RNA–Protein interactions for RNA: ENST00000510569.5

NUP54-209, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-209ENST00000510569 HSD17B12Q53GQ0 312 aa2.51□□□□□ -2.01
NUP54-209ENST00000510569 GLYATL3Q5SZD4 288 aa2.51□□□□□ -2.01
NUP54-209ENST00000510569 LCN12Q6JVE5 192 aa2.51□□□□□ -2.01
NUP54-209ENST00000510569 EXOC3-AS1Q8N2X6 119 aa2.51□□□□□ -2.01
NUP54-209ENST00000510569 C12orf45Q8N5I9 185 aaPredicted RBP2.51□□□□□ -2.01
NUP54-209ENST00000510569 LINC00337Q8N6G1 96 aa2.51□□□□□ -2.01
NUP54-209ENST00000510569 TMEM252Q8N6L7 170 aa2.51□□□□□ -2.01
NUP54-209ENST00000510569 OR5A2Q8NGI9 324 aa2.51□□□□□ -2.01
NUP54-209ENST00000510569 OR52P1PQ8NH57 321 aa2.51□□□□□ -2.01
NUP54-209ENST00000510569 RXFP4Q8TDU9 374 aa2.51□□□□□ -2.01
NUP54-209ENST00000510569 MCEEQ96PE7 176 aa2.51□□□□□ -2.01
NUP54-209ENST00000510569 PRADC1Q9BSG0 188 aa2.51□□□□□ -2.01
NUP54-209ENST00000510569 RTL8AQ9BWD3 113 aa2.51□□□□□ -2.01
NUP54-209ENST00000510569 MRPL20Q9BYC9 149 aaKnown RBP2.51□□□□□ -2.01
NUP54-209ENST00000510569 FAM49BQ9NUQ9 324 aa2.51□□□□□ -2.01
NUP54-209ENST00000510569 LINC00527Q9UJ94 153 aa2.51□□□□□ -2.01
NUP54-209ENST00000510569 TNFSF18Q9UNG2 199 aa2.51□□□□□ -2.01
NUP54-209ENST00000510569 NEUROG3Q9Y4Z2 214 aa2.51□□□□□ -2.01
NUP54-209ENST00000510569 DOCK3Q8IZD9 2030 aa2.51□□□□□ -2.01
NUP54-209ENST00000510569 ANKRD36A6QL64 1941 aa2.5□□□□□ -2.01
NUP54-209ENST00000510569 PLXNA3P51805 1871 aa2.5□□□□□ -2.01
NUP54-209ENST00000510569 KIAA1671Q9BY89 1806 aa2.5□□□□□ -2.01
NUP54-209ENST00000510569 TRAV30A0A087WSZ9 112 aa2.5□□□□□ -2.01
NUP54-209ENST00000510569 SMIM26A0A096LP01 95 aa2.5□□□□□ -2.01
NUP54-209ENST00000510569 IGHV6-1A0A0B4J1U7 121 aa2.5□□□□□ -2.01
NUP54-209ENST00000510569 IGKV1-8A0A0C4DH67 115 aa2.5□□□□□ -2.01
NUP54-209ENST00000510569 IGHV1-69-2A0A0G2JMI3 117 aa2.5□□□□□ -2.01
NUP54-209ENST00000510569 SMIM31A0A1B0GVY4 71 aa2.5□□□□□ -2.01
NUP54-209ENST00000510569 A0A1B0GW64 132 aa2.5□□□□□ -2.01
NUP54-209ENST00000510569 TRDV1A0A1B0GX56 115 aa2.5□□□□□ -2.01
NUP54-209ENST00000510569 TMEM218A2RU14 115 aa2.5□□□□□ -2.01
NUP54-209ENST00000510569 IFITM5A6NNB3 132 aa2.5□□□□□ -2.01
NUP54-209ENST00000510569 J3QRK9 145 aa2.5□□□□□ -2.01
NUP54-209ENST00000510569 OVOL1O14753 267 aa2.5□□□□□ -2.01
NUP54-209ENST00000510569 DPM2O94777 84 aa2.5□□□□□ -2.01
NUP54-209ENST00000510569 CXorf1O96002 111 aa2.5□□□□□ -2.01
NUP54-209ENST00000510569 UCHL1P09936 223 aa2.5□□□□□ -2.01
NUP54-209ENST00000510569 OR4Q2P0C623 313 aa2.5□□□□□ -2.01
NUP54-209ENST00000510569 P0DMU3 169 aa2.5□□□□□ -2.01
NUP54-209ENST00000510569 FAM231AP0DMU4 169 aa2.5□□□□□ -2.01
NUP54-209ENST00000510569 FAM231CP0DMU5 169 aa2.5□□□□□ -2.01
NUP54-209ENST00000510569 IGHV3-43DP0DP04 118 aa2.5□□□□□ -2.01
NUP54-209ENST00000510569 BCL2P10415 239 aa2.5□□□□□ -2.01
NUP54-209ENST00000510569 CTSEP14091 401 aa2.5□□□□□ -2.01
NUP54-209ENST00000510569 POLR2IP36954 125 aaKnown RBP2.5□□□□□ -2.01
NUP54-209ENST00000510569 CCR2P41597 374 aa2.5□□□□□ -2.01
NUP54-209ENST00000510569 GNG4P50150 75 aa2.5□□□□□ -2.01
NUP54-209ENST00000510569 ZNF138P52744 262 aa2.5□□□□□ -2.01
NUP54-209ENST00000510569 MP68P56378 58 aa2.5□□□□□ -2.01
NUP54-209ENST00000510569 SYNJ2BPP57105 145 aa2.5□□□□□ -2.01
NUP54-209ENST00000510569 TAS2R19P59542 299 aa2.5□□□□□ -2.01
NUP54-209ENST00000510569 UBE2NP61088 152 aaKnown RBP2.5□□□□□ -2.01
NUP54-209ENST00000510569 PPP1CAP62136 330 aa2.5□□□□□ -2.01
NUP54-209ENST00000510569 KIAA0087Q14695 138 aa2.5□□□□□ -2.01
NUP54-209ENST00000510569 UBE2NLQ5JXB2 153 aa2.5□□□□□ -2.01
NUP54-209ENST00000510569 LDLRAD2Q5SZI1 272 aa2.5□□□□□ -2.01
NUP54-209ENST00000510569 DNAJC24Q6P3W2 148 aa2.5□□□□□ -2.01
NUP54-209ENST00000510569 RASL11AQ6T310 242 aa2.5□□□□□ -2.01
NUP54-209ENST00000510569 ACP7Q6ZNF0 438 aa2.5□□□□□ -2.01
NUP54-209ENST00000510569 ZNF493Q6ZR52 646 aa2.5□□□□□ -2.01
NUP54-209ENST00000510569 LINC00173Q6ZV60 143 aa2.5□□□□□ -2.01
NUP54-209ENST00000510569 C9orf62Q8N4C0 152 aa2.5□□□□□ -2.01
NUP54-209ENST00000510569 TCTEX1D1Q8N7M0 179 aa2.5□□□□□ -2.01
NUP54-209ENST00000510569 OR2T27Q8NH04 317 aa2.5□□□□□ -2.01
NUP54-209ENST00000510569 KLK6Q92876 244 aa2.5□□□□□ -2.01
NUP54-209ENST00000510569 TMEM159Q96B96 161 aa2.5□□□□□ -2.01
NUP54-209ENST00000510569 FXYD5Q96DB9 178 aa2.5□□□□□ -2.01
NUP54-209ENST00000510569 SLAMF6Q96DU3 332 aa2.5□□□□□ -2.01
NUP54-209ENST00000510569 IGF2BP2-AS1Q96M15 143 aa2.5□□□□□ -2.01
NUP54-209ENST00000510569 TRIB3Q96RU7 358 aa2.5□□□□□ -2.01
NUP54-209ENST00000510569 NMNAT3Q96T66 252 aa2.5□□□□□ -2.01
NUP54-209ENST00000510569 LINC01587Q99440 93 aa2.5□□□□□ -2.01
NUP54-209ENST00000510569 HSD17B10Q99714 261 aaKnown RBP2.5□□□□□ -2.01
NUP54-209ENST00000510569 NRIP2Q9BQI9 281 aa2.5□□□□□ -2.01
NUP54-209ENST00000510569 SAMD10Q9BYL1 202 aa2.5□□□□□ -2.01
NUP54-209ENST00000510569 CXorf21Q9HAI6 301 aa2.5□□□□□ -2.01
NUP54-209ENST00000510569 OR5AC2Q9NZP5 309 aa2.5□□□□□ -2.01
NUP54-209ENST00000510569 METTL1Q9UBP6 276 aaKnown RBP2.5□□□□□ -2.01
NUP54-209ENST00000510569 NYNRINQ9P2P1 1898 aaKnown RBP2.5□□□□□ -2.01
NUP54-209ENST00000510569 PDE4DIPQ5VU43 2346 aa2.5□□□□□ -2.01
NUP54-209ENST00000510569 DOCK9Q9BZ29 2069 aa2.49□□□□□ -2.01
NUP54-209ENST00000510569 SCN10AQ9Y5Y9 1956 aa2.49□□□□□ -2.01
NUP54-209ENST00000510569 A0A096LNJ9 63 aa2.49□□□□□ -2.01
NUP54-209ENST00000510569 IGHV3-64DA0A0J9YX35 117 aa2.49□□□□□ -2.01
NUP54-209ENST00000510569 J3QR89 54 aa2.49□□□□□ -2.01
NUP54-209ENST00000510569 ISLRO14498 428 aa2.49□□□□□ -2.01
NUP54-209ENST00000510569 CCL25O15444 150 aa2.49□□□□□ -2.01
NUP54-209ENST00000510569 COX7A2P2O60397 106 aa2.49□□□□□ -2.01
NUP54-209ENST00000510569 APOMO95445 188 aa2.49□□□□□ -2.01
NUP54-209ENST00000510569 NCR2O95944 276 aa2.49□□□□□ -2.01
NUP54-209ENST00000510569 IGLV3-19P01714 112 aa2.49□□□□□ -2.01
NUP54-209ENST00000510569 FABP3P05413 133 aa2.49□□□□□ -2.01
NUP54-209ENST00000510569 ADRA2AP08913 450 aa2.49□□□□□ -2.01
NUP54-209ENST00000510569 CSRP1P21291 193 aaKnown RBP2.49□□□□□ -2.01
NUP54-209ENST00000510569 GABRA3P34903 492 aa2.49□□□□□ -2.01
NUP54-209ENST00000510569 OPRM1P35372 400 aa2.49□□□□□ -2.01
NUP54-209ENST00000510569 PSMB3P49720 205 aa2.49□□□□□ -2.01
NUP54-209ENST00000510569 DEFA1P59665 94 aa2.49□□□□□ -2.01
NUP54-209ENST00000510569 ABCA11PQ4W5N1 156 aa2.49□□□□□ -2.01
NUP54-209ENST00000510569 PABPC1L2AQ5JQF8 200 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms