RNA–Protein interactions for RNA: ENST00000507875.5

CLCN3-206, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2

Gene CLCN3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-206ENST00000507875 CCL17Q92583 94 aa5.68□□□□□ -1.5
CLCN3-206ENST00000507875 URB1-AS1Q96HZ7 61 aa5.68□□□□□ -1.5
CLCN3-206ENST00000507875 ADTRPQ96IZ2 230 aa5.68□□□□□ -1.5
CLCN3-206ENST00000507875 PLEKHF2Q9H8W4 249 aa5.68□□□□□ -1.5
CLCN3-206ENST00000507875 LSM5Q9Y4Y9 91 aaKnown RBP5.68□□□□□ -1.5
CLCN3-206ENST00000507875 PKDREJQ9NTG1 2253 aa5.68□□□□□ -1.5
CLCN3-206ENST00000507875 APCP25054 2843 aa5.68□□□□□ -1.5
CLCN3-206ENST00000507875 IGKV1D-13A0A0B4J2D9 117 aa5.68□□□□□ -1.5
CLCN3-206ENST00000507875 FAM74A7A6NL05 159 aa5.68□□□□□ -1.5
CLCN3-206ENST00000507875 YPEL1O60688 119 aa5.68□□□□□ -1.5
CLCN3-206ENST00000507875 NDUFB8O95169 186 aa5.68□□□□□ -1.5
CLCN3-206ENST00000507875 FAM157CP0CG43 387 aa5.68□□□□□ -1.5
CLCN3-206ENST00000507875 CGB3P0DN86 165 aa5.68□□□□□ -1.5
CLCN3-206ENST00000507875 CGB7P0DN87 165 aa5.68□□□□□ -1.5
CLCN3-206ENST00000507875 IGKV1-13P0DP09 117 aa5.68□□□□□ -1.5
CLCN3-206ENST00000507875 RPL35AP18077 110 aaKnown RBP5.68□□□□□ -1.5
CLCN3-206ENST00000507875 IL2RGP31785 369 aa5.68□□□□□ -1.5
CLCN3-206ENST00000507875 KIAA0141Q14154 515 aaPredicted RBP5.68□□□□□ -1.5
CLCN3-206ENST00000507875 FAM74A3Q4VXF1 159 aa5.68□□□□□ -1.5
CLCN3-206ENST00000507875 RPL7L1Q6DKI1 246 aaKnown RBP5.68□□□□□ -1.5
CLCN3-206ENST00000507875 COX8CQ7Z4L0 72 aa5.68□□□□□ -1.5
CLCN3-206ENST00000507875 SLC35G3Q8N808 338 aa5.68□□□□□ -1.5
CLCN3-206ENST00000507875 OR1S2Q8NGQ3 325 aa5.68□□□□□ -1.5
CLCN3-206ENST00000507875 C8orf46Q8TAG6 207 aa5.68□□□□□ -1.5
CLCN3-206ENST00000507875 RPUSD4Q96CM3 377 aaKnown RBP5.68□□□□□ -1.5
CLCN3-206ENST00000507875 YPEL2Q96QA6 119 aa5.68□□□□□ -1.5
CLCN3-206ENST00000507875 TMEM222Q9H0R3 208 aa5.68□□□□□ -1.5
CLCN3-206ENST00000507875 TAF9BQ9HBM6 251 aa5.68□□□□□ -1.5
CLCN3-206ENST00000507875 LRBAP50851 2863 aa5.67□□□□□ -1.5
CLCN3-206ENST00000507875 CADP27708 2225 aa5.67□□□□□ -1.5
CLCN3-206ENST00000507875 IGHV3OR15-7A0A075B7D8 119 aa5.67□□□□□ -1.5
CLCN3-206ENST00000507875 TRBV9A0A0B4J1U6 114 aa5.67□□□□□ -1.5
CLCN3-206ENST00000507875 DUXBA0A1W2PPF3 345 aa5.67□□□□□ -1.5
CLCN3-206ENST00000507875 NDUFA7O95182 113 aa5.67□□□□□ -1.5
CLCN3-206ENST00000507875 GYPAP02724 150 aa5.67□□□□□ -1.5
CLCN3-206ENST00000507875 IGF1P05019 195 aa5.67□□□□□ -1.5
CLCN3-206ENST00000507875 SOD3P08294 240 aa5.67□□□□□ -1.5
CLCN3-206ENST00000507875 RCC1P18754 421 aaPredicted RBP5.67□□□□□ -1.5
CLCN3-206ENST00000507875 EIF5AL1Q6IS14 154 aaKnown RBP5.67□□□□□ -1.5
CLCN3-206ENST00000507875 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.67□□□□□ -1.5
CLCN3-206ENST00000507875 PRO1933Q9H354 126 aa5.67□□□□□ -1.5
CLCN3-206ENST00000507875 RCL1Q9Y2P8 373 aaKnown RBP5.67□□□□□ -1.5
CLCN3-206ENST00000507875 PLCE1Q9P212 2302 aa5.67□□□□□ -1.5
CLCN3-206ENST00000507875 A0A1W2PRF3 423 aa5.67□□□□□ -1.5
CLCN3-206ENST00000507875 A0A1W2PRM7 423 aa5.67□□□□□ -1.5
CLCN3-206ENST00000507875 C15orf65H3BRN8 121 aa5.67□□□□□ -1.5
CLCN3-206ENST00000507875 M0R143 59 aa5.67□□□□□ -1.5
CLCN3-206ENST00000507875 HSD17B6O14756 317 aa5.67□□□□□ -1.5
CLCN3-206ENST00000507875 CDS2O95674 445 aa5.67□□□□□ -1.5
CLCN3-206ENST00000507875 COL8A2P25067 703 aa5.67□□□□□ -1.5
CLCN3-206ENST00000507875 P2RY1P47900 373 aa5.67□□□□□ -1.5
CLCN3-206ENST00000507875 RUNX1Q01196 453 aa5.67□□□□□ -1.5
CLCN3-206ENST00000507875 TCTEX1D4Q5JR98 221 aa5.67□□□□□ -1.5
CLCN3-206ENST00000507875 LDLRAD2Q5SZI1 272 aa5.67□□□□□ -1.5
CLCN3-206ENST00000507875 TMEM219Q86XT9 240 aa5.67□□□□□ -1.5
CLCN3-206ENST00000507875 ZNF695Q8IW36 515 aa5.67□□□□□ -1.5
CLCN3-206ENST00000507875 ABHD12Q8N2K0 398 aa5.67□□□□□ -1.5
CLCN3-206ENST00000507875 MAPKAPK5-AS1Q8N8E1 139 aa5.67□□□□□ -1.5
CLCN3-206ENST00000507875 DMBX1Q8NFW5 382 aa5.67□□□□□ -1.5
CLCN3-206ENST00000507875 OR8B3Q8NGG8 313 aa5.67□□□□□ -1.5
CLCN3-206ENST00000507875 TMEM37Q8WXS4 190 aa5.67□□□□□ -1.5
CLCN3-206ENST00000507875 OR8B2Q96RD0 313 aa5.67□□□□□ -1.5
CLCN3-206ENST00000507875 CCL13Q99616 98 aa5.67□□□□□ -1.5
CLCN3-206ENST00000507875 CCL28Q9NRJ3 127 aa5.67□□□□□ -1.5
CLCN3-206ENST00000507875 SIGLEC8Q9NYZ4 499 aa5.67□□□□□ -1.5
CLCN3-206ENST00000507875 ZNF705EA8MWA4 302 aaPredicted RBP5.66□□□□□ -1.5
CLCN3-206ENST00000507875 C12orf77C9JDV5 145 aa5.66□□□□□ -1.5
CLCN3-206ENST00000507875 K7ERU9 68 aa5.66□□□□□ -1.5
CLCN3-206ENST00000507875 HBZP02008 142 aa5.66□□□□□ -1.5
CLCN3-206ENST00000507875 GLIPR1P48060 266 aa5.66□□□□□ -1.5
CLCN3-206ENST00000507875 TCF24Q7RTU0 167 aa5.66□□□□□ -1.5
CLCN3-206ENST00000507875 PRR26Q8N8Z3 221 aa5.66□□□□□ -1.5
CLCN3-206ENST00000507875 UBAC2Q8NBM4 344 aa5.66□□□□□ -1.5
CLCN3-206ENST00000507875 C11orf45Q8TAV5 145 aa5.66□□□□□ -1.5
CLCN3-206ENST00000507875 IL22RA2Q969J5 263 aa5.66□□□□□ -1.5
CLCN3-206ENST00000507875 ARL11Q969Q4 196 aa5.66□□□□□ -1.5
CLCN3-206ENST00000507875 SMIM8Q96KF7 97 aa5.66□□□□□ -1.5
CLCN3-206ENST00000507875 PATZ1Q9HBE1 687 aaKnown RBP5.66□□□□□ -1.5
CLCN3-206ENST00000507875 IDI2-AS1Q9NZ38 188 aa5.66□□□□□ -1.5
CLCN3-206ENST00000507875 ABCA12Q86UK0 2595 aa5.66□□□□□ -1.5
CLCN3-206ENST00000507875 DCHS2Q6V1P9 2916 aa5.66□□□□□ -1.5
CLCN3-206ENST00000507875 IGHV3-64DA0A0J9YX35 117 aa5.66□□□□□ -1.5
CLCN3-206ENST00000507875 A8MWP6 167 aa5.66□□□□□ -1.5
CLCN3-206ENST00000507875 PGLYRP1O75594 196 aaPredicted RBP5.66□□□□□ -1.5
CLCN3-206ENST00000507875 REG1AP05451 166 aa5.66□□□□□ -1.5
CLCN3-206ENST00000507875 GPR6P46095 362 aaPredicted RBP5.66□□□□□ -1.5
CLCN3-206ENST00000507875 KRTAP10-9P60411 292 aa5.66□□□□□ -1.5
CLCN3-206ENST00000507875 KLF5Q13887 457 aaPredicted RBP5.66□□□□□ -1.5
CLCN3-206ENST00000507875 FAM78BQ5VT40 261 aa5.66□□□□□ -1.5
CLCN3-206ENST00000507875 Q71RC1 249 aaPredicted RBP5.66□□□□□ -1.5
CLCN3-206ENST00000507875 KIR3DL3Q8N743 410 aa5.66□□□□□ -1.5
CLCN3-206ENST00000507875 OR5AU1Q8NGC0 362 aa5.66□□□□□ -1.5
CLCN3-206ENST00000507875 OR13A1Q8NGR1 328 aa5.66□□□□□ -1.5
CLCN3-206ENST00000507875 C8orf49Q96NF6 230 aa5.66□□□□□ -1.5
CLCN3-206ENST00000507875 CCL19Q99731 98 aa5.66□□□□□ -1.5
CLCN3-206ENST00000507875 SPIN2AQ99865 258 aa5.66□□□□□ -1.5
CLCN3-206ENST00000507875 SPIN2BQ9BPZ2 258 aa5.66□□□□□ -1.5
CLCN3-206ENST00000507875 SMIM3Q9BZL3 60 aa5.66□□□□□ -1.5
CLCN3-206ENST00000507875 FNDC4Q9H6D8 234 aaPredicted RBP5.66□□□□□ -1.5
CLCN3-206ENST00000507875 MMP26Q9NRE1 261 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms