RNA–Protein interactions for RNA: ENST00000510626.5

HTT-208, Transcript of huntingtin, humanhuman

TSL 1 (best)

Gene HTT, Length 14,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-208ENST00000510626 TMEM86BQ8N661 226 aa7.05□□□□□ -1.28
HTT-208ENST00000510626 NPIPB3Q92617 1050 aa7.05□□□□□ -1.28
HTT-208ENST00000510626 EPDR1Q9UM22 224 aa7.05□□□□□ -1.28
HTT-208ENST00000510626 FOXA2Q9Y261 457 aaPredicted RBP7.05□□□□□ -1.28
HTT-208ENST00000510626 MSGN1A6NI15 193 aa7.05□□□□□ -1.28
HTT-208ENST00000510626 MYOD1P15172 320 aa7.05□□□□□ -1.28
HTT-208ENST00000510626 IFI27L1Q96BM0 104 aa7.05□□□□□ -1.28
HTT-208ENST00000510626 PLPPR2Q96GM1 343 aa7.05□□□□□ -1.28
HTT-208ENST00000510626 ZNF497Q6ZNH5 498 aa7.04□□□□□ -1.28
HTT-208ENST00000510626 ZNF56Q15929 161 aa7.04□□□□□ -1.28
HTT-208ENST00000510626 CCDC168Q8NDH2 2452 aa7.04□□□□□ -1.28
HTT-208ENST00000510626 IGKV3-11P04433 115 aa7.04□□□□□ -1.28
HTT-208ENST00000510626 C8orf46Q8TAG6 207 aa7.04□□□□□ -1.28
HTT-208ENST00000510626 NHP2Q9NX24 153 aaKnown RBP7.04□□□□□ -1.28
HTT-208ENST00000510626 OBSL1O75147 1896 aa7.04□□□□□ -1.28
HTT-208ENST00000510626 C2CD4DB7Z1M9 353 aa7.04□□□□□ -1.28
HTT-208ENST00000510626 TMEM95Q3KNT9 176 aa7.04□□□□□ -1.28
HTT-208ENST00000510626 UTF1Q5T230 341 aa7.04□□□□□ -1.28
HTT-208ENST00000510626 MRPL14Q6P1L8 145 aaKnown RBP7.04□□□□□ -1.28
HTT-208ENST00000510626 RNF166Q96A37 237 aaPredicted RBP7.04□□□□□ -1.28
HTT-208ENST00000510626 CFHR5Q9BXR6 569 aa7.04□□□□□ -1.28
HTT-208ENST00000510626 NDUFC2O95298 119 aa7.04□□□□□ -1.28
HTT-208ENST00000510626 FAM19A2Q8N3H0 131 aa7.04□□□□□ -1.28
HTT-208ENST00000510626 PSMB11A5LHX3 300 aa7.04□□□□□ -1.28
HTT-208ENST00000510626 HELZP42694 1942 aaKnown RBP7.04□□□□□ -1.28
HTT-208ENST00000510626 LYPD6BQ8NI32 183 aa7.04□□□□□ -1.28
HTT-208ENST00000510626 SEMA5BQ9P283 1151 aa7.04□□□□□ -1.28
HTT-208ENST00000510626 A0A1W2PR80 420 aa7.04□□□□□ -1.28
HTT-208ENST00000510626 PROB1E7EW31 1015 aa7.04□□□□□ -1.28
HTT-208ENST00000510626 PIMREGQ9BSJ6 248 aa7.04□□□□□ -1.28
HTT-208ENST00000510626 SHANK3Q9BYB0 1731 aa7.04□□□□□ -1.28
HTT-208ENST00000510626 AGRNO00468 2067 aa7.04□□□□□ -1.28
HTT-208ENST00000510626 GLMPQ8WWB7 406 aa7.04□□□□□ -1.28
HTT-208ENST00000510626 TTC28Q96AY4 2481 aa7.03□□□□□ -1.28
HTT-208ENST00000510626 B9A039 149 aa7.03□□□□□ -1.28
HTT-208ENST00000510626 MOSP00540 346 aa7.03□□□□□ -1.28
HTT-208ENST00000510626 UCNP55089 124 aa7.03□□□□□ -1.28
HTT-208ENST00000510626 C21orf62Q9NYP8 219 aa7.03□□□□□ -1.28
HTT-208ENST00000510626 IGHV2OR16-5A0A0B4J2B6 119 aa7.03□□□□□ -1.28
HTT-208ENST00000510626 CRISPLD2Q9H0B8 497 aa7.03□□□□□ -1.28
HTT-208ENST00000510626 IQCF6A8MYZ5 107 aa7.03□□□□□ -1.28
HTT-208ENST00000510626 SYS1-DBNDD2H3BUS1 97 aa7.03□□□□□ -1.28
HTT-208ENST00000510626 TIAF1O95411 115 aa7.03□□□□□ -1.28
HTT-208ENST00000510626 TPTE2P1Q5T6R2 138 aa7.03□□□□□ -1.28
HTT-208ENST00000510626 LINC01551Q86U37 167 aa7.03□□□□□ -1.28
HTT-208ENST00000510626 SHISA7A6NL88 538 aa7.03□□□□□ -1.28
HTT-208ENST00000510626 COL9A1P20849 921 aa7.03□□□□□ -1.28
HTT-208ENST00000510626 COL9A2Q14055 689 aaPredicted RBP7.03□□□□□ -1.28
HTT-208ENST00000510626 CSTL1Q9H114 145 aa7.03□□□□□ -1.28
HTT-208ENST00000510626 NRXN2Q9P2S2 1712 aa7.03□□□□□ -1.28
HTT-208ENST00000510626 TCF20Q9UGU0 1960 aaKnown RBP7.03□□□□□ -1.28
HTT-208ENST00000510626 PLXND1Q9Y4D7 1925 aa7.03□□□□□ -1.28
HTT-208ENST00000510626 TRGV11A0A075B6L2 103 aa7.03□□□□□ -1.28
HTT-208ENST00000510626 C9orf118A6NHY6 69 aa7.03□□□□□ -1.28
HTT-208ENST00000510626 C1orf185Q5T7R7 199 aa7.03□□□□□ -1.28
HTT-208ENST00000510626 LDLRAD4O15165 306 aa7.03□□□□□ -1.28
HTT-208ENST00000510626 KLF14Q8TD94 323 aaPredicted RBP7.03□□□□□ -1.28
HTT-208ENST00000510626 TRAV2A0A0B4J234 112 aa7.03□□□□□ -1.28
HTT-208ENST00000510626 KIR2DL5BA0A0G2JN68 375 aa7.03□□□□□ -1.28
HTT-208ENST00000510626 KIR2DL5BA0A0G2JPC4 375 aa7.03□□□□□ -1.28
HTT-208ENST00000510626 SPINK8P0C7L1 97 aa7.03□□□□□ -1.28
HTT-208ENST00000510626 TFF3Q07654 80 aa7.03□□□□□ -1.28
HTT-208ENST00000510626 KIR2DL5AQ8N109 375 aa7.03□□□□□ -1.28
HTT-208ENST00000510626 PHLDA1Q8WV24 401 aaPredicted RBP7.03□□□□□ -1.28
HTT-208ENST00000510626 TCRBV4S1A1TA0A5B7 111 aa7.03□□□□□ -1.28
HTT-208ENST00000510626 ABHD12Q8N2K0 398 aa7.03□□□□□ -1.28
HTT-208ENST00000510626 ATP6V0E2Q8NHE4 81 aa7.03□□□□□ -1.28
HTT-208ENST00000510626 NDUFA3O95167 84 aa7.03□□□□□ -1.28
HTT-208ENST00000510626 Q6ZT83 130 aa7.03□□□□□ -1.28
HTT-208ENST00000510626 PLA2G3Q9NZ20 509 aa7.03□□□□□ -1.28
HTT-208ENST00000510626 NOTCH2Q04721 2471 aa7.03□□□□□ -1.28
HTT-208ENST00000510626 IGHV3-13P01766 116 aa7.03□□□□□ -1.28
HTT-208ENST00000510626 IGHV3-7P01780 117 aa7.03□□□□□ -1.28
HTT-208ENST00000510626 ZNF815PA8K554 130 aa7.02□□□□□ -1.28
HTT-208ENST00000510626 PF4V1P10720 104 aa7.02□□□□□ -1.28
HTT-208ENST00000510626 PDLIM4P50479 330 aa7.02□□□□□ -1.28
HTT-208ENST00000510626 MESP2Q0VG99 397 aa7.02□□□□□ -1.28
HTT-208ENST00000510626 NMSQ5H8A3 153 aa7.02□□□□□ -1.28
HTT-208ENST00000510626 OR11H6Q8NGC7 330 aa7.02□□□□□ -1.28
HTT-208ENST00000510626 CCL13Q99616 98 aa7.02□□□□□ -1.28
HTT-208ENST00000510626 DTX4Q9Y2E6 619 aa7.02□□□□□ -1.28
HTT-208ENST00000510626 GPR179Q6PRD1 2367 aa7.02□□□□□ -1.29
HTT-208ENST00000510626 TECTAO75443 2155 aa7.02□□□□□ -1.29
HTT-208ENST00000510626 IGHV3OR15-7A0A075B7D8 119 aa7.02□□□□□ -1.29
HTT-208ENST00000510626 ADAMTS9Q9P2N4 1935 aa7.02□□□□□ -1.29
HTT-208ENST00000510626 TGIF1Q15583 401 aa7.02□□□□□ -1.29
HTT-208ENST00000510626 FOXA3P55318 350 aaPredicted RBP7.02□□□□□ -1.29
HTT-208ENST00000510626 WDR83OSQ9Y284 106 aa7.02□□□□□ -1.29
HTT-208ENST00000510626 TRAV5A0A0B4J249 113 aa7.02□□□□□ -1.29
HTT-208ENST00000510626 K7EP13 123 aa7.02□□□□□ -1.29
HTT-208ENST00000510626 UNQ5815/PRO19632Q6UWF5 114 aa7.02□□□□□ -1.29
HTT-208ENST00000510626 IL18BPO95998 194 aa7.02□□□□□ -1.29
HTT-208ENST00000510626 HLA-DMBP28068 263 aa7.02□□□□□ -1.29
HTT-208ENST00000510626 CMC4P56277 68 aaPredicted RBP7.02□□□□□ -1.29
HTT-208ENST00000510626 WIPF2Q8TF74 440 aaPredicted RBP7.02□□□□□ -1.29
HTT-208ENST00000510626 WFDC6Q9BQY6 131 aa7.02□□□□□ -1.29
HTT-208ENST00000510626 LOC105371242A0A075B767 164 aa7.02□□□□□ -1.29
HTT-208ENST00000510626 CRYBA2P53672 197 aa7.01□□□□□ -1.29
HTT-208ENST00000510626 GUSBP1Q15486 140 aa7.01□□□□□ -1.29
HTT-208ENST00000510626 EFNB3Q15768 340 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms