RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 C10orf113Q5VZT2 155 aa11.82□□□□□ -0.52
VCAN-211ENST00000513984 OR51G1Q8NGK1 321 aa11.82□□□□□ -0.52
VCAN-211ENST00000513984 FAM167A-AS1Q96KT0 104 aa11.82□□□□□ -0.52
VCAN-211ENST00000513984 YPEL4Q96NS1 127 aa11.82□□□□□ -0.52
VCAN-211ENST00000513984 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.82□□□□□ -0.524e-13■■■■□ 26.6
VCAN-211ENST00000513984 CRYBG3Q68DQ2 2970 aa11.82□□□□□ -0.52
VCAN-211ENST00000513984 ELOA3CA0A087WX78 387 aaPredicted RBP11.81□□□□□ -0.52
VCAN-211ENST00000513984 OR7C2O60412 319 aa11.81□□□□□ -0.52
VCAN-211ENST00000513984 MT-ND4LP03901 98 aa11.81□□□□□ -0.52
VCAN-211ENST00000513984 MSMBP08118 114 aa11.81□□□□□ -0.52
VCAN-211ENST00000513984 IGLC1P0CG04 106 aa11.81□□□□□ -0.52
VCAN-211ENST00000513984 PLP1P60201 277 aa11.81□□□□□ -0.52
VCAN-211ENST00000513984 KIAA0141Q14154 515 aaPredicted RBP11.81□□□□□ -0.52
VCAN-211ENST00000513984 MORN5Q5VZ52 161 aa11.81□□□□□ -0.52
VCAN-211ENST00000513984 TTC9CQ8N5M4 171 aa11.81□□□□□ -0.52
VCAN-211ENST00000513984 SLC25A2Q9BXI2 301 aa11.81□□□□□ -0.52
VCAN-211ENST00000513984 TMEM242Q9NWH2 141 aa11.81□□□□□ -0.52
VCAN-211ENST00000513984 IGHV7-81A0A0B4J1V7 117 aa11.81□□□□□ -0.52
VCAN-211ENST00000513984 CXorf65A6NEN9 183 aa11.81□□□□□ -0.52
VCAN-211ENST00000513984 FOLR2P14207 255 aa11.81□□□□□ -0.52
VCAN-211ENST00000513984 SLC25A16P16260 332 aa11.81□□□□□ -0.52
VCAN-211ENST00000513984 RPL23P62829 140 aaKnown RBP11.81□□□□□ -0.52
VCAN-211ENST00000513984 DOK5Q9P104 306 aa11.81□□□□□ -0.52
VCAN-211ENST00000513984 ANKRD17O75179 2603 aaKnown RBP11.8□□□□□ -0.52
VCAN-211ENST00000513984 IGLV11-55A0A075B6I3 123 aa11.8□□□□□ -0.52
VCAN-211ENST00000513984 TRAV40A0A0B4J280 105 aa11.8□□□□□ -0.52
VCAN-211ENST00000513984 C11orf52Q96A22 123 aa11.8□□□□□ -0.52
VCAN-211ENST00000513984 ZNF355PQ9NSJ1 428 aa11.8□□□□□ -0.52
VCAN-211ENST00000513984 NDUFB4O95168 129 aa11.79□□□□□ -0.52
VCAN-211ENST00000513984 EGR2P11161 476 aaPredicted RBP11.79□□□□□ -0.52
VCAN-211ENST00000513984 ADIRFQ15847 76 aa11.79□□□□□ -0.52
VCAN-211ENST00000513984 CLEC12BQ2HXU8 276 aa11.79□□□□□ -0.52
VCAN-211ENST00000513984 RNF212Q495C1 297 aa11.79□□□□□ -0.52
VCAN-211ENST00000513984 FAM24BQ8N5W8 94 aa11.79□□□□□ -0.52
VCAN-211ENST00000513984 OR5AU1Q8NGC0 362 aa11.79□□□□□ -0.52
VCAN-211ENST00000513984 FANCD2OSQ96PS1 177 aa11.79□□□□□ -0.52
VCAN-211ENST00000513984 RASL11BQ9BPW5 248 aa11.79□□□□□ -0.52
VCAN-211ENST00000513984 PRELID1Q9Y255 219 aa11.79□□□□□ -0.52
VCAN-211ENST00000513984 TRAV5A0A0B4J249 113 aa11.79□□□□□ -0.52
VCAN-211ENST00000513984 SCO2A0A1W2PP80 73 aa11.79□□□□□ -0.52
VCAN-211ENST00000513984 B4DSR2 109 aa11.79□□□□□ -0.52
VCAN-211ENST00000513984 CRYBA1P05813 215 aa11.79□□□□□ -0.52
VCAN-211ENST00000513984 LINC00305Q7Z4B0 112 aa11.79□□□□□ -0.52
VCAN-211ENST00000513984 RBM14Q96PK6 669 aaKnown RBP11.79□□□□□ -0.52
VCAN-211ENST00000513984 UHRF2Q96PU4 802 aa11.79□□□□□ -0.52
VCAN-211ENST00000513984 DERL1Q9BUN8 251 aa11.79□□□□□ -0.52
VCAN-211ENST00000513984 CTDSP1Q9GZU7 261 aa11.79□□□□□ -0.52
VCAN-211ENST00000513984 GSX1Q9H4S2 264 aaPredicted RBP11.79□□□□□ -0.52
VCAN-211ENST00000513984 VPS13CQ709C8 3753 aa11.78□□□□□ -0.52
VCAN-211ENST00000513984 A0A1W2PRE2 83 aa11.78□□□□□ -0.52
VCAN-211ENST00000513984 MEGF9Q9H1U4 602 aa11.78□□□□□ -0.52
VCAN-211ENST00000513984 IGHV3OR16-10A0A075B7F0 116 aa11.77□□□□□ -0.52
VCAN-211ENST00000513984 A0A096LNT2 108 aa11.77□□□□□ -0.52
VCAN-211ENST00000513984 HYPMO75409 117 aa11.77□□□□□ -0.52
VCAN-211ENST00000513984 IGKV1-17P01599 117 aa11.77□□□□□ -0.52
VCAN-211ENST00000513984 OR10J4P0C629 311 aa11.77□□□□□ -0.52
VCAN-211ENST00000513984 ORM2P19652 201 aa11.77□□□□□ -0.52
VCAN-211ENST00000513984 UBE2L3P68036 154 aaKnown RBP11.77□□□□□ -0.52
VCAN-211ENST00000513984 KLF17Q5JT82 389 aaPredicted RBP11.77□□□□□ -0.52
VCAN-211ENST00000513984 OR1B1Q8NGR6 318 aa11.77□□□□□ -0.52
VCAN-211ENST00000513984 SGMS2Q8NHU3 365 aa11.77□□□□□ -0.52
VCAN-211ENST00000513984 ZNF48Q96MX3 618 aaPredicted RBP11.77□□□□□ -0.52
VCAN-211ENST00000513984 HSPB9Q9BQS6 159 aa11.77□□□□□ -0.52
VCAN-211ENST00000513984 TRAV20A0A0B4J274 112 aa11.76□□□□□ -0.53
VCAN-211ENST00000513984 CLDN34H7C241 214 aa11.76□□□□□ -0.53
VCAN-211ENST00000513984 IGHV4-38-2P0DP08 117 aa11.76□□□□□ -0.53
VCAN-211ENST00000513984 PSG1P11464 419 aa11.76□□□□□ -0.53
VCAN-211ENST00000513984 RAB5AP20339 215 aa11.76□□□□□ -0.53
VCAN-211ENST00000513984 GATA3P23771 443 aa11.76□□□□□ -0.53
VCAN-211ENST00000513984 FLI1Q01543 452 aaPredicted RBP11.76□□□□□ -0.53
VCAN-211ENST00000513984 ELOBQ15370 118 aa11.76□□□□□ -0.53
VCAN-211ENST00000513984 TIGITQ495A1 244 aa11.76□□□□□ -0.53
VCAN-211ENST00000513984 BRD3OSQ6XYD6 125 aa11.76□□□□□ -0.53
VCAN-211ENST00000513984 PAXXQ9BUH6 204 aa11.76□□□□□ -0.53
VCAN-211ENST00000513984 OR51M1Q9H341 326 aa11.76□□□□□ -0.53
VCAN-211ENST00000513984 C7orf69Q9H7B7 122 aa11.76□□□□□ -0.53
VCAN-211ENST00000513984 MLXQ9UH92 298 aa11.76□□□□□ -0.53
VCAN-211ENST00000513984 FBN2P35556 2912 aa11.76□□□□□ -0.53
VCAN-211ENST00000513984 GGTLC3B5MD39 225 aa11.76□□□□□ -0.53
VCAN-211ENST00000513984 FABP1P07148 127 aa11.76□□□□□ -0.53
VCAN-211ENST00000513984 KLK9Q2XQG4 91 aa11.76□□□□□ -0.53
VCAN-211ENST00000513984 LINC01551Q86U37 167 aa11.76□□□□□ -0.53
VCAN-211ENST00000513984 C5orf56Q8N8D9 126 aa11.76□□□□□ -0.53
VCAN-211ENST00000513984 STXBP6Q8NFX7 210 aa11.76□□□□□ -0.53
VCAN-211ENST00000513984 Q8WTZ3 238 aa11.76□□□□□ -0.53
VCAN-211ENST00000513984 HIF1ANQ9NWT6 349 aa11.76□□□□□ -0.53
VCAN-211ENST00000513984 THYN1Q9P016 225 aa11.76□□□□□ -0.53
VCAN-211ENST00000513984 KLK9Q9UKQ9 250 aa11.76□□□□□ -0.53
VCAN-211ENST00000513984 CR1P17927 2039 aa11.75□□□□□ -0.53
VCAN-211ENST00000513984 TRBV20OR9-2A0A075B6H5 130 aa11.75□□□□□ -0.53
VCAN-211ENST00000513984 A0A0U1RQK1 487 aa11.75□□□□□ -0.53
VCAN-211ENST00000513984 PYYP10082 97 aa11.75□□□□□ -0.53
VCAN-211ENST00000513984 ZNF343Q6P1L6 599 aa11.75□□□□□ -0.53
VCAN-211ENST00000513984 FAM110DQ8TAY7 271 aaPredicted RBP11.75□□□□□ -0.53
VCAN-211ENST00000513984 PIFOQ8TCI5 191 aa11.75□□□□□ -0.53
VCAN-211ENST00000513984 FXYD5Q96DB9 178 aa11.75□□□□□ -0.53
VCAN-211ENST00000513984 TRAV30A0A087WSZ9 112 aa11.74□□□□□ -0.53
VCAN-211ENST00000513984 TOMM40O96008 361 aa11.74□□□□□ -0.53
VCAN-211ENST00000513984 MFAP4P55083 255 aa11.74□□□□□ -0.53
VCAN-211ENST00000513984 SSX3Q99909 188 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms