RNA–Protein interactions for RNA: ENST00000512068.1

HTT-209, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-209ENST00000512068 LSM4Q9Y4Z0 139 aaKnown RBP6.38□□□□□ -1.39
HTT-209ENST00000512068 ABCA1O95477 2261 aa6.38□□□□□ -1.39
HTT-209ENST00000512068 UTP20O75691 2785 aaKnown RBP6.38□□□□□ -1.39
HTT-209ENST00000512068 POLQO75417 2590 aa6.37□□□□□ -1.39
HTT-209ENST00000512068 CREBBPQ92793 2442 aa6.37□□□□□ -1.39
HTT-209ENST00000512068 TRAV1-1A0A0B4J248 108 aa6.37□□□□□ -1.39
HTT-209ENST00000512068 TRAV41A0A0B4J266 112 aa6.37□□□□□ -1.39
HTT-209ENST00000512068 MDFIC2A0A1B0GVS7 189 aa6.37□□□□□ -1.39
HTT-209ENST00000512068 CD5LO43866 347 aa6.37□□□□□ -1.39
HTT-209ENST00000512068 IGHV3-48P01763 117 aa6.37□□□□□ -1.39
HTT-209ENST00000512068 LINC00869P0C866 280 aa6.37□□□□□ -1.39
HTT-209ENST00000512068 MED14OSP0DP75 135 aa6.37□□□□□ -1.39
HTT-209ENST00000512068 S100A7P31151 101 aa6.37□□□□□ -1.39
HTT-209ENST00000512068 TAGLN2P37802 199 aaKnown RBP6.37□□□□□ -1.39
HTT-209ENST00000512068 FGF8P55075 233 aaPredicted RBP6.37□□□□□ -1.39
HTT-209ENST00000512068 MFAP4P55083 255 aa6.37□□□□□ -1.39
HTT-209ENST00000512068 SSBP2P81877 361 aaPredicted RBP6.37□□□□□ -1.39
HTT-209ENST00000512068 FBLN7Q53RD9 439 aa6.37□□□□□ -1.39
HTT-209ENST00000512068 C9orf139Q6ZV77 190 aa6.37□□□□□ -1.39
HTT-209ENST00000512068 THAP8Q8NA92 274 aa6.37□□□□□ -1.39
HTT-209ENST00000512068 TMEM116Q8NCL8 245 aa6.37□□□□□ -1.39
HTT-209ENST00000512068 OR4X1Q8NH49 305 aa6.37□□□□□ -1.39
HTT-209ENST00000512068 LYPD6BQ8NI32 183 aa6.37□□□□□ -1.39
HTT-209ENST00000512068 MBD3L1Q8WWY6 194 aa6.37□□□□□ -1.39
HTT-209ENST00000512068 FAM210AQ96ND0 272 aa6.37□□□□□ -1.39
HTT-209ENST00000512068 TRGV9Q99603 122 aa6.37□□□□□ -1.39
HTT-209ENST00000512068 MRPL32Q9BYC8 188 aaKnown RBP6.37□□□□□ -1.39
HTT-209ENST00000512068 FNDC4Q9H6D8 234 aaPredicted RBP6.37□□□□□ -1.39
HTT-209ENST00000512068 YAE1D1Q9NRH1 226 aa6.37□□□□□ -1.39
HTT-209ENST00000512068 GAR1Q9NY12 217 aaKnown RBP6.37□□□□□ -1.39
HTT-209ENST00000512068 C21orf62Q9NYP8 219 aa6.37□□□□□ -1.39
HTT-209ENST00000512068 GNG13Q9P2W3 67 aa6.37□□□□□ -1.39
HTT-209ENST00000512068 SLC45A2Q9UMX9 530 aa6.37□□□□□ -1.39
HTT-209ENST00000512068 HELZ2Q9BYK8 2649 aaKnown RBP6.36□□□□□ -1.39
HTT-209ENST00000512068 IGLV11-55A0A075B6I3 123 aa6.36□□□□□ -1.39
HTT-209ENST00000512068 RBFOX3A6NFN3 312 aa6.36□□□□□ -1.39
HTT-209ENST00000512068 SH2D7A6NKC9 451 aaPredicted RBP6.36□□□□□ -1.39
HTT-209ENST00000512068 SEC14L6B5MCN3 397 aa6.36□□□□□ -1.39
HTT-209ENST00000512068 F8W036 122 aa6.36□□□□□ -1.39
HTT-209ENST00000512068 I3L2K1 104 aa6.36□□□□□ -1.39
HTT-209ENST00000512068 AP4M1O00189 453 aa6.36□□□□□ -1.39
HTT-209ENST00000512068 HMGB3O15347 200 aaKnown RBP6.36□□□□□ -1.39
HTT-209ENST00000512068 CLN5O75503 358 aa6.36□□□□□ -1.39
HTT-209ENST00000512068 OR2J3O76001 311 aa6.36□□□□□ -1.39
HTT-209ENST00000512068 CXorf1O96002 111 aa6.36□□□□□ -1.39
HTT-209ENST00000512068 IGHV4-59P01825 116 aa6.36□□□□□ -1.39
HTT-209ENST00000512068 OR5G3P0C626 314 aa6.36□□□□□ -1.39
HTT-209ENST00000512068 IER3P46695 156 aa6.36□□□□□ -1.39
HTT-209ENST00000512068 PSMB3P49720 205 aa6.36□□□□□ -1.39
HTT-209ENST00000512068 MFAP2P55001 183 aa6.36□□□□□ -1.39
HTT-209ENST00000512068 HAGHQ16775 308 aa6.36□□□□□ -1.39
HTT-209ENST00000512068 AKIRIN2Q53H80 203 aa6.36□□□□□ -1.39
HTT-209ENST00000512068 KHDC3LQ587J8 217 aa6.36□□□□□ -1.39
HTT-209ENST00000512068 FAM78BQ5VT40 261 aa6.36□□□□□ -1.39
HTT-209ENST00000512068 C10orf113Q5VZT2 155 aa6.36□□□□□ -1.39
HTT-209ENST00000512068 PVRIGQ6DKI7 326 aa6.36□□□□□ -1.39
HTT-209ENST00000512068 C19orf35Q6ZS72 473 aa6.36□□□□□ -1.39
HTT-209ENST00000512068 BCL6BQ8N143 479 aaPredicted RBP6.36□□□□□ -1.39
HTT-209ENST00000512068 RPP25LQ8N5L8 163 aaKnown RBP6.36□□□□□ -1.39
HTT-209ENST00000512068 PIFOQ8TCI5 191 aa6.36□□□□□ -1.39
HTT-209ENST00000512068 GATAD1Q8WUU5 269 aa6.36□□□□□ -1.39
HTT-209ENST00000512068 RAB24Q969Q5 203 aa6.36□□□□□ -1.39
HTT-209ENST00000512068 EEF1AKMT3Q96AZ1 226 aa6.36□□□□□ -1.39
HTT-209ENST00000512068 NPFFR1Q9GZQ6 430 aa6.36□□□□□ -1.39
HTT-209ENST00000512068 SMDT1Q9H4I9 107 aa6.36□□□□□ -1.39
HTT-209ENST00000512068 TMEM231Q9H6L2 316 aa6.36□□□□□ -1.39
HTT-209ENST00000512068 MANBALQ9NQG1 85 aa6.36□□□□□ -1.39
HTT-209ENST00000512068 TECRQ9NZ01 308 aaKnown RBP6.36□□□□□ -1.39
HTT-209ENST00000512068 VPREB3Q9UKI3 123 aa6.36□□□□□ -1.39
HTT-209ENST00000512068 SOX21Q9Y651 276 aaPredicted RBP6.36□□□□□ -1.39
HTT-209ENST00000512068 CRYBG3Q68DQ2 2970 aa6.36□□□□□ -1.39
HTT-209ENST00000512068 CSPG4Q6UVK1 2322 aa6.35□□□□□ -1.39
HTT-209ENST00000512068 NUPL2O15504 423 aaKnown RBP6.35□□□□□ -1.39
HTT-209ENST00000512068 FSHBP01225 129 aa6.35□□□□□ -1.39
HTT-209ENST00000512068 LYZP61626 148 aa6.35□□□□□ -1.39
HTT-209ENST00000512068 RHOGP84095 191 aa6.35□□□□□ -1.39
HTT-209ENST00000512068 ASPHD1Q5U4P2 390 aa6.35□□□□□ -1.39
HTT-209ENST00000512068 Q6YL49 198 aa6.35□□□□□ -1.39
HTT-209ENST00000512068 CIARTQ8N365 385 aaPredicted RBP6.35□□□□□ -1.39
HTT-209ENST00000512068 OR1B1Q8NGR6 318 aa6.35□□□□□ -1.39
HTT-209ENST00000512068 VN1R17PQ8TDU5 208 aa6.35□□□□□ -1.39
HTT-209ENST00000512068 TXN2Q99757 166 aa6.35□□□□□ -1.39
HTT-209ENST00000512068 PRSS22Q9GZN4 317 aa6.35□□□□□ -1.39
HTT-209ENST00000512068 DNAJC4Q9NNZ3 241 aa6.35□□□□□ -1.39
HTT-209ENST00000512068 DOK5Q9P104 306 aa6.35□□□□□ -1.39
HTT-209ENST00000512068 FUT9Q9Y231 359 aa6.35□□□□□ -1.39
HTT-209ENST00000512068 IGKV1OR2-108A0A075B7D4 117 aa6.34□□□□□ -1.39
HTT-209ENST00000512068 TMEM218A2RU14 115 aa6.34□□□□□ -1.39
HTT-209ENST00000512068 FAM223BA6NKX1 122 aa6.34□□□□□ -1.39
HTT-209ENST00000512068 G3V318 75 aa6.34□□□□□ -1.39
HTT-209ENST00000512068 H3BUA1 57 aa6.34□□□□□ -1.39
HTT-209ENST00000512068 K7EIM0 57 aa6.34□□□□□ -1.39
HTT-209ENST00000512068 HOXA3O43365 443 aaPredicted RBP6.34□□□□□ -1.39
HTT-209ENST00000512068 OR7C2O60412 319 aa6.34□□□□□ -1.39
HTT-209ENST00000512068 HYPMO75409 117 aa6.34□□□□□ -1.39
HTT-209ENST00000512068 YIF1AO95070 293 aa6.34□□□□□ -1.39
HTT-209ENST00000512068 IGHG2P01859 326 aa6.34□□□□□ -1.39
HTT-209ENST00000512068 TRGV3P03979 118 aa6.34□□□□□ -1.39
HTT-209ENST00000512068 SFTA3P0C7M3 94 aa6.34□□□□□ -1.39
HTT-209ENST00000512068 RD3LP0DJH9 198 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms