RNA–Protein interactions for RNA: ENST00000512881.5

RFC1-215, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-215ENST00000512881 TNFRSF9Q07011 255 aa5.06□□□□□ -1.6
RFC1-215ENST00000512881 DEFB135Q30KP9 77 aa5.06□□□□□ -1.6
RFC1-215ENST00000512881 SP6Q3SY56 376 aa5.06□□□□□ -1.6
RFC1-215ENST00000512881 GPR107Q5VW38 600 aa5.06□□□□□ -1.6
RFC1-215ENST00000512881 TOMM20LQ6UXN7 152 aa5.06□□□□□ -1.6
RFC1-215ENST00000512881 LYG2Q86SG7 212 aa5.06□□□□□ -1.6
RFC1-215ENST00000512881 APRG1Q8IVJ8 170 aa5.06□□□□□ -1.6
RFC1-215ENST00000512881 KIR2DL5AQ8N109 375 aa5.06□□□□□ -1.6
RFC1-215ENST00000512881 ARRDC1Q8N5I2 433 aa5.06□□□□□ -1.6
RFC1-215ENST00000512881 DUSP18Q8NEJ0 188 aa5.06□□□□□ -1.6
RFC1-215ENST00000512881 KIR2DL5BQ8NHK3 375 aa5.06□□□□□ -1.6
RFC1-215ENST00000512881 TERB2Q8NHR7 220 aa5.06□□□□□ -1.6
RFC1-215ENST00000512881 ZFAND1Q8TCF1 268 aa5.06□□□□□ -1.6
RFC1-215ENST00000512881 C15orf40Q8WUR7 153 aa5.06□□□□□ -1.6
RFC1-215ENST00000512881 RNF183Q96D59 192 aa5.06□□□□□ -1.6
RFC1-215ENST00000512881 GALNT14Q96FL9 552 aa5.06□□□□□ -1.6
RFC1-215ENST00000512881 TP53RKQ96S44 253 aa5.06□□□□□ -1.6
RFC1-215ENST00000512881 MAP6D1Q9H9H5 199 aa5.06□□□□□ -1.6
RFC1-215ENST00000512881 COPZ2Q9P299 210 aa5.06□□□□□ -1.6
RFC1-215ENST00000512881 EXTL2Q9UBQ6 330 aa5.06□□□□□ -1.6
RFC1-215ENST00000512881 IGKV3-7A0A075B6H7 116 aa5.05□□□□□ -1.6
RFC1-215ENST00000512881 CXorf65A6NEN9 183 aa5.05□□□□□ -1.6
RFC1-215ENST00000512881 INS-IGF2F8WCM5 200 aa5.05□□□□□ -1.6
RFC1-215ENST00000512881 ST8SIA3O43173 380 aa5.05□□□□□ -1.6
RFC1-215ENST00000512881 GABARAPO95166 117 aa5.05□□□□□ -1.6
RFC1-215ENST00000512881 TMEM50AO95807 157 aa5.05□□□□□ -1.6
RFC1-215ENST00000512881 APOHP02749 345 aaPredicted RBP5.05□□□□□ -1.6
RFC1-215ENST00000512881 CD74P04233 296 aa5.05□□□□□ -1.6
RFC1-215ENST00000512881 SMIM18P0DKX4 95 aa5.05□□□□□ -1.6
RFC1-215ENST00000512881 AKR1C2P52895 323 aa5.05□□□□□ -1.6
RFC1-215ENST00000512881 PPP5CP53041 499 aa5.05□□□□□ -1.6
RFC1-215ENST00000512881 SUB1P53999 127 aaKnown RBP eCLIP5.05□□□□□ -1.6
RFC1-215ENST00000512881 PAFAH1B2P68402 229 aa5.05□□□□□ -1.6
RFC1-215ENST00000512881 PMS2P11Q13670 270 aa5.05□□□□□ -1.6
RFC1-215ENST00000512881 TRIM16LQ309B1 348 aa5.05□□□□□ -1.6
RFC1-215ENST00000512881 SCGB2B2Q4G0G5 96 aa5.05□□□□□ -1.6
RFC1-215ENST00000512881 FAM90A2PQ658T7 463 aa5.05□□□□□ -1.6
RFC1-215ENST00000512881 PVRIGQ6DKI7 326 aa5.05□□□□□ -1.6
RFC1-215ENST00000512881 GBGT1Q8N5D6 347 aa5.05□□□□□ -1.6
RFC1-215ENST00000512881 SLC35G3Q8N808 338 aa5.05□□□□□ -1.6
RFC1-215ENST00000512881 TMEM229BQ8NBD8 167 aa5.05□□□□□ -1.6
RFC1-215ENST00000512881 OR4D10Q8NGI6 311 aa5.05□□□□□ -1.6
RFC1-215ENST00000512881 OR13C8Q8NGS7 320 aa5.05□□□□□ -1.6
RFC1-215ENST00000512881 C6orf62Q9GZU0 229 aaPredicted RBP5.05□□□□□ -1.6
RFC1-215ENST00000512881 CSTL1Q9H114 145 aa5.05□□□□□ -1.6
RFC1-215ENST00000512881 DNAH6Q9C0G6 4158 aa5.05□□□□□ -1.6
RFC1-215ENST00000512881 IGHV3-66A0A0C4DH42 116 aa5.04□□□□□ -1.6
RFC1-215ENST00000512881 MPTX1A8MV57 137 aa5.04□□□□□ -1.6
RFC1-215ENST00000512881 GABARAPH6UMI1 98 aa5.04□□□□□ -1.6
RFC1-215ENST00000512881 CTDSP2O14595 271 aa5.04□□□□□ -1.6
RFC1-215ENST00000512881 B3GALNT1O75752 331 aa5.04□□□□□ -1.6
RFC1-215ENST00000512881 DFFBO76075 338 aa5.04□□□□□ -1.6
RFC1-215ENST00000512881 RAB3DO95716 219 aa5.04□□□□□ -1.6
RFC1-215ENST00000512881 CD5P06127 495 aa5.04□□□□□ -1.6
RFC1-215ENST00000512881 RNASE2P10153 161 aaKnown RBP5.04□□□□□ -1.6
RFC1-215ENST00000512881 UCP1P25874 307 aa5.04□□□□□ -1.6
RFC1-215ENST00000512881 TAS2R19P59542 299 aa5.04□□□□□ -1.6
RFC1-215ENST00000512881 STEAP1BQ6NZ63 245 aa5.04□□□□□ -1.6
RFC1-215ENST00000512881 CEMP1Q6PRD7 247 aaPredicted RBP5.04□□□□□ -1.6
RFC1-215ENST00000512881 ZNF600Q6ZNG1 722 aa5.04□□□□□ -1.6
RFC1-215ENST00000512881 TCF24Q7RTU0 167 aa5.04□□□□□ -1.6
RFC1-215ENST00000512881 CCDC71LQ8N9Z2 235 aa5.04□□□□□ -1.6
RFC1-215ENST00000512881 MARCH1Q8TCQ1 289 aa5.04□□□□□ -1.6
RFC1-215ENST00000512881 RRNAD1Q96FB5 475 aaKnown RBP5.04□□□□□ -1.6
RFC1-215ENST00000512881 GINS3Q9BRX5 216 aa5.04□□□□□ -1.6
RFC1-215ENST00000512881 RTBDNQ9BSG5 229 aaPredicted RBP5.04□□□□□ -1.6
RFC1-215ENST00000512881 PDCD10Q9BUL8 212 aa5.04□□□□□ -1.6
RFC1-215ENST00000512881 MS4A6AQ9H2W1 248 aa5.04□□□□□ -1.6
RFC1-215ENST00000512881 MIXL1Q9H2W2 232 aa5.04□□□□□ -1.6
RFC1-215ENST00000512881 VSIRQ9H7M9 311 aa5.04□□□□□ -1.6
RFC1-215ENST00000512881 ENY2Q9NPA8 101 aa5.04□□□□□ -1.6
RFC1-215ENST00000512881 PUS1Q9Y606 427 aaKnown RBP eCLIP5.04□□□□□ -1.6
RFC1-215ENST00000512881 FRAS1Q86XX4 4008 aa5.04□□□□□ -1.6
RFC1-215ENST00000512881 A0A0G2JRQ6 117 aa5.03□□□□□ -1.6
RFC1-215ENST00000512881 TEX13DA0A0J9YY54 714 aaPredicted RBP5.03□□□□□ -1.6
RFC1-215ENST00000512881 A0A1B0GU03 582 aa5.03□□□□□ -1.6
RFC1-215ENST00000512881 DISC1C4P0D8 188 aa5.03□□□□□ -1.6
RFC1-215ENST00000512881 DNASE2O00115 360 aaPredicted RBP5.03□□□□□ -1.6
RFC1-215ENST00000512881 CORTO00230 105 aa5.03□□□□□ -1.6
RFC1-215ENST00000512881 RGS5O15539 181 aa5.03□□□□□ -1.6
RFC1-215ENST00000512881 CLN5O75503 358 aa5.03□□□□□ -1.6
RFC1-215ENST00000512881 CDS2O95674 445 aa5.03□□□□□ -1.6
RFC1-215ENST00000512881 NPPCP23582 126 aa5.03□□□□□ -1.6
RFC1-215ENST00000512881 RPL5P46777 297 aaKnown RBP5.03□□□□□ -1.6
RFC1-215ENST00000512881 ALDH3B2P48448 385 aa5.03□□□□□ -1.6
RFC1-215ENST00000512881 HOXA1P49639 335 aaPredicted RBP5.03□□□□□ -1.6
RFC1-215ENST00000512881 SPCS3P61009 180 aa5.03□□□□□ -1.6
RFC1-215ENST00000512881 MRPS10P82664 201 aaKnown RBP5.03□□□□□ -1.6
RFC1-215ENST00000512881 SSBP1Q04837 148 aaKnown RBP5.03□□□□□ -1.6
RFC1-215ENST00000512881 MEF2DQ14814 521 aa5.03□□□□□ -1.6
RFC1-215ENST00000512881 SPCS2Q15005 226 aa5.03□□□□□ -1.6
RFC1-215ENST00000512881 GPR141Q7Z602 305 aa5.03□□□□□ -1.6
RFC1-215ENST00000512881 SELENOHQ8IZQ5 122 aaKnown RBP5.03□□□□□ -1.6
RFC1-215ENST00000512881 TMEM217Q8N7C4 229 aa5.03□□□□□ -1.6
RFC1-215ENST00000512881 OR4X1Q8NH49 305 aa5.03□□□□□ -1.6
RFC1-215ENST00000512881 RNASE11Q8TAA1 199 aaKnown RBP5.03□□□□□ -1.6
RFC1-215ENST00000512881 TMEM230Q96A57 120 aa5.03□□□□□ -1.6
RFC1-215ENST00000512881 RARRES2Q99969 163 aa5.03□□□□□ -1.6
RFC1-215ENST00000512881 TMEM222Q9H0R3 208 aa5.03□□□□□ -1.6
RFC1-215ENST00000512881 FNDC4Q9H6D8 234 aaPredicted RBP5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms