RNA–Protein interactions for RNA: ENST00000514831.1

SMAD1-214, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-214ENST00000514831 FAM210BQ96KR6 192 aa16.33■□□□□ 0.2
SMAD1-214ENST00000514831 NRN1Q9NPD7 142 aa16.33■□□□□ 0.2
SMAD1-214ENST00000514831 A0A0G2JRQ6 117 aa16.32■□□□□ 0.2
SMAD1-214ENST00000514831 C3orf85A0A1B0GTC6 90 aa16.32■□□□□ 0.2
SMAD1-214ENST00000514831 TMEM189A5PLL7 270 aa16.32■□□□□ 0.2
SMAD1-214ENST00000514831 ZNF705FA8MVS1 300 aaPredicted RBP16.32■□□□□ 0.2
SMAD1-214ENST00000514831 M0QYG6 137 aa16.32■□□□□ 0.2
SMAD1-214ENST00000514831 APOA1P02647 267 aa16.32■□□□□ 0.2
SMAD1-214ENST00000514831 ZNF705DP0CH99 300 aaPredicted RBP16.32■□□□□ 0.2
SMAD1-214ENST00000514831 ZNF705BP0CI00 300 aaPredicted RBP16.32■□□□□ 0.2
SMAD1-214ENST00000514831 SPART-AS1P0CW21 52 aa16.32■□□□□ 0.2
SMAD1-214ENST00000514831 YPEL3P61236 119 aaPredicted RBP16.32■□□□□ 0.2
SMAD1-214ENST00000514831 Q8WTZ3 238 aa16.32■□□□□ 0.2
SMAD1-214ENST00000514831 IGLV2-18A0A075B6J9 118 aa16.31■□□□□ 0.2
SMAD1-214ENST00000514831 SMIM31A0A1B0GVY4 71 aa16.31■□□□□ 0.2
SMAD1-214ENST00000514831 IFNA21P01568 189 aa16.31■□□□□ 0.2
SMAD1-214ENST00000514831 HLA-DRB4P13762 266 aa16.31■□□□□ 0.2
SMAD1-214ENST00000514831 RND2P52198 227 aa16.31■□□□□ 0.2
SMAD1-214ENST00000514831 USF2Q15853 346 aaPredicted RBP16.31■□□□□ 0.2
SMAD1-214ENST00000514831 TRIM16LQ309B1 348 aa16.31■□□□□ 0.2
SMAD1-214ENST00000514831 AARDQ4LEZ3 155 aa16.31■□□□□ 0.2
SMAD1-214ENST00000514831 Q6ZRM9 215 aa16.31■□□□□ 0.2
SMAD1-214ENST00000514831 RRNAD1Q96FB5 475 aaKnown RBP16.31■□□□□ 0.2
SMAD1-214ENST00000514831 KRTAP4-5Q9BYR2 181 aa16.31■□□□□ 0.2
SMAD1-214ENST00000514831 HLA-DRB4X5D2U9 266 aa16.31■□□□□ 0.2
SMAD1-214ENST00000514831 NACAE9PAV3 2078 aa16.3■□□□□ 0.2
SMAD1-214ENST00000514831 SMIM9A6NGZ8 99 aa16.3■□□□□ 0.2
SMAD1-214ENST00000514831 SLC25A4P12235 298 aa16.3■□□□□ 0.2
SMAD1-214ENST00000514831 OR10J1P30954 320 aa16.3■□□□□ 0.2
SMAD1-214ENST00000514831 HTR2BP41595 481 aa16.3■□□□□ 0.2
SMAD1-214ENST00000514831 DHODHQ02127 395 aa16.3■□□□□ 0.2
SMAD1-214ENST00000514831 PRSS54Q6PEW0 395 aa16.3■□□□□ 0.2
SMAD1-214ENST00000514831 ZNF575Q86XF7 245 aa16.3■□□□□ 0.2
SMAD1-214ENST00000514831 ABCA13Q86UQ4 5058 aa16.29■□□□□ 0.2
SMAD1-214ENST00000514831 TEX48A0A1B0GUV7 120 aa16.29■□□□□ 0.2
SMAD1-214ENST00000514831 GSTZ1O43708 216 aaPredicted RBP16.29■□□□□ 0.2
SMAD1-214ENST00000514831 IL4P05112 153 aa16.29■□□□□ 0.2
SMAD1-214ENST00000514831 UCP1P25874 307 aa16.29■□□□□ 0.2
SMAD1-214ENST00000514831 SPCS3P61009 180 aa16.29■□□□□ 0.2
SMAD1-214ENST00000514831 LSM3P62310 102 aaKnown RBP16.29■□□□□ 0.2
SMAD1-214ENST00000514831 SOHLH1Q5JUK2 328 aa16.29■□□□□ 0.2
SMAD1-214ENST00000514831 SIGLEC15Q6ZMC9 328 aa16.29■□□□□ 0.2
SMAD1-214ENST00000514831 ARRDC1Q8N5I2 433 aa16.29■□□□□ 0.2
SMAD1-214ENST00000514831 RNASE11Q8TAA1 199 aaKnown RBP16.29■□□□□ 0.2
SMAD1-214ENST00000514831 COMMD3Q9UBI1 195 aa16.29■□□□□ 0.2
SMAD1-214ENST00000514831 BUB3O43684 328 aa16.28■□□□□ 0.2
SMAD1-214ENST00000514831 NKX2-1P43699 371 aaPredicted RBP16.28■□□□□ 0.2
SMAD1-214ENST00000514831 SP6Q3SY56 376 aa16.28■□□□□ 0.2
SMAD1-214ENST00000514831 C2orf83Q53S99 150 aa16.28■□□□□ 0.2
SMAD1-214ENST00000514831 RNASE10Q5GAN6 216 aaKnown RBP16.28■□□□□ 0.2
SMAD1-214ENST00000514831 OR52E5Q8NH55 327 aa16.28■□□□□ 0.2
SMAD1-214ENST00000514831 RNASEH2CQ8TDP1 164 aaKnown RBP16.28■□□□□ 0.2
SMAD1-214ENST00000514831 YIPF6Q96EC8 236 aa16.28■□□□□ 0.2
SMAD1-214ENST00000514831 EMP1P54849 157 aa16.27■□□□□ 0.2
SMAD1-214ENST00000514831 RNF212Q495C1 297 aa16.27■□□□□ 0.2
SMAD1-214ENST00000514831 FAM219AQ8IW50 185 aa16.27■□□□□ 0.2
SMAD1-214ENST00000514831 CCDC71LQ8N9Z2 235 aa16.27■□□□□ 0.2
SMAD1-214ENST00000514831 COPZ2Q9P299 210 aa16.27■□□□□ 0.2
SMAD1-214ENST00000514831 DKK2Q9UBU2 259 aa16.27■□□□□ 0.2
SMAD1-214ENST00000514831 RFNGQ9Y644 331 aa16.27■□□□□ 0.2
SMAD1-214ENST00000514831 B3GALNT1O75752 331 aa16.26■□□□□ 0.19
SMAD1-214ENST00000514831 ATP6V1G2O95670 118 aa16.26■□□□□ 0.19
SMAD1-214ENST00000514831 SLC24A4Q8NFF2 622 aa16.26■□□□□ 0.19
SMAD1-214ENST00000514831 HEYLQ9NQ87 328 aaPredicted RBP16.26■□□□□ 0.19
SMAD1-214ENST00000514831 TOMM40O96008 361 aa16.25■□□□□ 0.19
SMAD1-214ENST00000514831 ELK1P19419 428 aa16.25■□□□□ 0.19
SMAD1-214ENST00000514831 TBPP20226 339 aa16.25■□□□□ 0.19
SMAD1-214ENST00000514831 GDF5OSQ5U4N7 250 aa16.25■□□□□ 0.19
SMAD1-214ENST00000514831 FAM222AQ5U5X8 452 aa16.25■□□□□ 0.19
SMAD1-214ENST00000514831 NIPSNAP3BQ9BS92 247 aa16.25■□□□□ 0.19
SMAD1-214ENST00000514831 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.25■□□□□ 0.19
SMAD1-214ENST00000514831 CD3DP04234 171 aa16.24■□□□□ 0.19
SMAD1-214ENST00000514831 C1orf134Q5TEV5 83 aa16.24■□□□□ 0.19
SMAD1-214ENST00000514831 ETFRF1Q6IPR1 90 aa16.24■□□□□ 0.19
SMAD1-214ENST00000514831 ZFAND1Q8TCF1 268 aa16.24■□□□□ 0.19
SMAD1-214ENST00000514831 CLUHP3Q96NS8 147 aa16.24■□□□□ 0.19
SMAD1-214ENST00000514831 SAV1Q9H4B6 383 aaPredicted RBP16.24■□□□□ 0.19
SMAD1-214ENST00000514831 KLK11Q9UBX7 282 aa16.24■□□□□ 0.19
SMAD1-214ENST00000514831 IGHV3OR16-12A0A075B7B8 117 aa16.23■□□□□ 0.19
SMAD1-214ENST00000514831 OXA1LQ15070 435 aa16.23■□□□□ 0.19
SMAD1-214ENST00000514831 RNASE12Q5GAN4 147 aaKnown RBP16.23■□□□□ 0.19
SMAD1-214ENST00000514831 ZNF709Q8N972 641 aa16.23■□□□□ 0.19
SMAD1-214ENST00000514831 OR13C8Q8NGS7 320 aa16.23■□□□□ 0.19
SMAD1-214ENST00000514831 TMEM170AQ8WVE7 144 aa16.23■□□□□ 0.19
SMAD1-214ENST00000514831 TMEM222Q9H0R3 208 aa16.23■□□□□ 0.19
SMAD1-214ENST00000514831 HPGDSO60760 199 aa16.22■□□□□ 0.19
SMAD1-214ENST00000514831 NXPH3O95157 252 aa16.22■□□□□ 0.19
SMAD1-214ENST00000514831 CDS2O95674 445 aa16.22■□□□□ 0.19
SMAD1-214ENST00000514831 IGKV3-20P01619 116 aa16.22■□□□□ 0.19
SMAD1-214ENST00000514831 RD3LP0DJH9 198 aa16.22■□□□□ 0.19
SMAD1-214ENST00000514831 NUP62P37198 522 aaPredicted RBP16.22■□□□□ 0.19
SMAD1-214ENST00000514831 FXYD7P58549 80 aa16.22■□□□□ 0.19
SMAD1-214ENST00000514831 FOXI2Q6ZQN5 318 aa16.22■□□□□ 0.19
SMAD1-214ENST00000514831 NPIPB3Q92617 1050 aa16.22■□□□□ 0.19
SMAD1-214ENST00000514831 DEFB1P60022 68 aa16.21■□□□□ 0.19
SMAD1-214ENST00000514831 TERB2Q8NHR7 220 aa16.21■□□□□ 0.19
SMAD1-214ENST00000514831 LHFPL5Q8TAF8 219 aa16.21■□□□□ 0.19
SMAD1-214ENST00000514831 RBPMSQ93062 196 aaKnown RBP16.21■□□□□ 0.19
SMAD1-214ENST00000514831 ACY3Q96HD9 319 aa16.21■□□□□ 0.19
SMAD1-214ENST00000514831 MTFP1Q9UDX5 166 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms