RNA–Protein interactions for RNA: ENST00000508343.1

TRIO-211, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 776 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-211ENST00000508343 WFDC10AQ9H1F0 79 aa11.27□□□□□ -0.61
TRIO-211ENST00000508343 SYNGR2O43760 224 aa11.26□□□□□ -0.61
TRIO-211ENST00000508343 IFNA21P01568 189 aa11.26□□□□□ -0.61
TRIO-211ENST00000508343 TCRBP04435 133 aa11.26□□□□□ -0.61
TRIO-211ENST00000508343 IGLC1P0CG04 106 aa11.26□□□□□ -0.61
TRIO-211ENST00000508343 IAPPP10997 89 aa11.26□□□□□ -0.61
TRIO-211ENST00000508343 OR10J1P30954 320 aa11.26□□□□□ -0.61
TRIO-211ENST00000508343 GPX4P36969 197 aaPredicted RBP11.26□□□□□ -0.61
TRIO-211ENST00000508343 Q8WTZ3 238 aa11.26□□□□□ -0.61
TRIO-211ENST00000508343 NPIPB3Q92617 1050 aa11.26□□□□□ -0.61
TRIO-211ENST00000508343 RCHY1Q96PM5 261 aa11.26□□□□□ -0.61
TRIO-211ENST00000508343 CIB3Q96Q77 187 aaPredicted RBP11.26□□□□□ -0.61
TRIO-211ENST00000508343 MAGT1Q9H0U3 335 aa11.26□□□□□ -0.61
TRIO-211ENST00000508343 C20orf85Q9H1P6 137 aa11.26□□□□□ -0.61
TRIO-211ENST00000508343 SRD5A3Q9H8P0 318 aa11.26□□□□□ -0.61
TRIO-211ENST00000508343 PTTG2Q9NZH5 202 aa11.26□□□□□ -0.61
TRIO-211ENST00000508343 STAB2Q8WWQ8 2551 aa11.26□□□□□ -0.61
TRIO-211ENST00000508343 IGHV3OR16-13A0A075B7E8 117 aa11.25□□□□□ -0.61
TRIO-211ENST00000508343 IGHV3-74A0A0B4J1X5 117 aa11.25□□□□□ -0.61
TRIO-211ENST00000508343 OR4C46A6NHA9 309 aa11.25□□□□□ -0.61
TRIO-211ENST00000508343 CD5P06127 495 aa11.25□□□□□ -0.61
TRIO-211ENST00000508343 NPPCP23582 126 aa11.25□□□□□ -0.61
TRIO-211ENST00000508343 YPEL3P61236 119 aaPredicted RBP11.25□□□□□ -0.61
TRIO-211ENST00000508343 RAB11AP62491 216 aa11.25□□□□□ -0.61
TRIO-211ENST00000508343 RPP30P78346 268 aaKnown RBP11.25□□□□□ -0.61
TRIO-211ENST00000508343 ACY3Q96HD9 319 aa11.25□□□□□ -0.61
TRIO-211ENST00000508343 VSIRQ9H7M9 311 aa11.25□□□□□ -0.61
TRIO-211ENST00000508343 BATF3Q9NR55 127 aa11.25□□□□□ -0.61
TRIO-211ENST00000508343 TENM3Q9P273 2699 aa11.25□□□□□ -0.61
TRIO-211ENST00000508343 RBMY1BA6NDE4 496 aaKnown RBP11.24□□□□□ -0.61
TRIO-211ENST00000508343 RBMY1EA6NEQ0 496 aaKnown RBP11.24□□□□□ -0.61
TRIO-211ENST00000508343 MPTX1A8MV57 137 aa11.24□□□□□ -0.61
TRIO-211ENST00000508343 APOHP02749 345 aaPredicted RBP11.24□□□□□ -0.61
TRIO-211ENST00000508343 RBMY1DP0C7P1 496 aaKnown RBP11.24□□□□□ -0.61
TRIO-211ENST00000508343 ID3Q02535 119 aa11.24□□□□□ -0.61
TRIO-211ENST00000508343 ZNF846Q147U1 533 aa11.24□□□□□ -0.61
TRIO-211ENST00000508343 FAM90A2PQ658T7 463 aa11.24□□□□□ -0.61
TRIO-211ENST00000508343 LILRB2Q8N423 598 aa11.24□□□□□ -0.61
TRIO-211ENST00000508343 MITD1Q8WV92 249 aa11.24□□□□□ -0.61
TRIO-211ENST00000508343 ST8SIA2Q92186 375 aa11.24□□□□□ -0.61
TRIO-211ENST00000508343 METTL26Q96S19 204 aa11.24□□□□□ -0.61
TRIO-211ENST00000508343 WDR12Q9GZL7 423 aaKnown RBP11.24□□□□□ -0.61
TRIO-211ENST00000508343 TMEM231Q9H6L2 316 aa11.24□□□□□ -0.61
TRIO-211ENST00000508343 NBEAL2Q6ZNJ1 2754 aa11.23□□□□□ -0.61
TRIO-211ENST00000508343 TRAV6A0A075B6T7 132 aa11.23□□□□□ -0.61
TRIO-211ENST00000508343 FAM240BA0A1B0GVZ2 78 aa11.23□□□□□ -0.61
TRIO-211ENST00000508343 A0A1W2PS18 150 aa11.23□□□□□ -0.61
TRIO-211ENST00000508343 WRBO00258 174 aa11.23□□□□□ -0.61
TRIO-211ENST00000508343 CRYBB3P26998 211 aa11.23□□□□□ -0.61
TRIO-211ENST00000508343 PAFAH1B2P68402 229 aa11.23□□□□□ -0.61
TRIO-211ENST00000508343 GAMTQ14353 236 aa11.23□□□□□ -0.61
TRIO-211ENST00000508343 MZT2BQ6NZ67 158 aa11.23□□□□□ -0.61
TRIO-211ENST00000508343 TCF24Q7RTU0 167 aa11.23□□□□□ -0.61
TRIO-211ENST00000508343 OR4D5Q8NGN0 318 aa11.23□□□□□ -0.61
TRIO-211ENST00000508343 SPATA25Q9BR10 227 aa11.23□□□□□ -0.61
TRIO-211ENST00000508343 NUDT15Q9NV35 164 aa11.23□□□□□ -0.61
TRIO-211ENST00000508343 PAIP2BQ9ULR5 123 aaKnown RBP11.23□□□□□ -0.61
TRIO-211ENST00000508343 IGKV3-7A0A075B6H7 116 aa11.22□□□□□ -0.61
TRIO-211ENST00000508343 IGHV3-66A0A0C4DH42 116 aa11.22□□□□□ -0.61
TRIO-211ENST00000508343 DFFBO76075 338 aa11.22□□□□□ -0.61
TRIO-211ENST00000508343 H2AFB2P0C5Z0 115 aa11.22□□□□□ -0.61
TRIO-211ENST00000508343 RD3LP0DJH9 198 aa11.22□□□□□ -0.61
TRIO-211ENST00000508343 NKX2-1P43699 371 aaPredicted RBP11.22□□□□□ -0.61
TRIO-211ENST00000508343 CMC4P56277 68 aaPredicted RBP11.22□□□□□ -0.61
TRIO-211ENST00000508343 ASAH1Q13510 395 aa11.22□□□□□ -0.61
TRIO-211ENST00000508343 NARS2Q96I59 477 aaKnown RBP11.22□□□□□ -0.61
TRIO-211ENST00000508343 SLC35E1Q96K37 410 aa11.22□□□□□ -0.61
TRIO-211ENST00000508343 FAM110AQ9BQ89 295 aa11.22□□□□□ -0.61
TRIO-211ENST00000508343 UBQLN2Q9UHD9 624 aa11.22□□□□□ -0.61
TRIO-211ENST00000508343 TBC1D24Q9ULP9 559 aa11.22□□□□□ -0.61
TRIO-211ENST00000508343 TOMM40O96008 361 aa11.21□□□□□ -0.61
TRIO-211ENST00000508343 TFPI2P48307 235 aa11.21□□□□□ -0.61
TRIO-211ENST00000508343 POLR2GP62487 172 aaKnown RBP eCLIP11.21□□□□□ -0.61
TRIO-211ENST00000508343 IAH1Q2TAA2 248 aaPredicted RBP11.21□□□□□ -0.61
TRIO-211ENST00000508343 ODF3L2Q3SX64 289 aa11.21□□□□□ -0.61
TRIO-211ENST00000508343 SPANXN5Q5MJ07 72 aa11.21□□□□□ -0.61
TRIO-211ENST00000508343 GBGT1Q8N5D6 347 aa11.21□□□□□ -0.61
TRIO-211ENST00000508343 CITED4Q96RK1 184 aa11.21□□□□□ -0.61
TRIO-211ENST00000508343 STRAPQ9Y3F4 350 aaKnown RBP11.21□□□□□ -0.61
TRIO-211ENST00000508343 DNAH7Q8WXX0 4024 aa11.2□□□□□ -0.62
TRIO-211ENST00000508343 LOC102724200A0A096LPH7 203 aaPredicted RBP11.2□□□□□ -0.62
TRIO-211ENST00000508343 ZFP92A6NM28 416 aa11.2□□□□□ -0.62
TRIO-211ENST00000508343 UPK1BO75841 260 aa11.2□□□□□ -0.62
TRIO-211ENST00000508343 IL4P05112 153 aa11.2□□□□□ -0.62
TRIO-211ENST00000508343 HNRNPCP07910 306 aaKnown RBP eCLIP11.2□□□□□ -0.62
TRIO-211ENST00000508343 PSG1P11464 419 aa11.2□□□□□ -0.62
TRIO-211ENST00000508343 RPL11P62913 178 aaKnown RBP11.2□□□□□ -0.62
TRIO-211ENST00000508343 ZNF431Q8TF32 576 aaPredicted RBP11.2□□□□□ -0.62
TRIO-211ENST00000508343 GRAMD2BQ96HH9 432 aa11.2□□□□□ -0.62
TRIO-211ENST00000508343 GGTLC1Q9BX51 225 aa11.2□□□□□ -0.62
TRIO-211ENST00000508343 MS4A6AQ9H2W1 248 aa11.2□□□□□ -0.62
TRIO-211ENST00000508343 U3KQE9 123 aa11.2□□□□□ -0.62
TRIO-211ENST00000508343 IGKV1D-37A0A075B6S9 117 aa11.19□□□□□ -0.62
TRIO-211ENST00000508343 TRAV2A0A0B4J234 112 aa11.19□□□□□ -0.62
TRIO-211ENST00000508343 DNASE2O00115 360 aaPredicted RBP11.19□□□□□ -0.62
TRIO-211ENST00000508343 P2RY1P47900 373 aa11.19□□□□□ -0.62
TRIO-211ENST00000508343 USF2Q15853 346 aaPredicted RBP11.19□□□□□ -0.62
TRIO-211ENST00000508343 WFDC3Q8IUB2 231 aa11.19□□□□□ -0.62
TRIO-211ENST00000508343 ZBTB8BQ8NAP8 495 aaPredicted RBP11.19□□□□□ -0.62
TRIO-211ENST00000508343 OR51G1Q8NGK1 321 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms