKnown RBP11.87□□□□□ -0.51
TRIO-222ENST00000515144 LRTM2Q8N967 370 aa11.87□□□□□ -0.51
TRIO-222ENST00000515144 TRAV12-3A0A0B4J271 114 aa11.87□□□□□ -0.51
TRIO-222ENST00000515144 BUB1B-PAK6H3BSN5 160 aa11.87□□□□□ -0.51
TRIO-222ENST00000515144 PSPNO60542 156 aa11.87□□□□□ -0.51
TRIO-222ENST00000515144 ATP5G3P48201 142 aa11.87□□□□□ -0.51
TRIO-222ENST00000515144 PLA2G2CQ5R387 149 aa11.87□□□□□ -0.51
TRIO-222ENST00000515144 TEX38Q6PEX7 206 aa11.87□□□□□ -0.51
TRIO-222ENST00000515144 SOX21Q9Y651 276 aaPredicted RBP11.87□□□□□ -0.51
TRIO-222ENST00000515144 RND3P61587 244 aa11.87□□□□□ -0.51
TRIO-222ENST00000515144 SAPCD1Q5SSQ6 148 aa11.87□□□□□ -0.51
TRIO-222ENST00000515144 TMEM70Q9BUB7 260 aa11.87□□□□□ -0.51
TRIO-222ENST00000515144 GAS1P54826 345 aa11.87□□□□□ -0.51
TRIO-222ENST00000515144 EFNB1P98172 346 aa11.87□□□□□ -0.51
TRIO-222ENST00000515144 ZNF250P15622 560 aa11.86□□□□□ -0.51
TRIO-222ENST00000515144 NBL1P41271 181 aa11.86□□□□□ -0.51
TRIO-222ENST00000515144 ASCL2Q99929 193 aa11.86□□□□□ -0.51
TRIO-222ENST00000515144 LY6G6EA0A0G2JKS1 128 aa11.86□□□□□ -0.51
TRIO-222ENST00000515144 LEPROTL1O95214 131 aa11.86□□□□□ -0.51
TRIO-222ENST00000515144 GPR61Q9BZJ8 451 aa11.86□□□□□ -0.51
TRIO-222ENST00000515144 U3KQA8 63 aa11.86□□□□□ -0.51
TRIO-222ENST00000515144 K7EM74 188 aa11.86□□□□□ -0.51
TRIO-222ENST00000515144 IGFL4Q6B9Z1 124 aa11.86□□□□□ -0.51
TRIO-222ENST00000515144 IGKV1-27A0A075B6S5 117 aa11.86□□□□□ -0.51
TRIO-222ENST00000515144 OR11H4Q8NGC9 324 aa11.86□□□□□ -0.51
TRIO-222ENST00000515144 NABP1Q96AH0 204 aa11.86□□□□□ -0.51
TRIO-222ENST00000515144 ARHGAP32A7KAX9 2087 aa11.86□□□□□ -0.51
TRIO-222ENST00000515144 IGHV3-64A0A075B6Q5 118 aa11.86□□□□□ -0.51
TRIO-222ENST00000515144 CBLN1P23435 193 aa11.86□□□□□ -0.51
TRIO-222ENST00000515144 SYNJ2BPP57105 145 aa11.86□□□□□ -0.51
TRIO-222ENST00000515144 FAM209BQ5JX69 171 aa11.85□□□□□ -0.51
TRIO-222ENST00000515144 GRNP28799 593 aaKnown RBP11.85□□□□□ -0.51
TRIO-222ENST00000515144 PRR31Q5SQ13 230 aa11.85□□□□□ -0.51
TRIO-222ENST00000515144 CD200R1LQ6Q8B3 271 aa11.85□□□□□ -0.51
TRIO-222ENST00000515144 LINC00469Q8N7U9 141 aa11.85□□□□□ -0.51
TRIO-222ENST00000515144 C19orf24Q9BVV8 132 aa11.85□□□□□ -0.51
TRIO-222ENST00000515144 ALX4Q9H161 411 aaPredicted RBP11.85□□□□□ -0.51
TRIO-222ENST00000515144 RNASE7Q9H1E1 156 aaKnown RBP11.85□□□□□ -0.51
TRIO-222ENST00000515144 H7C1H1 209 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 129.8 ms