RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 NPFFO15130 113 aa4.02□□□□□ -1.77
TRAPPC11-208ENST00000511955 EIF4EP06730 217 aaKnown RBP4.02□□□□□ -1.77
TRAPPC11-208ENST00000511955 TRGC1P0CF51 173 aa4.02□□□□□ -1.77
TRAPPC11-208ENST00000511955 GP1BBP13224 206 aa4.02□□□□□ -1.77
TRAPPC11-208ENST00000511955 ZNF19P17023 458 aa4.02□□□□□ -1.77
TRAPPC11-208ENST00000511955 GNLYP22749 145 aa4.02□□□□□ -1.77
TRAPPC11-208ENST00000511955 OR10J1P30954 320 aa4.02□□□□□ -1.77
TRAPPC11-208ENST00000511955 CACNG7P62955 275 aa4.02□□□□□ -1.77
TRAPPC11-208ENST00000511955 IL15RAQ13261 267 aa4.02□□□□□ -1.77
TRAPPC11-208ENST00000511955 MMDQ15546 238 aa4.02□□□□□ -1.77
TRAPPC11-208ENST00000511955 TMEM30BQ3MIR4 351 aa4.02□□□□□ -1.77
TRAPPC11-208ENST00000511955 SP5Q6BEB4 398 aaPredicted RBP4.02□□□□□ -1.77
TRAPPC11-208ENST00000511955 TREML4Q6UXN2 200 aa4.02□□□□□ -1.77
TRAPPC11-208ENST00000511955 Q6ZN92 141 aa4.02□□□□□ -1.77
TRAPPC11-208ENST00000511955 KRTAP1-3Q8IUG1 177 aa4.02□□□□□ -1.77
TRAPPC11-208ENST00000511955 SGPP2Q8IWX5 399 aa4.02□□□□□ -1.77
TRAPPC11-208ENST00000511955 C20orf196Q8IYI0 205 aa4.02□□□□□ -1.77
TRAPPC11-208ENST00000511955 MAPKAPK5-AS1Q8N8E1 139 aa4.02□□□□□ -1.77
TRAPPC11-208ENST00000511955 NEURL3Q96EH8 262 aa4.02□□□□□ -1.77
TRAPPC11-208ENST00000511955 ZC2HC1AQ96GY0 325 aa4.02□□□□□ -1.77
TRAPPC11-208ENST00000511955 TMEM70Q9BUB7 260 aa4.02□□□□□ -1.77
TRAPPC11-208ENST00000511955 KCNIP1Q9NZI2 227 aa4.02□□□□□ -1.77
TRAPPC11-208ENST00000511955 ENPP4Q9Y6X5 453 aa4.02□□□□□ -1.77
TRAPPC11-208ENST00000511955 ZNF407Q9C0G0 2248 aa4.02□□□□□ -1.77
TRAPPC11-208ENST00000511955 TRAV8-2A0A0B4J237 113 aa4.01□□□□□ -1.77
TRAPPC11-208ENST00000511955 TEX50A0A1B0GTY4 177 aa4.01□□□□□ -1.77
TRAPPC11-208ENST00000511955 C11orf98E9PRG8 122 aa4.01□□□□□ -1.77
TRAPPC11-208ENST00000511955 CCDC179H3BU77 68 aa4.01□□□□□ -1.77
TRAPPC11-208ENST00000511955 TNFSF13O75888 250 aa4.01□□□□□ -1.77
TRAPPC11-208ENST00000511955 NTN1O95631 604 aa4.01□□□□□ -1.77
TRAPPC11-208ENST00000511955 EPPINO95925 133 aa4.01□□□□□ -1.77
TRAPPC11-208ENST00000511955 MRPL3P09001 348 aaKnown RBP4.01□□□□□ -1.77
TRAPPC11-208ENST00000511955 TPT1P13693 172 aaKnown RBP4.01□□□□□ -1.77
TRAPPC11-208ENST00000511955 CTLA4P16410 223 aa4.01□□□□□ -1.77
TRAPPC11-208ENST00000511955 ELK1P19419 428 aa4.01□□□□□ -1.77
TRAPPC11-208ENST00000511955 THBS3P49746 956 aa4.01□□□□□ -1.77
TRAPPC11-208ENST00000511955 RPS23P62266 143 aaKnown RBP4.01□□□□□ -1.77
TRAPPC11-208ENST00000511955 TMEM267Q0VDI3 215 aaPredicted RBP4.01□□□□□ -1.77
TRAPPC11-208ENST00000511955 FUT5Q11128 374 aa4.01□□□□□ -1.77
TRAPPC11-208ENST00000511955 DHRS2Q13268 280 aa4.01□□□□□ -1.77
TRAPPC11-208ENST00000511955 GFRALQ6UXV0 394 aa4.01□□□□□ -1.77
TRAPPC11-208ENST00000511955 ZDHHC22Q8N966 263 aa4.01□□□□□ -1.77
TRAPPC11-208ENST00000511955 MUCL1Q96DR8 90 aa4.01□□□□□ -1.77
TRAPPC11-208ENST00000511955 SLC25A44Q96H78 314 aaPredicted RBP4.01□□□□□ -1.77
TRAPPC11-208ENST00000511955 SDF2Q99470 211 aa4.01□□□□□ -1.77
TRAPPC11-208ENST00000511955 SAMD10Q9BYL1 202 aa4.01□□□□□ -1.77
TRAPPC11-208ENST00000511955 POLR2J2Q9GZM3 115 aaKnown RBP4.01□□□□□ -1.77
TRAPPC11-208ENST00000511955 ATG5Q9H1Y0 275 aa4.01□□□□□ -1.77
TRAPPC11-208ENST00000511955 PLEKHA3Q9HB20 300 aa4.01□□□□□ -1.77
TRAPPC11-208ENST00000511955 PROK2Q9HC23 129 aa4.01□□□□□ -1.77
TRAPPC11-208ENST00000511955 C19orf73Q9NVV2 129 aa4.01□□□□□ -1.77
TRAPPC11-208ENST00000511955 USP9YO00507 2555 aaPredicted RBP4.01□□□□□ -1.77
TRAPPC11-208ENST00000511955 TMED7-TICAM2A0A0A6YYA0 188 aa4.01□□□□□ -1.77
TRAPPC11-208ENST00000511955 TRGV8A0A0C4DH27 118 aa4.01□□□□□ -1.77
TRAPPC11-208ENST00000511955 C7orf71A4D174 169 aa4.01□□□□□ -1.77
TRAPPC11-208ENST00000511955 RBMY1BA6NDE4 496 aaKnown RBP4.01□□□□□ -1.77
TRAPPC11-208ENST00000511955 RBMY1EA6NEQ0 496 aaKnown RBP4.01□□□□□ -1.77
TRAPPC11-208ENST00000511955 C8orf87E5RJ46 101 aa4.01□□□□□ -1.77
TRAPPC11-208ENST00000511955 AGPAT2O15120 278 aa4.01□□□□□ -1.77
TRAPPC11-208ENST00000511955 DUS4LO95620 317 aaKnown RBP4.01□□□□□ -1.77
TRAPPC11-208ENST00000511955 IGHMP01871 453 aa4.01□□□□□ -1.77
TRAPPC11-208ENST00000511955 MMP7P09237 267 aaPredicted RBP4.01□□□□□ -1.77
TRAPPC11-208ENST00000511955 RBMY1DP0C7P1 496 aaKnown RBP4.01□□□□□ -1.77
TRAPPC11-208ENST00000511955 RBMY1A1P0DJD3 496 aaKnown RBP4.01□□□□□ -1.77
TRAPPC11-208ENST00000511955 SLC25A4P12235 298 aa4.01□□□□□ -1.77
TRAPPC11-208ENST00000511955 GUCA1AP43080 201 aaPredicted RBP4.01□□□□□ -1.77
TRAPPC11-208ENST00000511955 ZNF92Q03936 586 aa4.01□□□□□ -1.77
TRAPPC11-208ENST00000511955 DAZ2Q13117 558 aaKnown RBP4.01□□□□□ -1.77
TRAPPC11-208ENST00000511955 KLF9Q13886 244 aaPredicted RBP4.01□□□□□ -1.77
TRAPPC11-208ENST00000511955 DAZ4Q86SG3 579 aaKnown RBP4.01□□□□□ -1.77
TRAPPC11-208ENST00000511955 LINC00482Q8N8I6 264 aa4.01□□□□□ -1.77
TRAPPC11-208ENST00000511955 SFXN3Q9BWM7 321 aa4.01□□□□□ -1.77
TRAPPC11-208ENST00000511955 WDR13Q9H1Z4 485 aa4.01□□□□□ -1.77
TRAPPC11-208ENST00000511955 IFI27L2Q9H2X8 130 aa4.01□□□□□ -1.77
TRAPPC11-208ENST00000511955 DAZ1Q9NQZ3 744 aaKnown RBP4.01□□□□□ -1.77
TRAPPC11-208ENST00000511955 DAZ3Q9NR90 486 aaKnown RBP4.01□□□□□ -1.77
TRAPPC11-208ENST00000511955 ZNF586Q9NXT0 402 aa4.01□□□□□ -1.77
TRAPPC11-208ENST00000511955 ZNF226Q9NYT6 803 aa4.01□□□□□ -1.77
TRAPPC11-208ENST00000511955 ZNF257Q9Y2Q1 563 aa4.01□□□□□ -1.77
TRAPPC11-208ENST00000511955 DCHS2Q6V1P9 2916 aa4.01□□□□□ -1.77
TRAPPC11-208ENST00000511955 CELSR2Q9HCU4 2923 aa4.01□□□□□ -1.77
TRAPPC11-208ENST00000511955 BAHCC1Q9P281 2608 aa4.01□□□□□ -1.77
TRAPPC11-208ENST00000511955 DNAJC13O75165 2243 aa4□□□□□ -1.77
TRAPPC11-208ENST00000511955 PLAC8L1A1L4L8 177 aa4□□□□□ -1.77
TRAPPC11-208ENST00000511955 KNCNA6PVL3 124 aa4□□□□□ -1.77
TRAPPC11-208ENST00000511955 GSTZ1O43708 216 aaPredicted RBP4□□□□□ -1.77
TRAPPC11-208ENST00000511955 RAMP1O60894 148 aa4□□□□□ -1.77
TRAPPC11-208ENST00000511955 GPX1P07203 203 aa4□□□□□ -1.77
TRAPPC11-208ENST00000511955 SEC61BP60468 96 aaKnown RBP4□□□□□ -1.77
TRAPPC11-208ENST00000511955 ZNF117Q03924 483 aa4□□□□□ -1.77
TRAPPC11-208ENST00000511955 RIGQ13278 110 aa4□□□□□ -1.77
TRAPPC11-208ENST00000511955 NSUN5P1Q3KNT7 163 aa4□□□□□ -1.77
TRAPPC11-208ENST00000511955 COA6Q5JTJ3 125 aaKnown RBP4□□□□□ -1.77
TRAPPC11-208ENST00000511955 SLC25A30Q5SVS4 291 aa4□□□□□ -1.77
TRAPPC11-208ENST00000511955 SLC25A26Q70HW3 274 aa4□□□□□ -1.77
TRAPPC11-208ENST00000511955 DEFB125Q8N687 156 aa4□□□□□ -1.77
TRAPPC11-208ENST00000511955 ZFP62Q8NB50 900 aaPredicted RBP4□□□□□ -1.77
TRAPPC11-208ENST00000511955 OR4C12Q96R67 309 aa4□□□□□ -1.77
TRAPPC11-208ENST00000511955 METTL26Q96S19 204 aa4□□□□□ -1.77
TRAPPC11-208ENST00000511955 GGTLC1Q9BX51 225 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms