RNA–Protein interactions for RNA: ENST00000508841.1

GYPB-210, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 5

Gene GYPB, Length 610 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-210ENST00000508841 ROBO3Q96MS0 1386 aa1.41□□□□□ -2.18
GYPB-210ENST00000508841 SBF1O95248 1867 aa1.4□□□□□ -2.19
GYPB-210ENST00000508841 OR4E1P0C645 316 aa1.4□□□□□ -2.19
GYPB-210ENST00000508841 SSR2P43308 183 aa1.4□□□□□ -2.19
GYPB-210ENST00000508841 C12orf74Q32Q52 190 aa1.4□□□□□ -2.19
GYPB-210ENST00000508841 MNS1Q8NEH6 495 aa1.4□□□□□ -2.19
GYPB-210ENST00000508841 OR10J5Q8NHC4 309 aa1.4□□□□□ -2.19
GYPB-210ENST00000508841 ZNF418Q8TF45 676 aaPredicted RBP1.4□□□□□ -2.19
GYPB-210ENST00000508841 PLXND1Q9Y4D7 1925 aa1.4□□□□□ -2.19
GYPB-210ENST00000508841 HECW2Q9P2P5 1572 aa1.39□□□□□ -2.19
GYPB-210ENST00000508841 A0A087X0T9 212 aa1.39□□□□□ -2.19
GYPB-210ENST00000508841 SMIM9A6NGZ8 99 aa1.39□□□□□ -2.19
GYPB-210ENST00000508841 ZNF682O95780 498 aa1.39□□□□□ -2.19
GYPB-210ENST00000508841 TCRBP04435 133 aa1.39□□□□□ -2.19
GYPB-210ENST00000508841 SERPINE1P05121 402 aa1.39□□□□□ -2.19
GYPB-210ENST00000508841 C8GP07360 202 aa1.39□□□□□ -2.19
GYPB-210ENST00000508841 MGST1P10620 155 aaKnown RBP1.39□□□□□ -2.19
GYPB-210ENST00000508841 ZNF93P35789 620 aaPredicted RBP1.39□□□□□ -2.19
GYPB-210ENST00000508841 CDKN2CP42773 168 aa1.39□□□□□ -2.19
GYPB-210ENST00000508841 DEFA1P59665 94 aa1.39□□□□□ -2.19
GYPB-210ENST00000508841 LSM6P62312 80 aaKnown RBP1.39□□□□□ -2.19
GYPB-210ENST00000508841 RANP62826 216 aaKnown RBP1.39□□□□□ -2.19
GYPB-210ENST00000508841 SRSF6Q13247 344 aaKnown RBP1.39□□□□□ -2.19
GYPB-210ENST00000508841 C12orf45Q8N5I9 185 aaPredicted RBP1.39□□□□□ -2.19
GYPB-210ENST00000508841 OR51V1Q9H2C8 321 aa1.39□□□□□ -2.19
GYPB-210ENST00000508841 RASL12Q9NYN1 266 aa1.39□□□□□ -2.19
GYPB-210ENST00000508841 NCOA6Q14686 2063 aaPredicted RBP1.38□□□□□ -2.19
GYPB-210ENST00000508841 hCG_1818297A0A087WSY0 165 aa1.38□□□□□ -2.19
GYPB-210ENST00000508841 TRAV12-1A0A0B4J245 112 aa1.38□□□□□ -2.19
GYPB-210ENST00000508841 A8MT66 165 aa1.38□□□□□ -2.19
GYPB-210ENST00000508841 M0R2N4 97 aa1.38□□□□□ -2.19
GYPB-210ENST00000508841 PDE6DO43924 150 aa1.38□□□□□ -2.19
GYPB-210ENST00000508841 ANP32AP39687 249 aaKnown RBP1.38□□□□□ -2.19
GYPB-210ENST00000508841 SPA17Q15506 151 aa1.38□□□□□ -2.19
GYPB-210ENST00000508841 Q8N814 137 aa1.38□□□□□ -2.19
GYPB-210ENST00000508841 TEX47Q8TBZ9 253 aa1.38□□□□□ -2.19
GYPB-210ENST00000508841 ACER3Q9NUN7 267 aa1.38□□□□□ -2.19
GYPB-210ENST00000508841 TVP23BQ9NYZ1 205 aa1.38□□□□□ -2.19
GYPB-210ENST00000508841 SLC22A13Q9Y226 551 aa1.38□□□□□ -2.19
GYPB-210ENST00000508841 HAND1O96004 215 aa1.37□□□□□ -2.19
GYPB-210ENST00000508841 RNASE10Q5GAN6 216 aaKnown RBP1.37□□□□□ -2.19
GYPB-210ENST00000508841 GLTPQ9NZD2 209 aa1.37□□□□□ -2.19
GYPB-210ENST00000508841 PRELID3BQ9Y3B1 194 aa1.37□□□□□ -2.19
GYPB-210ENST00000508841 PIK3C2GO75747 1445 aa1.37□□□□□ -2.19
GYPB-210ENST00000508841 MYO3BQ8WXR4 1341 aa1.37□□□□□ -2.19
GYPB-210ENST00000508841 CEP192Q8TEP8 1941 aa1.36□□□□□ -2.19
GYPB-210ENST00000508841 TNRC6AQ8NDV7 1962 aaKnown RBP1.36□□□□□ -2.19
GYPB-210ENST00000508841 LYZL6O75951 148 aa1.36□□□□□ -2.19
GYPB-210ENST00000508841 CCL7P80098 99 aa1.36□□□□□ -2.19
GYPB-210ENST00000508841 TSNQ15631 228 aaKnown RBP1.36□□□□□ -2.19
GYPB-210ENST00000508841 Q6Q795 121 aa1.36□□□□□ -2.19
GYPB-210ENST00000508841 OR52R1Q8NGF1 315 aa1.36□□□□□ -2.19
GYPB-210ENST00000508841 HIST1H2BLQ99880 126 aa1.36□□□□□ -2.19
GYPB-210ENST00000508841 HECW1Q76N89 1606 aa1.36□□□□□ -2.19
GYPB-210ENST00000508841 TAF1LQ8IZX4 1826 aa1.36□□□□□ -2.19
GYPB-210ENST00000508841 MED1Q15648 1581 aaPredicted RBP1.35□□□□□ -2.19
GYPB-210ENST00000508841 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.35□□□□□ -2.19
GYPB-210ENST00000508841 CLDN25C9JDP6 229 aa1.35□□□□□ -2.19
GYPB-210ENST00000508841 AKIRIN2Q53H80 203 aa1.35□□□□□ -2.19
GYPB-210ENST00000508841 LCA10Q71F78 164 aa1.35□□□□□ -2.19
GYPB-210ENST00000508841 OR51A2Q8NGJ7 313 aa1.35□□□□□ -2.19
GYPB-210ENST00000508841 OR8D4Q8NGM9 314 aa1.35□□□□□ -2.19
GYPB-210ENST00000508841 FAM172AQ8WUF8 416 aa1.35□□□□□ -2.19
GYPB-210ENST00000508841 FBXO5Q9UKT4 447 aa1.35□□□□□ -2.19
GYPB-210ENST00000508841 ZFP30Q9Y2G7 519 aa1.35□□□□□ -2.19
GYPB-210ENST00000508841 TRBV6-8A0A0A6YYG3 113 aa1.34□□□□□ -2.19
GYPB-210ENST00000508841 GDF5OSQ5U4N7 250 aa1.34□□□□□ -2.19
GYPB-210ENST00000508841 BTF3L4Q96K17 158 aa1.34□□□□□ -2.19
GYPB-210ENST00000508841 UCK1Q9HA47 277 aa1.34□□□□□ -2.19
GYPB-210ENST00000508841 UQCC1Q9NVA1 299 aa1.34□□□□□ -2.19
GYPB-210ENST00000508841 C14orf105Q9NVL8 296 aa1.34□□□□□ -2.19
GYPB-210ENST00000508841 ADGRB2O60241 1585 aa1.34□□□□□ -2.2
GYPB-210ENST00000508841 TMEM114B3SHH9 223 aa1.33□□□□□ -2.2
GYPB-210ENST00000508841 INE1O15225 51 aa1.33□□□□□ -2.2
GYPB-210ENST00000508841 C1orf137Q5JT78 98 aa1.33□□□□□ -2.2
GYPB-210ENST00000508841 BRMS1LQ5PSV4 323 aa1.33□□□□□ -2.2
GYPB-210ENST00000508841 LYRM7Q5U5X0 104 aa1.33□□□□□ -2.2
GYPB-210ENST00000508841 C3orf56Q8N813 242 aa1.33□□□□□ -2.2
GYPB-210ENST00000508841 OR2T10Q8NGZ9 312 aa1.33□□□□□ -2.2
GYPB-210ENST00000508841 OBSCN-AS1Q96MR7 158 aa1.33□□□□□ -2.2
GYPB-210ENST00000508841 C14orf132Q9NPU4 83 aa1.33□□□□□ -2.2
GYPB-210ENST00000508841 IDI2-AS1Q9NZ38 188 aa1.33□□□□□ -2.2
GYPB-210ENST00000508841 V9GYY5 206 aaPredicted RBP1.33□□□□□ -2.2
GYPB-210ENST00000508841 SCN3AQ9NY46 2000 aa1.32□□□□□ -2.2
GYPB-210ENST00000508841 CYB5BO43169 146 aa1.32□□□□□ -2.2
GYPB-210ENST00000508841 SMIM17P0DL12 118 aa1.32□□□□□ -2.2
GYPB-210ENST00000508841 MYL6P60660 151 aa1.32□□□□□ -2.2
GYPB-210ENST00000508841 RHOBP62745 196 aa1.32□□□□□ -2.2
GYPB-210ENST00000508841 PRB3Q04118 309 aaPredicted RBP1.32□□□□□ -2.2
GYPB-210ENST00000508841 ESRGQ1W209 222 aa1.32□□□□□ -2.2
GYPB-210ENST00000508841 OR52L1Q8NGH7 329 aa1.32□□□□□ -2.2
GYPB-210ENST00000508841 SLC25A40Q8TBP6 338 aa1.32□□□□□ -2.2
GYPB-210ENST00000508841 KIFC1Q9BW19 673 aa1.32□□□□□ -2.2
GYPB-210ENST00000508841 RNASE7Q9H1E1 156 aaKnown RBP1.32□□□□□ -2.2
GYPB-210ENST00000508841 LAMB4A4D0S4 1761 aa1.31□□□□□ -2.2
GYPB-210ENST00000508841 SCN10AQ9Y5Y9 1956 aa1.31□□□□□ -2.2
GYPB-210ENST00000508841 OR7C1O76099 320 aaPredicted RBP1.31□□□□□ -2.2
GYPB-210ENST00000508841 CNBPP62633 177 aaKnown RBP1.31□□□□□ -2.2
GYPB-210ENST00000508841 LINC00301Q8NCQ3 95 aa1.31□□□□□ -2.2
GYPB-210ENST00000508841 C6orf62Q9GZU0 229 aaPredicted RBP1.31□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms