RNA–Protein interactions for RNA: ENST00000511653.1

COPS4-209, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 1 (best) BASIC

Gene COPS4, Length 1,695 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-209ENST00000511653 SFXN4Q6P4A7 337 aa4.81□□□□□ -1.64
COPS4-209ENST00000511653 SPSB3Q6PJ21 355 aa4.81□□□□□ -1.64
COPS4-209ENST00000511653 HOGA1Q86XE5 327 aa4.81□□□□□ -1.64
COPS4-209ENST00000511653 FAM24BQ8N5W8 94 aa4.81□□□□□ -1.64
COPS4-209ENST00000511653 OR1L8Q8NGR8 309 aa4.81□□□□□ -1.64
COPS4-209ENST00000511653 LSM10Q969L4 123 aaKnown RBP4.81□□□□□ -1.64
COPS4-209ENST00000511653 MFFQ9GZY8 342 aa4.81□□□□□ -1.64
COPS4-209ENST00000511653 NDUFA4L2Q9NRX3 87 aa4.81□□□□□ -1.64
COPS4-209ENST00000511653 TXNL4BQ9NX01 149 aaKnown RBP4.81□□□□□ -1.64
COPS4-209ENST00000511653 TRAV18A0A075B6X5 111 aa4.8□□□□□ -1.64
COPS4-209ENST00000511653 IGLL5B9A064 214 aa4.8□□□□□ -1.64
COPS4-209ENST00000511653 NUPL2O15504 423 aaKnown RBP4.8□□□□□ -1.64
COPS4-209ENST00000511653 XRCC3O43542 346 aa4.8□□□□□ -1.64
COPS4-209ENST00000511653 PFDN1O60925 122 aa4.8□□□□□ -1.64
COPS4-209ENST00000511653 APOHP02749 345 aaPredicted RBP4.8□□□□□ -1.64
COPS4-209ENST00000511653 IFNA4P05014 189 aa4.8□□□□□ -1.64
COPS4-209ENST00000511653 GIG44P09565 113 aaPredicted RBP4.8□□□□□ -1.64
COPS4-209ENST00000511653 GNRHRP30968 328 aa4.8□□□□□ -1.64
COPS4-209ENST00000511653 AMTP48728 403 aa4.8□□□□□ -1.64
COPS4-209ENST00000511653 LEMD1Q68G75 181 aa4.8□□□□□ -1.64
COPS4-209ENST00000511653 THOC7Q6I9Y2 204 aaKnown RBP4.8□□□□□ -1.64
COPS4-209ENST00000511653 WDR73Q6P4I2 378 aa4.8□□□□□ -1.64
COPS4-209ENST00000511653 Q8NAQ8 132 aa4.8□□□□□ -1.64
COPS4-209ENST00000511653 FCAMRQ8WWV6 532 aa4.8□□□□□ -1.64
COPS4-209ENST00000511653 OR10C1Q96KK4 312 aa4.8□□□□□ -1.64
COPS4-209ENST00000511653 C6orf62Q9GZU0 229 aaPredicted RBP4.8□□□□□ -1.64
COPS4-209ENST00000511653 RNF167Q9H6Y7 350 aa4.8□□□□□ -1.64
COPS4-209ENST00000511653 COMMD9Q9P000 198 aa4.8□□□□□ -1.64
COPS4-209ENST00000511653 RSL24D1Q9UHA3 163 aaKnown RBP4.8□□□□□ -1.64
COPS4-209ENST00000511653 IGHV3-66A0A0C4DH42 116 aa4.8□□□□□ -1.64
COPS4-209ENST00000511653 I3L2K1 104 aa4.8□□□□□ -1.64
COPS4-209ENST00000511653 SCGNO76038 276 aa4.8□□□□□ -1.64
COPS4-209ENST00000511653 YIF1AO95070 293 aa4.8□□□□□ -1.64
COPS4-209ENST00000511653 KRASP01116 189 aa4.8□□□□□ -1.64
COPS4-209ENST00000511653 RBMY1A1P0DJD3 496 aaKnown RBP4.8□□□□□ -1.64
COPS4-209ENST00000511653 RBMY1CP0DJD4 496 aa4.8□□□□□ -1.64
COPS4-209ENST00000511653 G6PCP35575 357 aa4.8□□□□□ -1.64
COPS4-209ENST00000511653 ERVK-16P61578 105 aa4.8□□□□□ -1.64
COPS4-209ENST00000511653 MXD1Q05195 221 aa4.8□□□□□ -1.64
COPS4-209ENST00000511653 RBMY1FQ15415 496 aaKnown RBP4.8□□□□□ -1.64
COPS4-209ENST00000511653 KCTD21Q4G0X4 260 aa4.8□□□□□ -1.64
COPS4-209ENST00000511653 Q6ZTC4 211 aa4.8□□□□□ -1.64
COPS4-209ENST00000511653 TCF24Q7RTU0 167 aa4.8□□□□□ -1.64
COPS4-209ENST00000511653 HSD17B13Q7Z5P4 300 aaPredicted RBP4.8□□□□□ -1.64
COPS4-209ENST00000511653 CNBD2Q96M20 576 aa4.8□□□□□ -1.64
COPS4-209ENST00000511653 ATP6V0BQ99437 205 aa4.8□□□□□ -1.64
COPS4-209ENST00000511653 FXYD6Q9H0Q3 95 aa4.8□□□□□ -1.64
COPS4-209ENST00000511653 AUNIPQ9H7T9 357 aa4.8□□□□□ -1.64
COPS4-209ENST00000511653 RABL2BQ9UNT1 228 aa4.8□□□□□ -1.64
COPS4-209ENST00000511653 OR51B2Q9Y5P1 312 aa4.8□□□□□ -1.64
COPS4-209ENST00000511653 HERC1Q15751 4861 aa4.79□□□□□ -1.64
COPS4-209ENST00000511653 C15orf61A6NNL5 157 aa4.79□□□□□ -1.64
COPS4-209ENST00000511653 CYB5BO43169 146 aa4.79□□□□□ -1.64
COPS4-209ENST00000511653 C4BPBP20851 252 aa4.79□□□□□ -1.64
COPS4-209ENST00000511653 F2RP25116 425 aa4.79□□□□□ -1.64
COPS4-209ENST00000511653 PSMB9P28065 219 aa4.79□□□□□ -1.64
COPS4-209ENST00000511653 HLA-DMBP28068 263 aa4.79□□□□□ -1.64
COPS4-209ENST00000511653 FGF9P31371 208 aaPredicted RBP4.79□□□□□ -1.64
COPS4-209ENST00000511653 SDC2P34741 201 aa4.79□□□□□ -1.64
COPS4-209ENST00000511653 LPAR6P43657 344 aa4.79□□□□□ -1.64
COPS4-209ENST00000511653 DEFB131AP59861 70 aa4.79□□□□□ -1.64
COPS4-209ENST00000511653 TMEM187Q14656 261 aa4.79□□□□□ -1.64
COPS4-209ENST00000511653 ZNF575Q86XF7 245 aa4.79□□□□□ -1.64
COPS4-209ENST00000511653 OR5AP2Q8NGF4 316 aa4.79□□□□□ -1.64
COPS4-209ENST00000511653 OR1P1Q8NH06 330 aa4.79□□□□□ -1.64
COPS4-209ENST00000511653 GIMAP1Q8WWP7 306 aa4.79□□□□□ -1.64
COPS4-209ENST00000511653 SLC25A46Q96AG3 418 aa4.79□□□□□ -1.64
COPS4-209ENST00000511653 SCRT1Q9BWW7 348 aa4.79□□□□□ -1.64
COPS4-209ENST00000511653 NXF2Q9GZY0 626 aaKnown RBP4.79□□□□□ -1.64
COPS4-209ENST00000511653 MS4A6AQ9H2W1 248 aa4.79□□□□□ -1.64
COPS4-209ENST00000511653 EHFQ9NZC4 300 aa4.79□□□□□ -1.64
COPS4-209ENST00000511653 DMBT1Q9UGM3 2413 aaPredicted RBP4.78□□□□□ -1.64
COPS4-209ENST00000511653 IGHV4-4A0A075B6R2 117 aa4.78□□□□□ -1.64
COPS4-209ENST00000511653 IGLV5-52A0A0A0MRZ9 124 aa4.78□□□□□ -1.64
COPS4-209ENST00000511653 TRAV14DV4A0A0A6YYC5 116 aa4.78□□□□□ -1.64
COPS4-209ENST00000511653 BOLA2-SMG1P6H3BVE0 249 aa4.78□□□□□ -1.64
COPS4-209ENST00000511653 RTL8CO15255 209 aa4.78□□□□□ -1.64
COPS4-209ENST00000511653 MRPS14O60783 128 aaKnown RBP4.78□□□□□ -1.64
COPS4-209ENST00000511653 PGLYRP1O75594 196 aaPredicted RBP4.78□□□□□ -1.64
COPS4-209ENST00000511653 DFFBO76075 338 aa4.78□□□□□ -1.64
COPS4-209ENST00000511653 MT-CO2P00403 227 aa4.78□□□□□ -1.64
COPS4-209ENST00000511653 TCTAP57738 103 aa4.78□□□□□ -1.64
COPS4-209ENST00000511653 HERV-K104P61576 105 aa4.78□□□□□ -1.64
COPS4-209ENST00000511653 RELQ04864 619 aaPredicted RBP4.78□□□□□ -1.64
COPS4-209ENST00000511653 UBE2UQ5VVX9 321 aa4.78□□□□□ -1.64
COPS4-209ENST00000511653 TOMM20LQ6UXN7 152 aa4.78□□□□□ -1.64
COPS4-209ENST00000511653 TSPAN14Q8NG11 270 aa4.78□□□□□ -1.64
COPS4-209ENST00000511653 MOB3AQ96BX8 217 aa4.78□□□□□ -1.64
COPS4-209ENST00000511653 KRTAP4-5Q9BYR2 181 aa4.78□□□□□ -1.64
COPS4-209ENST00000511653 VSIRQ9H7M9 311 aa4.78□□□□□ -1.64
COPS4-209ENST00000511653 TMEM14BQ9NUH8 114 aa4.78□□□□□ -1.64
COPS4-209ENST00000511653 CELA1Q9UNI1 258 aa4.78□□□□□ -1.64
COPS4-209ENST00000511653 ST8SIA3O43173 380 aa4.77□□□□□ -1.65
COPS4-209ENST00000511653 IGKV1-39P01597 117 aa4.77□□□□□ -1.65
COPS4-209ENST00000511653 PMP2P02689 132 aa4.77□□□□□ -1.65
COPS4-209ENST00000511653 IGKV1D-39P04432 117 aa4.77□□□□□ -1.65
COPS4-209ENST00000511653 SPINK9Q5DT21 86 aa4.77□□□□□ -1.65
COPS4-209ENST00000511653 IDNKQ5T6J7 187 aa4.77□□□□□ -1.65
COPS4-209ENST00000511653 ZNF767PQ75MW2 155 aa4.77□□□□□ -1.65
COPS4-209ENST00000511653 TRPT1Q86TN4 253 aaKnown RBP4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms