RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 OR51B2Q9Y5P1 312 aa6.49□□□□□ -1.37
CCL28-204ENST00000514421 RFNGQ9Y644 331 aa6.49□□□□□ -1.37
CCL28-204ENST00000514421 PKD1L1Q8TDX9 2849 aa6.49□□□□□ -1.37
CCL28-204ENST00000514421 C9JQL5 133 aa6.48□□□□□ -1.37
CCL28-204ENST00000514421 RBMXL2O75526 392 aaKnown RBP6.48□□□□□ -1.37
CCL28-204ENST00000514421 MBP02144 154 aa6.48□□□□□ -1.37
CCL28-204ENST00000514421 PRH1P02810 166 aa6.48□□□□□ -1.37
CCL28-204ENST00000514421 RPLP1P05386 114 aaKnown RBP6.48□□□□□ -1.37
CCL28-204ENST00000514421 H2AFB1P0C5Y9 115 aa6.48□□□□□ -1.37
CCL28-204ENST00000514421 PF4V1P10720 104 aa6.48□□□□□ -1.37
CCL28-204ENST00000514421 MAS1LP35410 378 aa6.48□□□□□ -1.37
CCL28-204ENST00000514421 MYCNOSP40205 109 aa6.48□□□□□ -1.37
CCL28-204ENST00000514421 RAB11AP62491 216 aa6.48□□□□□ -1.37
CCL28-204ENST00000514421 SSBP2P81877 361 aaPredicted RBP6.48□□□□□ -1.37
CCL28-204ENST00000514421 ZNF616Q08AN1 781 aa6.48□□□□□ -1.37
CCL28-204ENST00000514421 KIAA0141Q14154 515 aaPredicted RBP6.48□□□□□ -1.37
CCL28-204ENST00000514421 PEA15Q15121 130 aa6.48□□□□□ -1.37
CCL28-204ENST00000514421 TNXAQ16473 311 aa6.48□□□□□ -1.37
CCL28-204ENST00000514421 C2orf83Q53S99 150 aa6.48□□□□□ -1.37
CCL28-204ENST00000514421 TMEM41BQ5BJD5 291 aa6.48□□□□□ -1.37
CCL28-204ENST00000514421 C19orf54Q5BKX5 351 aa6.48□□□□□ -1.37
CCL28-204ENST00000514421 OR8G2PQ6IF36 304 aa6.48□□□□□ -1.37
CCL28-204ENST00000514421 WFDC9Q8NEX5 89 aa6.48□□□□□ -1.37
CCL28-204ENST00000514421 OR5T1Q8NG75 326 aa6.48□□□□□ -1.37
CCL28-204ENST00000514421 OR10G4Q8NGN3 311 aa6.48□□□□□ -1.37
CCL28-204ENST00000514421 OR1L8Q8NGR8 309 aa6.48□□□□□ -1.37
CCL28-204ENST00000514421 UBE2E2Q96LR5 201 aa6.48□□□□□ -1.37
CCL28-204ENST00000514421 RSG1Q9BU20 258 aa6.48□□□□□ -1.37
CCL28-204ENST00000514421 PBDC1Q9BVG4 233 aa6.48□□□□□ -1.37
CCL28-204ENST00000514421 NPCDR1Q9BY65 106 aa6.48□□□□□ -1.37
CCL28-204ENST00000514421 KLK15Q9H2R5 256 aa6.48□□□□□ -1.37
CCL28-204ENST00000514421 ZNF430Q9H8G1 570 aaPredicted RBP6.48□□□□□ -1.37
CCL28-204ENST00000514421 HEYLQ9NQ87 328 aaPredicted RBP6.48□□□□□ -1.37
CCL28-204ENST00000514421 CMYA5Q8N3K9 4069 aa6.48□□□□□ -1.37
CCL28-204ENST00000514421 VWFP04275 2813 aa6.47□□□□□ -1.37
CCL28-204ENST00000514421 UBE2L5PA0A1B0GUS4 154 aa6.47□□□□□ -1.37
CCL28-204ENST00000514421 A0A1W2PN81 502 aa6.47□□□□□ -1.37
CCL28-204ENST00000514421 CGB1A6NKQ9 187 aa6.47□□□□□ -1.37
CCL28-204ENST00000514421 SEC14L6B5MCN3 397 aa6.47□□□□□ -1.37
CCL28-204ENST00000514421 NPY1RP25929 384 aa6.47□□□□□ -1.37
CCL28-204ENST00000514421 CHRNA7P36544 502 aa6.47□□□□□ -1.37
CCL28-204ENST00000514421 RPL8P62917 257 aaKnown RBP6.47□□□□□ -1.37
CCL28-204ENST00000514421 ZNF726P1Q15940 193 aa6.47□□□□□ -1.37
CCL28-204ENST00000514421 GUK1Q16774 197 aa6.47□□□□□ -1.37
CCL28-204ENST00000514421 ZNF506Q5JVG8 444 aa6.47□□□□□ -1.37
CCL28-204ENST00000514421 ETV3LQ6ZN32 361 aa6.47□□□□□ -1.37
CCL28-204ENST00000514421 LCNL1Q6ZST4 164 aa6.47□□□□□ -1.37
CCL28-204ENST00000514421 SVBPQ8N300 66 aa6.47□□□□□ -1.37
CCL28-204ENST00000514421 ZNF491Q8N8L2 437 aa6.47□□□□□ -1.37
CCL28-204ENST00000514421 SLC24A4Q8NFF2 622 aa6.47□□□□□ -1.37
CCL28-204ENST00000514421 MYOZ3Q8TDC0 251 aa6.47□□□□□ -1.37
CCL28-204ENST00000514421 SRSF12Q8WXF0 261 aaKnown RBP6.47□□□□□ -1.37
CCL28-204ENST00000514421 RCC1LQ96I51 464 aaKnown RBP6.47□□□□□ -1.37
CCL28-204ENST00000514421 RBFOX3A6NFN3 312 aa6.46□□□□□ -1.38
CCL28-204ENST00000514421 C17orf112F2Z3M2 114 aa6.46□□□□□ -1.38
CCL28-204ENST00000514421 H3BUA1 57 aa6.46□□□□□ -1.38
CCL28-204ENST00000514421 BRI3O95415 125 aa6.46□□□□□ -1.38
CCL28-204ENST00000514421 IFNA10P01566 189 aa6.46□□□□□ -1.38
CCL28-204ENST00000514421 APOC3P02656 99 aa6.46□□□□□ -1.38
CCL28-204ENST00000514421 PF4P02776 101 aa6.46□□□□□ -1.38
CCL28-204ENST00000514421 SFTA3P0C7M3 94 aa6.46□□□□□ -1.38
CCL28-204ENST00000514421 RNASE2P10153 161 aaKnown RBP6.46□□□□□ -1.38
CCL28-204ENST00000514421 FGF7P21781 194 aa6.46□□□□□ -1.38
CCL28-204ENST00000514421 OPRK1P41145 380 aa6.46□□□□□ -1.38
CCL28-204ENST00000514421 RPL27AP46776 148 aaKnown RBP6.46□□□□□ -1.38
CCL28-204ENST00000514421 HOXA1P49639 335 aaPredicted RBP6.46□□□□□ -1.38
CCL28-204ENST00000514421 RAB2AP61019 212 aa6.46□□□□□ -1.38
CCL28-204ENST00000514421 CCL20P78556 96 aa6.46□□□□□ -1.38
CCL28-204ENST00000514421 SPINK9Q5DT21 86 aa6.46□□□□□ -1.38
CCL28-204ENST00000514421 SLC25A24Q6NUK1 477 aa6.46□□□□□ -1.38
CCL28-204ENST00000514421 ACSM6Q6P461 480 aa6.46□□□□□ -1.38
CCL28-204ENST00000514421 C18orf65Q6ZTR6 163 aa6.46□□□□□ -1.38
CCL28-204ENST00000514421 C8orf86Q6ZUL3 223 aa6.46□□□□□ -1.38
CCL28-204ENST00000514421 RPP25LQ8N5L8 163 aaKnown RBP6.46□□□□□ -1.38
CCL28-204ENST00000514421 TTC9CQ8N5M4 171 aa6.46□□□□□ -1.38
CCL28-204ENST00000514421 ZNF114Q8NC26 417 aa6.46□□□□□ -1.38
CCL28-204ENST00000514421 KLHL30-AS1Q8NEE0 82 aa6.46□□□□□ -1.38
CCL28-204ENST00000514421 CACNG8Q8WXS5 425 aa6.46□□□□□ -1.38
CCL28-204ENST00000514421 MS4A10Q96PG2 267 aa6.46□□□□□ -1.38
CCL28-204ENST00000514421 SRSF8Q9BRL6 282 aaKnown RBP6.46□□□□□ -1.38
CCL28-204ENST00000514421 SLC35B3Q9H1N7 401 aa6.46□□□□□ -1.38
CCL28-204ENST00000514421 PLEKHA3Q9HB20 300 aa6.46□□□□□ -1.38
CCL28-204ENST00000514421 NPVFQ9HCQ7 196 aa6.46□□□□□ -1.38
CCL28-204ENST00000514421 TREM1Q9NP99 234 aa6.46□□□□□ -1.38
CCL28-204ENST00000514421 ZNF355PQ9NSJ1 428 aa6.46□□□□□ -1.38
CCL28-204ENST00000514421 NOTCH1P46531 2555 aa6.45□□□□□ -1.38
CCL28-204ENST00000514421 A0A0G2JLM5 398 aa6.45□□□□□ -1.38
CCL28-204ENST00000514421 CTXND1A0A1B0GTU2 59 aa6.45□□□□□ -1.38
CCL28-204ENST00000514421 F8W036 122 aa6.45□□□□□ -1.38
CCL28-204ENST00000514421 CCL24O00175 119 aa6.45□□□□□ -1.38
CCL28-204ENST00000514421 TRGV3P03979 118 aa6.45□□□□□ -1.38
CCL28-204ENST00000514421 HSPB1P04792 205 aaKnown RBP6.45□□□□□ -1.38
CCL28-204ENST00000514421 GPX4P36969 197 aaPredicted RBP6.45□□□□□ -1.38
CCL28-204ENST00000514421 TAGLN2P37802 199 aaKnown RBP6.45□□□□□ -1.38
CCL28-204ENST00000514421 SMCPP49901 116 aaPredicted RBP6.45□□□□□ -1.38
CCL28-204ENST00000514421 AKR1C1Q04828 323 aa6.45□□□□□ -1.38
CCL28-204ENST00000514421 KHDC3LQ587J8 217 aa6.45□□□□□ -1.38
CCL28-204ENST00000514421 ASPHD1Q5U4P2 390 aa6.45□□□□□ -1.38
CCL28-204ENST00000514421 ATRAIDQ6UW56 229 aa6.45□□□□□ -1.38
CCL28-204ENST00000514421 MRPL41Q8IXM3 137 aaKnown RBP6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms