RNA–Protein interactions for RNA: ENST00000511628.1

CHD1-207, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-207ENST00000511628 OR13D1Q8NGV5 346 aa0.92□□□□□ -2.26
CHD1-207ENST00000511628 OR10X1Q8NGY0 326 aa0.92□□□□□ -2.26
CHD1-207ENST00000511628 KIFC1Q9BW19 673 aa0.92□□□□□ -2.26
CHD1-207ENST00000511628 ARFGEF3Q5TH69 2177 aa0.91□□□□□ -2.26
CHD1-207ENST00000511628 MYH7BA7E2Y1 1941 aa0.91□□□□□ -2.26
CHD1-207ENST00000511628 RIC1Q4ADV7 1423 aa0.91□□□□□ -2.26
CHD1-207ENST00000511628 ADGRL3Q9HAR2 1447 aa0.91□□□□□ -2.26
CHD1-207ENST00000511628 OR4E1P0C645 316 aa0.91□□□□□ -2.26
CHD1-207ENST00000511628 MIFP14174 115 aa0.91□□□□□ -2.26
CHD1-207ENST00000511628 S100A4P26447 101 aaKnown RBP0.91□□□□□ -2.26
CHD1-207ENST00000511628 SSR2P43308 183 aa0.91□□□□□ -2.26
CHD1-207ENST00000511628 CTAG1AP78358 180 aa0.91□□□□□ -2.26
CHD1-207ENST00000511628 MRPS15P82914 257 aaKnown RBP0.91□□□□□ -2.26
CHD1-207ENST00000511628 SPA17Q15506 151 aa0.91□□□□□ -2.26
CHD1-207ENST00000511628 TAF1AQ15573 450 aaPredicted RBP0.91□□□□□ -2.26
CHD1-207ENST00000511628 LIN52Q52LA3 116 aa0.91□□□□□ -2.26
CHD1-207ENST00000511628 TEX36Q5VZQ5 186 aa0.91□□□□□ -2.26
CHD1-207ENST00000511628 RPS19BP1Q86WX3 136 aaKnown RBP0.91□□□□□ -2.26
CHD1-207ENST00000511628 LINC00311Q8N616 119 aa0.91□□□□□ -2.26
CHD1-207ENST00000511628 OR11H6Q8NGC7 330 aa0.91□□□□□ -2.26
CHD1-207ENST00000511628 OR8D4Q8NGM9 314 aa0.91□□□□□ -2.26
CHD1-207ENST00000511628 STAG3L4Q8TBR4 150 aa0.91□□□□□ -2.26
CHD1-207ENST00000511628 CHMP6Q96FZ7 201 aa0.91□□□□□ -2.26
CHD1-207ENST00000511628 C2orf50Q96LR7 162 aa0.91□□□□□ -2.26
CHD1-207ENST00000511628 SERPINI1Q99574 410 aa0.91□□□□□ -2.26
CHD1-207ENST00000511628 C9orf16Q9BUW7 83 aa0.91□□□□□ -2.26
CHD1-207ENST00000511628 ENY2Q9NPA8 101 aa0.91□□□□□ -2.26
CHD1-207ENST00000511628 FAM32AQ9Y421 112 aaKnown RBP0.91□□□□□ -2.26
CHD1-207ENST00000511628 EXPH5Q8NEV8 1989 aa0.9□□□□□ -2.26
CHD1-207ENST00000511628 KIF1BO60333 1816 aa0.9□□□□□ -2.27
CHD1-207ENST00000511628 DLG5Q8TDM6 1919 aa0.9□□□□□ -2.27
CHD1-207ENST00000511628 A0A087X0T9 212 aa0.9□□□□□ -2.27
CHD1-207ENST00000511628 TRAV4A0A0B4J268 109 aa0.9□□□□□ -2.27
CHD1-207ENST00000511628 TCL1BO95988 128 aa0.9□□□□□ -2.27
CHD1-207ENST00000511628 MGST1P10620 155 aaKnown RBP0.9□□□□□ -2.27
CHD1-207ENST00000511628 ATP5G3P48201 142 aa0.9□□□□□ -2.27
CHD1-207ENST00000511628 DEFB113Q30KQ7 82 aa0.9□□□□□ -2.27
CHD1-207ENST00000511628 AKIRIN2Q53H80 203 aa0.9□□□□□ -2.27
CHD1-207ENST00000511628 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.9□□□□□ -2.27
CHD1-207ENST00000511628 TRAPPC6BQ86SZ2 158 aa0.9□□□□□ -2.27
CHD1-207ENST00000511628 LINC00471Q8N535 108 aa0.9□□□□□ -2.27
CHD1-207ENST00000511628 GPR146Q96CH1 333 aa0.9□□□□□ -2.27
CHD1-207ENST00000511628 TMEM133Q9H2Q1 129 aa0.9□□□□□ -2.27
CHD1-207ENST00000511628 NMNAT1Q9HAN9 279 aaPredicted RBP0.9□□□□□ -2.27
CHD1-207ENST00000511628 MED9Q9NWA0 146 aa0.9□□□□□ -2.27
CHD1-207ENST00000511628 TVP23BQ9NYZ1 205 aa0.9□□□□□ -2.27
CHD1-207ENST00000511628 ARL2BPQ9Y2Y0 163 aa0.9□□□□□ -2.27
CHD1-207ENST00000511628 MED1Q15648 1581 aaPredicted RBP0.9□□□□□ -2.27
CHD1-207ENST00000511628 EML6Q6ZMW3 1958 aa0.9□□□□□ -2.27
CHD1-207ENST00000511628 ALPK2Q86TB3 2170 aa0.9□□□□□ -2.27
CHD1-207ENST00000511628 COL6A6A6NMZ7 2263 aa0.9□□□□□ -2.27
CHD1-207ENST00000511628 RTL1A6NKG5 1358 aa0.89□□□□□ -2.27
CHD1-207ENST00000511628 IGKV3-7A0A075B6H7 116 aa0.89□□□□□ -2.27
CHD1-207ENST00000511628 OR1I1O60431 355 aa0.89□□□□□ -2.27
CHD1-207ENST00000511628 LYZL6O75951 148 aa0.89□□□□□ -2.27
CHD1-207ENST00000511628 ANGP03950 147 aaKnown RBP0.89□□□□□ -2.27
CHD1-207ENST00000511628 ERP29P30040 261 aaKnown RBP0.89□□□□□ -2.27
CHD1-207ENST00000511628 RNASE4P34096 147 aaKnown RBP0.89□□□□□ -2.27
CHD1-207ENST00000511628 PIGPP57054 158 aa0.89□□□□□ -2.27
CHD1-207ENST00000511628 YPEL3P61236 119 aaPredicted RBP0.89□□□□□ -2.27
CHD1-207ENST00000511628 C3orf56Q8N813 242 aa0.89□□□□□ -2.27
CHD1-207ENST00000511628 BTF3L4Q96K17 158 aa0.89□□□□□ -2.27
CHD1-207ENST00000511628 MIXL1Q9H2W2 232 aa0.89□□□□□ -2.27
CHD1-207ENST00000511628 PARVBQ9HBI1 364 aa0.89□□□□□ -2.27
CHD1-207ENST00000511628 ARMC1Q9NVT9 282 aa0.89□□□□□ -2.27
CHD1-207ENST00000511628 TAS2R4Q9NYW5 299 aa0.89□□□□□ -2.27
CHD1-207ENST00000511628 OR5AC2Q9NZP5 309 aa0.89□□□□□ -2.27
CHD1-207ENST00000511628 OPTCQ9UBM4 332 aa0.89□□□□□ -2.27
CHD1-207ENST00000511628 EPDR1Q9UM22 224 aa0.89□□□□□ -2.27
CHD1-207ENST00000511628 UTP11Q9Y3A2 253 aaKnown RBP0.89□□□□□ -2.27
CHD1-207ENST00000511628 SOX21Q9Y651 276 aaPredicted RBP0.89□□□□□ -2.27
CHD1-207ENST00000511628 CEP192Q8TEP8 1941 aa0.89□□□□□ -2.27
CHD1-207ENST00000511628 TNRC6BQ9UPQ9 1833 aaKnown RBP0.89□□□□□ -2.27
CHD1-207ENST00000511628 SBF1O95248 1867 aa0.88□□□□□ -2.27
CHD1-207ENST00000511628 IGKV2-40A0A087WW87 121 aaPredicted RBP0.88□□□□□ -2.27
CHD1-207ENST00000511628 FUOMA2VDF0 154 aa0.88□□□□□ -2.27
CHD1-207ENST00000511628 C19orf84I3L1E1 186 aa0.88□□□□□ -2.27
CHD1-207ENST00000511628 CYB5BO43169 146 aa0.88□□□□□ -2.27
CHD1-207ENST00000511628 OR2B3O76000 313 aa0.88□□□□□ -2.27
CHD1-207ENST00000511628 IGKV2D-40P01614 121 aaPredicted RBP0.88□□□□□ -2.27
CHD1-207ENST00000511628 BRS3P32247 399 aa0.88□□□□□ -2.27
CHD1-207ENST00000511628 PDE6HQ13956 83 aa0.88□□□□□ -2.27
CHD1-207ENST00000511628 TSNQ15631 228 aaKnown RBP0.88□□□□□ -2.27
CHD1-207ENST00000511628 SPANXN5Q5MJ07 72 aa0.88□□□□□ -2.27
CHD1-207ENST00000511628 BRMS1LQ5PSV4 323 aa0.88□□□□□ -2.27
CHD1-207ENST00000511628 GOLT1AQ6ZVE7 132 aa0.88□□□□□ -2.27
CHD1-207ENST00000511628 PHF13Q86YI8 300 aaPredicted RBP0.88□□□□□ -2.27
CHD1-207ENST00000511628 GNPDA2Q8TDQ7 276 aa0.88□□□□□ -2.27
CHD1-207ENST00000511628 HIST1H2BLQ99880 126 aa0.88□□□□□ -2.27
CHD1-207ENST00000511628 RNF122Q9H9V4 155 aa0.88□□□□□ -2.27
CHD1-207ENST00000511628 ARHGEF28Q8N1W1 1705 aaKnown RBP0.88□□□□□ -2.27
CHD1-207ENST00000511628 CAMSAP1Q5T5Y3 1602 aa0.88□□□□□ -2.27
CHD1-207ENST00000511628 OBSL1O75147 1896 aa0.88□□□□□ -2.27
CHD1-207ENST00000511628 DENND4CQ5VZ89 1909 aa0.87□□□□□ -2.27
CHD1-207ENST00000511628 SCN8AQ9UQD0 1980 aa0.87□□□□□ -2.27
CHD1-207ENST00000511628 DIDO1Q9BTC0 2240 aaKnown RBP0.87□□□□□ -2.27
CHD1-207ENST00000511628 RIMBP3CA6NJZ7 1639 aa0.87□□□□□ -2.27
CHD1-207ENST00000511628 RIMBP3BA6NNM3 1639 aa0.87□□□□□ -2.27
CHD1-207ENST00000511628 RIMBP3Q9UFD9 1639 aa0.87□□□□□ -2.27
CHD1-207ENST00000511628 HMGB3O15347 200 aaKnown RBP0.87□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms