RNA–Protein interactions for RNA: ENST00000509043.1

HTT-205, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 380 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-205ENST00000509043 TMEM68Q96MH6 324 aa7.35□□□□□ -1.23
HTT-205ENST00000509043 CCL19Q99731 98 aa7.35□□□□□ -1.23
HTT-205ENST00000509043 RASL11BQ9BPW5 248 aa7.35□□□□□ -1.23
HTT-205ENST00000509043 BPESC1Q9GZL8 116 aa7.35□□□□□ -1.23
HTT-205ENST00000509043 WNT10AQ9GZT5 417 aa7.35□□□□□ -1.23
HTT-205ENST00000509043 ZNF355PQ9NSJ1 428 aa7.35□□□□□ -1.23
HTT-205ENST00000509043 TMEM14CQ9P0S9 112 aa7.35□□□□□ -1.23
HTT-205ENST00000509043 KLK9Q9UKQ9 250 aa7.35□□□□□ -1.23
HTT-205ENST00000509043 URGCP-MRPS24S4R325 110 aa7.35□□□□□ -1.23
HTT-205ENST00000509043 ADGRG4Q8IZF6 3080 aa7.34□□□□□ -1.23
HTT-205ENST00000509043 FCN1O00602 326 aa7.34□□□□□ -1.23
HTT-205ENST00000509043 IGHV4-39P01824 125 aa7.34□□□□□ -1.23
HTT-205ENST00000509043 HLA-DRB1P01911 266 aa7.34□□□□□ -1.23
HTT-205ENST00000509043 IGLC1P0CG04 106 aa7.34□□□□□ -1.23
HTT-205ENST00000509043 PAX1P15863 534 aa7.34□□□□□ -1.23
HTT-205ENST00000509043 TMEM11P17152 192 aa7.34□□□□□ -1.23
HTT-205ENST00000509043 RPL35P42766 123 aaKnown RBP7.34□□□□□ -1.23
HTT-205ENST00000509043 GNG4P50150 75 aa7.34□□□□□ -1.23
HTT-205ENST00000509043 YPEL3P61236 119 aaPredicted RBP7.34□□□□□ -1.23
HTT-205ENST00000509043 ZNF90Q03938 601 aa7.34□□□□□ -1.23
HTT-205ENST00000509043 TIGITQ495A1 244 aa7.34□□□□□ -1.23
HTT-205ENST00000509043 CLEC2AQ6UVW9 174 aa7.34□□□□□ -1.23
HTT-205ENST00000509043 PATE2Q6UY27 113 aa7.34□□□□□ -1.23
HTT-205ENST00000509043 LINC00305Q7Z4B0 112 aa7.34□□□□□ -1.23
HTT-205ENST00000509043 OR10G8Q8NGN5 311 aa7.34□□□□□ -1.23
HTT-205ENST00000509043 C2CD4CQ8TF44 421 aa7.34□□□□□ -1.23
HTT-205ENST00000509043 FAM168AQ92567 244 aa7.34□□□□□ -1.23
HTT-205ENST00000509043 TBX15Q96SF7 602 aa7.34□□□□□ -1.23
HTT-205ENST00000509043 TXN2Q99757 166 aa7.34□□□□□ -1.23
HTT-205ENST00000509043 CDC42EP3Q9UKI2 254 aa7.34□□□□□ -1.23
HTT-205ENST00000509043 HIGD1AQ9Y241 93 aa7.34□□□□□ -1.23
HTT-205ENST00000509043 ITPR1Q14643 2758 aa7.34□□□□□ -1.23
HTT-205ENST00000509043 NBEAQ8NFP9 2946 aa7.34□□□□□ -1.24
HTT-205ENST00000509043 ATRXP46100 2492 aa7.34□□□□□ -1.24
HTT-205ENST00000509043 TNCP24821 2201 aa7.33□□□□□ -1.24
HTT-205ENST00000509043 TRBV20OR9-2A0A075B6H5 130 aa7.33□□□□□ -1.24
HTT-205ENST00000509043 VWC2LB2RUY7 222 aa7.33□□□□□ -1.24
HTT-205ENST00000509043 GGTLC3B5MD39 225 aa7.33□□□□□ -1.24
HTT-205ENST00000509043 K7EIM0 57 aa7.33□□□□□ -1.24
HTT-205ENST00000509043 NPFFO15130 113 aa7.33□□□□□ -1.24
HTT-205ENST00000509043 NDUFS7O75251 213 aa7.33□□□□□ -1.24
HTT-205ENST00000509043 RD3LP0DJH9 198 aa7.33□□□□□ -1.24
HTT-205ENST00000509043 FCGR2BP31994 310 aaPredicted RBP7.33□□□□□ -1.24
HTT-205ENST00000509043 CNN1P51911 297 aaKnown RBP7.33□□□□□ -1.24
HTT-205ENST00000509043 SNRPEP62304 92 aaKnown RBP7.33□□□□□ -1.24
HTT-205ENST00000509043 CX3CL1P78423 397 aa7.33□□□□□ -1.24
HTT-205ENST00000509043 PRB3Q04118 309 aaPredicted RBP7.33□□□□□ -1.24
HTT-205ENST00000509043 PAX8Q06710 450 aa7.33□□□□□ -1.24
HTT-205ENST00000509043 COX19Q49B96 90 aa7.33□□□□□ -1.24
HTT-205ENST00000509043 TEX38Q6PEX7 206 aa7.33□□□□□ -1.24
HTT-205ENST00000509043 OR1B1Q8NGR6 318 aa7.33□□□□□ -1.24
HTT-205ENST00000509043 C10orf105Q8TEF2 133 aa7.33□□□□□ -1.24
HTT-205ENST00000509043 FXYD5Q96DB9 178 aa7.33□□□□□ -1.24
HTT-205ENST00000509043 RBM14Q96PK6 669 aaKnown RBP7.33□□□□□ -1.24
HTT-205ENST00000509043 CHRDL1Q9BU40 450 aa7.33□□□□□ -1.24
HTT-205ENST00000509043 DERL1Q9BUN8 251 aa7.33□□□□□ -1.24
HTT-205ENST00000509043 GAR1Q9NY12 217 aaKnown RBP7.33□□□□□ -1.24
HTT-205ENST00000509043 MRPL36Q9P0J6 103 aaKnown RBP7.33□□□□□ -1.24
HTT-205ENST00000509043 CHD8Q9HCK8 2581 aa7.32□□□□□ -1.24
HTT-205ENST00000509043 IGLV11-55A0A075B6I3 123 aa7.32□□□□□ -1.24
HTT-205ENST00000509043 NCBP2LA6PVI3 153 aaKnown RBP7.32□□□□□ -1.24
HTT-205ENST00000509043 ISLRO14498 428 aa7.32□□□□□ -1.24
HTT-205ENST00000509043 KALRNO60229 2985 aa7.32□□□□□ -1.24
HTT-205ENST00000509043 TOMM40O96008 361 aa7.32□□□□□ -1.24
HTT-205ENST00000509043 SMIM6P0DI80 62 aa7.32□□□□□ -1.24
HTT-205ENST00000509043 ORM2P19652 201 aa7.32□□□□□ -1.24
HTT-205ENST00000509043 HOXA5P20719 270 aa7.32□□□□□ -1.24
HTT-205ENST00000509043 GATA3P23771 443 aa7.32□□□□□ -1.24
HTT-205ENST00000509043 CRYBB3P26998 211 aa7.32□□□□□ -1.24
HTT-205ENST00000509043 MYCNOSP40205 109 aa7.32□□□□□ -1.24
HTT-205ENST00000509043 MFAP4P55083 255 aa7.32□□□□□ -1.24
HTT-205ENST00000509043 SUMO1P63165 101 aaKnown RBP7.32□□□□□ -1.24
HTT-205ENST00000509043 FABP9Q0Z7S8 132 aa7.32□□□□□ -1.24
HTT-205ENST00000509043 LINC00518Q8N0U6 118 aa7.32□□□□□ -1.24
HTT-205ENST00000509043 OCC1Q8TAD7 63 aa7.32□□□□□ -1.24
HTT-205ENST00000509043 VN1R17PQ8TDU5 208 aa7.32□□□□□ -1.24
HTT-205ENST00000509043 ATP6V0BQ99437 205 aa7.32□□□□□ -1.24
HTT-205ENST00000509043 OSTCQ9NRP0 149 aa7.32□□□□□ -1.24
HTT-205ENST00000509043 MRPL27Q9P0M9 148 aaKnown RBP7.32□□□□□ -1.24
HTT-205ENST00000509043 DMRT1Q9Y5R6 373 aa7.32□□□□□ -1.24
HTT-205ENST00000509043 HIVEP3Q5T1R4 2406 aa7.32□□□□□ -1.24
HTT-205ENST00000509043 ABCA4P78363 2273 aa7.31□□□□□ -1.24
HTT-205ENST00000509043 A0A1W2PRD5 423 aa7.31□□□□□ -1.24
HTT-205ENST00000509043 A0A1W2PRF3 423 aa7.31□□□□□ -1.24
HTT-205ENST00000509043 A0A1W2PRM7 423 aa7.31□□□□□ -1.24
HTT-205ENST00000509043 PEX7O00628 323 aa7.31□□□□□ -1.24
HTT-205ENST00000509043 HIST1H2BKO60814 126 aa7.31□□□□□ -1.24
HTT-205ENST00000509043 GCGP01275 180 aa7.31□□□□□ -1.24
HTT-205ENST00000509043 IGKV1-17P01599 117 aa7.31□□□□□ -1.24
HTT-205ENST00000509043 TRGC2P03986 189 aa7.31□□□□□ -1.24
HTT-205ENST00000509043 HIST1H2BJP06899 126 aa7.31□□□□□ -1.24
HTT-205ENST00000509043 NBEAP1P0C6P0 100 aa7.31□□□□□ -1.24
HTT-205ENST00000509043 PSG1P11464 419 aa7.31□□□□□ -1.24
HTT-205ENST00000509043 GP9P14770 177 aa7.31□□□□□ -1.24
HTT-205ENST00000509043 HIST1H2BOP23527 126 aa7.31□□□□□ -1.24
HTT-205ENST00000509043 HIST1H2BBP33778 126 aa7.31□□□□□ -1.24
HTT-205ENST00000509043 SAA4P35542 130 aa7.31□□□□□ -1.24
HTT-205ENST00000509043 CDX1P47902 265 aaPredicted RBP7.31□□□□□ -1.24
HTT-205ENST00000509043 AKR1D1P51857 326 aa7.31□□□□□ -1.24
HTT-205ENST00000509043 HIST1H2BDP58876 126 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms