RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 MED12LQ86YW9 2145 aa4.03□□□□□ -1.76
HMGB3P16-201ENST00000508037 DOCK11Q5JSL3 2073 aa4.02□□□□□ -1.77
HMGB3P16-201ENST00000508037 CHD9Q3L8U1 2897 aa4.02□□□□□ -1.77
HMGB3P16-201ENST00000508037 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.02□□□□□ -1.77
HMGB3P16-201ENST00000508037 TRAV17A0A0B4J275 112 aa4.02□□□□□ -1.77
HMGB3P16-201ENST00000508037 IGHV1-18A0A0C4DH31 117 aa4.02□□□□□ -1.77
HMGB3P16-201ENST00000508037 TRBV6-1A0A0K0K1D8 114 aa4.02□□□□□ -1.77
HMGB3P16-201ENST00000508037 PSMB11A5LHX3 300 aa4.02□□□□□ -1.77
HMGB3P16-201ENST00000508037 K7EQM0 130 aa4.02□□□□□ -1.77
HMGB3P16-201ENST00000508037 K7ERU9 68 aa4.02□□□□□ -1.77
HMGB3P16-201ENST00000508037 CD5LO43866 347 aa4.02□□□□□ -1.77
HMGB3P16-201ENST00000508037 FRMD6-AS1P0C7T7 363 aa4.02□□□□□ -1.77
HMGB3P16-201ENST00000508037 SP9P0CG40 484 aa4.02□□□□□ -1.77
HMGB3P16-201ENST00000508037 SAA1P0DJI8 122 aaPredicted RBP4.02□□□□□ -1.77
HMGB3P16-201ENST00000508037 CT45A6P0DMU7 189 aa4.02□□□□□ -1.77
HMGB3P16-201ENST00000508037 CT45A5P0DMU8 189 aa4.02□□□□□ -1.77
HMGB3P16-201ENST00000508037 CT45A7P0DMV0 189 aa4.02□□□□□ -1.77
HMGB3P16-201ENST00000508037 MC5RP33032 325 aa4.02□□□□□ -1.77
HMGB3P16-201ENST00000508037 MYCNOSP40205 109 aa4.02□□□□□ -1.77
HMGB3P16-201ENST00000508037 KIR2DL2P43627 348 aaPredicted RBP4.02□□□□□ -1.77
HMGB3P16-201ENST00000508037 CSN1S1P47710 185 aa4.02□□□□□ -1.77
HMGB3P16-201ENST00000508037 CAMPP49913 170 aa4.02□□□□□ -1.77
HMGB3P16-201ENST00000508037 RBX1P62877 108 aa4.02□□□□□ -1.77
HMGB3P16-201ENST00000508037 SEC11AP67812 179 aa4.02□□□□□ -1.77
HMGB3P16-201ENST00000508037 RIGQ13278 110 aa4.02□□□□□ -1.77
HMGB3P16-201ENST00000508037 ESPL1Q14674 2120 aa4.02□□□□□ -1.77
HMGB3P16-201ENST00000508037 VMA21Q3ZAQ7 101 aa4.02□□□□□ -1.77
HMGB3P16-201ENST00000508037 Q6AWC8 147 aa4.02□□□□□ -1.77
HMGB3P16-201ENST00000508037 LCN12Q6JVE5 192 aa4.02□□□□□ -1.77
HMGB3P16-201ENST00000508037 EBLN2Q6P2I7 272 aa4.02□□□□□ -1.77
HMGB3P16-201ENST00000508037 UNQ5815/PRO19632Q6UWF5 114 aa4.02□□□□□ -1.77
HMGB3P16-201ENST00000508037 ZNF833PQ6ZTB9 187 aa4.02□□□□□ -1.77
HMGB3P16-201ENST00000508037 GTF2H5Q6ZYL4 71 aa4.02□□□□□ -1.77
HMGB3P16-201ENST00000508037 SSX8Q7RTT4 187 aa4.02□□□□□ -1.77
HMGB3P16-201ENST00000508037 MOGAT3Q86VF5 341 aa4.02□□□□□ -1.77
HMGB3P16-201ENST00000508037 ATOH7Q8N100 152 aa4.02□□□□□ -1.77
HMGB3P16-201ENST00000508037 ZCCHC24Q8N2G6 241 aaKnown RBP4.02□□□□□ -1.77
HMGB3P16-201ENST00000508037 DEFB125Q8N687 156 aa4.02□□□□□ -1.77
HMGB3P16-201ENST00000508037 ZNRF1Q8ND25 227 aa4.02□□□□□ -1.77
HMGB3P16-201ENST00000508037 OR4F17Q8NGA8 305 aa4.02□□□□□ -1.77
HMGB3P16-201ENST00000508037 OR4C13Q8NGP0 309 aa4.02□□□□□ -1.77
HMGB3P16-201ENST00000508037 OR9G1Q8NH87 305 aa4.02□□□□□ -1.77
HMGB3P16-201ENST00000508037 OR2T6Q8NHC8 308 aa4.02□□□□□ -1.77
HMGB3P16-201ENST00000508037 DPF1Q92782 380 aa4.02□□□□□ -1.77
HMGB3P16-201ENST00000508037 FLYWCH2Q96CP2 140 aaKnown RBP4.02□□□□□ -1.77
HMGB3P16-201ENST00000508037 FXYD5Q96DB9 178 aa4.02□□□□□ -1.77
HMGB3P16-201ENST00000508037 HARBI1Q96MB7 349 aa4.02□□□□□ -1.77
HMGB3P16-201ENST00000508037 AP1S3Q96PC3 154 aa4.02□□□□□ -1.77
HMGB3P16-201ENST00000508037 TRGV9Q99603 122 aa4.02□□□□□ -1.77
HMGB3P16-201ENST00000508037 SSBP3Q9BWW4 388 aaPredicted RBP4.02□□□□□ -1.77
HMGB3P16-201ENST00000508037 PEF1Q9UBV8 284 aaKnown RBP4.02□□□□□ -1.77
HMGB3P16-201ENST00000508037 WASHC3Q9Y3C0 194 aa4.02□□□□□ -1.77
HMGB3P16-201ENST00000508037 USF3Q68DE3 2245 aa4.02□□□□□ -1.77
HMGB3P16-201ENST00000508037 FREM1Q5H8C1 2179 aa4.02□□□□□ -1.77
HMGB3P16-201ENST00000508037 CNTRLQ7Z7A1 2325 aa4.01□□□□□ -1.77
HMGB3P16-201ENST00000508037 GTF3C1Q12789 2109 aa4.01□□□□□ -1.77
HMGB3P16-201ENST00000508037 IGLV3-9A0A075B6K5 115 aa4.01□□□□□ -1.77
HMGB3P16-201ENST00000508037 IGKV1OR2-108A0A075B7D4 117 aa4.01□□□□□ -1.77
HMGB3P16-201ENST00000508037 IGHV3OR15-7A0A075B7D8 119 aa4.01□□□□□ -1.77
HMGB3P16-201ENST00000508037 LOC102724200A0A096LPH7 203 aaPredicted RBP4.01□□□□□ -1.77
HMGB3P16-201ENST00000508037 A6NDN8 102 aa4.01□□□□□ -1.77
HMGB3P16-201ENST00000508037 NUDT3O95989 172 aa4.01□□□□□ -1.77
HMGB3P16-201ENST00000508037 CA1P00915 261 aaPredicted RBP4.01□□□□□ -1.77
HMGB3P16-201ENST00000508037 LTAP01374 205 aa4.01□□□□□ -1.77
HMGB3P16-201ENST00000508037 TFF1P04155 84 aa4.01□□□□□ -1.77
HMGB3P16-201ENST00000508037 NBEAP1P0C6P0 100 aa4.01□□□□□ -1.77
HMGB3P16-201ENST00000508037 TNFRSF1AP19438 455 aa4.01□□□□□ -1.77
HMGB3P16-201ENST00000508037 LGALS7P47929 136 aa4.01□□□□□ -1.77
HMGB3P16-201ENST00000508037 TNFAIP6P98066 277 aaPredicted RBP4.01□□□□□ -1.77
HMGB3P16-201ENST00000508037 PAX2Q02962 417 aa4.01□□□□□ -1.77
HMGB3P16-201ENST00000508037 C21orf62-AS1Q17RA5 79 aa4.01□□□□□ -1.77
HMGB3P16-201ENST00000508037 TIMM23BQ5SRD1 257 aa4.01□□□□□ -1.77
HMGB3P16-201ENST00000508037 BVES-AS1Q5T3Y7 98 aa4.01□□□□□ -1.77
HMGB3P16-201ENST00000508037 TEX36Q5VZQ5 186 aa4.01□□□□□ -1.77
HMGB3P16-201ENST00000508037 PRR27Q6MZM9 219 aa4.01□□□□□ -1.77
HMGB3P16-201ENST00000508037 ZNF788Q6ZQV5 615 aa4.01□□□□□ -1.77
HMGB3P16-201ENST00000508037 LINC00305Q7Z4B0 112 aa4.01□□□□□ -1.77
HMGB3P16-201ENST00000508037 SPATA12Q7Z6I5 190 aa4.01□□□□□ -1.77
HMGB3P16-201ENST00000508037 KRTAP19-1Q8IUB9 90 aa4.01□□□□□ -1.77
HMGB3P16-201ENST00000508037 C1orf210Q8IVY1 113 aa4.01□□□□□ -1.77
HMGB3P16-201ENST00000508037 LINC00311Q8N616 119 aa4.01□□□□□ -1.77
HMGB3P16-201ENST00000508037 OR5AN1Q8NGI8 311 aa4.01□□□□□ -1.77
HMGB3P16-201ENST00000508037 OR1N2Q8NGR9 330 aa4.01□□□□□ -1.77
HMGB3P16-201ENST00000508037 OR10AG1Q8NH19 301 aa4.01□□□□□ -1.77
HMGB3P16-201ENST00000508037 RNASE8Q8TDE3 154 aaKnown RBP4.01□□□□□ -1.77
HMGB3P16-201ENST00000508037 ITLN1Q8WWA0 313 aa4.01□□□□□ -1.77
HMGB3P16-201ENST00000508037 NPIPB3Q92617 1050 aa4.01□□□□□ -1.77
HMGB3P16-201ENST00000508037 TMEM186Q96B77 213 aa4.01□□□□□ -1.77
HMGB3P16-201ENST00000508037 LOXL4Q96JB6 756 aa4.01□□□□□ -1.77
HMGB3P16-201ENST00000508037 GAFA1Q96PS6 74 aa4.01□□□□□ -1.77
HMGB3P16-201ENST00000508037 VPS25Q9BRG1 176 aa4.01□□□□□ -1.77
HMGB3P16-201ENST00000508037 PRSS22Q9GZN4 317 aa4.01□□□□□ -1.77
HMGB3P16-201ENST00000508037 ZNF71Q9NQZ8 489 aaPredicted RBP4.01□□□□□ -1.77
HMGB3P16-201ENST00000508037 OTORQ9NRC9 128 aa4.01□□□□□ -1.77
HMGB3P16-201ENST00000508037 TMEM14CQ9P0S9 112 aa4.01□□□□□ -1.77
HMGB3P16-201ENST00000508037 FZR1Q9UM11 496 aa4.01□□□□□ -1.77
HMGB3P16-201ENST00000508037 SLC25A15Q9Y619 301 aa4.01□□□□□ -1.77
HMGB3P16-201ENST00000508037 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.01□□□□□ -1.77
HMGB3P16-201ENST00000508037 TRANK1O15050 2925 aa4.01□□□□□ -1.77
HMGB3P16-201ENST00000508037 PTPRBP23467 1997 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms