RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 TRBV7-1A0A0A6YYK4 115 aa5.4□□□□□ -1.54
TOPBP1-207ENST00000509162 NAP1L6A6NFF2 107 aa5.4□□□□□ -1.54
TOPBP1-207ENST00000509162 ZNF785A8K8V0 405 aa5.4□□□□□ -1.54
TOPBP1-207ENST00000509162 SCAF4O95104 1147 aaKnown RBP5.4□□□□□ -1.54
TOPBP1-207ENST00000509162 IFNA17P01571 189 aa5.4□□□□□ -1.54
TOPBP1-207ENST00000509162 APOHP02749 345 aaPredicted RBP5.4□□□□□ -1.54
TOPBP1-207ENST00000509162 TCRBP04435 133 aa5.4□□□□□ -1.54
TOPBP1-207ENST00000509162 CD7P09564 240 aa5.4□□□□□ -1.54
TOPBP1-207ENST00000509162 DEFA4P12838 97 aa5.4□□□□□ -1.54
TOPBP1-207ENST00000509162 BTF3P20290 206 aaKnown RBP5.4□□□□□ -1.54
TOPBP1-207ENST00000509162 DEFB114Q30KQ6 69 aa5.4□□□□□ -1.54
TOPBP1-207ENST00000509162 C2orf83Q53S99 150 aa5.4□□□□□ -1.54
TOPBP1-207ENST00000509162 GPHB5Q86YW7 130 aa5.4□□□□□ -1.54
TOPBP1-207ENST00000509162 UBAC2Q8NBM4 344 aa5.4□□□□□ -1.54
TOPBP1-207ENST00000509162 SLC24A4Q8NFF2 622 aa5.4□□□□□ -1.54
TOPBP1-207ENST00000509162 OR4D5Q8NGN0 318 aa5.4□□□□□ -1.54
TOPBP1-207ENST00000509162 RNASE11Q8TAA1 199 aaKnown RBP5.4□□□□□ -1.54
TOPBP1-207ENST00000509162 PINX1Q96BK5 328 aaKnown RBP5.4□□□□□ -1.54
TOPBP1-207ENST00000509162 RRNAD1Q96FB5 475 aaKnown RBP5.4□□□□□ -1.54
TOPBP1-207ENST00000509162 BSCL2Q96G97 398 aaPredicted RBP5.4□□□□□ -1.54
TOPBP1-207ENST00000509162 OR10C1Q96KK4 312 aa5.4□□□□□ -1.54
TOPBP1-207ENST00000509162 CXorf58Q96LI9 332 aa5.4□□□□□ -1.54
TOPBP1-207ENST00000509162 C7orf50Q9BRJ6 194 aaKnown RBP5.4□□□□□ -1.54
TOPBP1-207ENST00000509162 MAGT1Q9H0U3 335 aa5.4□□□□□ -1.54
TOPBP1-207ENST00000509162 NUDT15Q9NV35 164 aa5.4□□□□□ -1.54
TOPBP1-207ENST00000509162 FKBP11Q9NYL4 201 aa5.4□□□□□ -1.54
TOPBP1-207ENST00000509162 RCL1Q9Y2P8 373 aaKnown RBP5.4□□□□□ -1.54
TOPBP1-207ENST00000509162 IGHV3-49A0A0A0MS15 119 aa5.39□□□□□ -1.55
TOPBP1-207ENST00000509162 DUXBA0A1W2PPF3 345 aa5.39□□□□□ -1.55
TOPBP1-207ENST00000509162 PMS2P5A8MQ11 134 aa5.39□□□□□ -1.55
TOPBP1-207ENST00000509162 NPIPB6E9PJ23 425 aa5.39□□□□□ -1.55
TOPBP1-207ENST00000509162 H3BP45 60 aa5.39□□□□□ -1.55
TOPBP1-207ENST00000509162 IGLC1P0CG04 106 aa5.39□□□□□ -1.55
TOPBP1-207ENST00000509162 NPY1RP25929 384 aa5.39□□□□□ -1.55
TOPBP1-207ENST00000509162 INSL3P51460 131 aa5.39□□□□□ -1.55
TOPBP1-207ENST00000509162 PAX9P55771 341 aa5.39□□□□□ -1.55
TOPBP1-207ENST00000509162 TIGITQ495A1 244 aa5.39□□□□□ -1.55
TOPBP1-207ENST00000509162 PRSS54Q6PEW0 395 aa5.39□□□□□ -1.55
TOPBP1-207ENST00000509162 GSG1LQ6UXU4 331 aa5.39□□□□□ -1.55
TOPBP1-207ENST00000509162 DTD1Q8TEA8 209 aa5.39□□□□□ -1.55
TOPBP1-207ENST00000509162 MITD1Q8WV92 249 aa5.39□□□□□ -1.55
TOPBP1-207ENST00000509162 GPR61Q9BZJ8 451 aa5.39□□□□□ -1.55
TOPBP1-207ENST00000509162 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.39□□□□□ -1.55
TOPBP1-207ENST00000509162 SLC45A2Q9UMX9 530 aa5.39□□□□□ -1.55
TOPBP1-207ENST00000509162 IGHV3OR16-13A0A075B7E8 117 aa5.38□□□□□ -1.55
TOPBP1-207ENST00000509162 IGHV3-74A0A0B4J1X5 117 aa5.38□□□□□ -1.55
TOPBP1-207ENST00000509162 CEBPZOSA8MTT3 80 aa5.38□□□□□ -1.55
TOPBP1-207ENST00000509162 TNFRSF6BO95407 300 aa5.38□□□□□ -1.55
TOPBP1-207ENST00000509162 DHFRP00374 187 aa5.38□□□□□ -1.55
TOPBP1-207ENST00000509162 SLC25A6P12236 298 aa5.38□□□□□ -1.55
TOPBP1-207ENST00000509162 CBLN1P23435 193 aa5.38□□□□□ -1.55
TOPBP1-207ENST00000509162 RND2P52198 227 aa5.38□□□□□ -1.55
TOPBP1-207ENST00000509162 PTTG1IPP53801 180 aa5.38□□□□□ -1.55
TOPBP1-207ENST00000509162 POLR2GP62487 172 aaKnown RBP eCLIP5.38□□□□□ -1.55
TOPBP1-207ENST00000509162 SRPXP78539 464 aa5.38□□□□□ -1.55
TOPBP1-207ENST00000509162 ARL16Q0P5N6 197 aa5.38□□□□□ -1.55
TOPBP1-207ENST00000509162 IL15RAQ13261 267 aa5.38□□□□□ -1.55
TOPBP1-207ENST00000509162 ZNF846Q147U1 533 aa5.38□□□□□ -1.55
TOPBP1-207ENST00000509162 ODF3L2Q3SX64 289 aa5.38□□□□□ -1.55
TOPBP1-207ENST00000509162 Q56UQ5 140 aa5.38□□□□□ -1.55
TOPBP1-207ENST00000509162 PLET1Q6UQ28 207 aa5.38□□□□□ -1.55
TOPBP1-207ENST00000509162 TOMM20LQ6UXN7 152 aa5.38□□□□□ -1.55
TOPBP1-207ENST00000509162 SLC16A13Q7RTY0 426 aa5.38□□□□□ -1.55
TOPBP1-207ENST00000509162 NRARPQ7Z6K4 114 aa5.38□□□□□ -1.55
TOPBP1-207ENST00000509162 FAM24BQ8N5W8 94 aa5.38□□□□□ -1.55
TOPBP1-207ENST00000509162 UXS1Q8NBZ7 420 aa5.38□□□□□ -1.55
TOPBP1-207ENST00000509162 SCGB3A2Q96PL1 93 aa5.38□□□□□ -1.55
TOPBP1-207ENST00000509162 ATP6V0BQ99437 205 aa5.38□□□□□ -1.55
TOPBP1-207ENST00000509162 ASCL2Q99929 193 aa5.38□□□□□ -1.55
TOPBP1-207ENST00000509162 B9D2Q9BPU9 175 aa5.38□□□□□ -1.55
TOPBP1-207ENST00000509162 BATF3Q9NR55 127 aa5.38□□□□□ -1.55
TOPBP1-207ENST00000509162 DNAH10Q8IVF4 4471 aa5.37□□□□□ -1.55
TOPBP1-207ENST00000509162 NBEAL2Q6ZNJ1 2754 aa5.37□□□□□ -1.55
TOPBP1-207ENST00000509162 IGHV3-66A0A0C4DH42 116 aa5.37□□□□□ -1.55
TOPBP1-207ENST00000509162 ZNF320A2RRD8 509 aa5.37□□□□□ -1.55
TOPBP1-207ENST00000509162 NDUFA4O00483 81 aa5.37□□□□□ -1.55
TOPBP1-207ENST00000509162 CHEK1O14757 476 aa5.37□□□□□ -1.55
TOPBP1-207ENST00000509162 CLN5O75503 358 aa5.37□□□□□ -1.55
TOPBP1-207ENST00000509162 ATG12O94817 140 aa5.37□□□□□ -1.55
TOPBP1-207ENST00000509162 FRMD6-AS1P0C7T7 363 aa5.37□□□□□ -1.55
TOPBP1-207ENST00000509162 IGHV4-30-4P0DP06 118 aa5.37□□□□□ -1.55
TOPBP1-207ENST00000509162 ANXA3P12429 323 aa5.37□□□□□ -1.55
TOPBP1-207ENST00000509162 OPRK1P41145 380 aa5.37□□□□□ -1.55
TOPBP1-207ENST00000509162 HTR2BP41595 481 aa5.37□□□□□ -1.55
TOPBP1-207ENST00000509162 MFAP4P55083 255 aa5.37□□□□□ -1.55
TOPBP1-207ENST00000509162 ERHP84090 104 aaKnown RBP5.37□□□□□ -1.55
TOPBP1-207ENST00000509162 USF2Q15853 346 aaPredicted RBP5.37□□□□□ -1.55
TOPBP1-207ENST00000509162 FAM90A2PQ658T7 463 aa5.37□□□□□ -1.55
TOPBP1-207ENST00000509162 LINC00322Q6ZN03 302 aaPredicted RBP5.37□□□□□ -1.55
TOPBP1-207ENST00000509162 TMEM182Q6ZP80 229 aaPredicted RBP5.37□□□□□ -1.55
TOPBP1-207ENST00000509162 SBSPONQ8IVN8 264 aa5.37□□□□□ -1.55
TOPBP1-207ENST00000509162 ZBTB8BQ8NAP8 495 aaPredicted RBP5.37□□□□□ -1.55
TOPBP1-207ENST00000509162 OR1L6Q8NGR2 347 aa5.37□□□□□ -1.55
TOPBP1-207ENST00000509162 OR4X1Q8NH49 305 aa5.37□□□□□ -1.55
TOPBP1-207ENST00000509162 OR1S1Q8NH92 325 aa5.37□□□□□ -1.55
TOPBP1-207ENST00000509162 ZNF431Q8TF32 576 aaPredicted RBP5.37□□□□□ -1.55
TOPBP1-207ENST00000509162 S100ZQ8WXG8 99 aa5.37□□□□□ -1.55
TOPBP1-207ENST00000509162 ST8SIA2Q92186 375 aa5.37□□□□□ -1.55
TOPBP1-207ENST00000509162 C17orf77Q96MU5 243 aa5.37□□□□□ -1.55
TOPBP1-207ENST00000509162 RNF2Q99496 336 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms