RNA–Protein interactions for RNA: ENST00000507638.1

VEGFC-201, Transcript of vascular endothelial growth factor C, humanhuman

TSL 3

Gene VEGFC, Length 759 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFC-201ENST00000507638 SFRP2Q96HF1 295 aa4.54□□□□□ -1.68
VEGFC-201ENST00000507638 OR4C12Q96R67 309 aa4.54□□□□□ -1.68
VEGFC-201ENST00000507638 CHRDL1Q9BU40 450 aa4.54□□□□□ -1.68
VEGFC-201ENST00000507638 GNB1LQ9BYB4 327 aa4.54□□□□□ -1.68
VEGFC-201ENST00000507638 PATZ1Q9HBE1 687 aaKnown RBP4.54□□□□□ -1.68
VEGFC-201ENST00000507638 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.54□□□□□ -1.68
VEGFC-201ENST00000507638 SLC35D1Q9NTN3 355 aa4.54□□□□□ -1.68
VEGFC-201ENST00000507638 IL36BQ9NZH7 164 aa4.54□□□□□ -1.68
VEGFC-201ENST00000507638 TAAR3PQ9P1P4 343 aa4.54□□□□□ -1.68
VEGFC-201ENST00000507638 ARL2-SNX15V9GYD0 113 aa4.54□□□□□ -1.68
VEGFC-201ENST00000507638 NKX6-3A6NJ46 265 aa4.53□□□□□ -1.68
VEGFC-201ENST00000507638 J3QLI3 93 aa4.53□□□□□ -1.68
VEGFC-201ENST00000507638 WNT9BO14905 357 aa4.53□□□□□ -1.68
VEGFC-201ENST00000507638 SYNGR3O43761 229 aa4.53□□□□□ -1.68
VEGFC-201ENST00000507638 ANGPTL7O43827 346 aa4.53□□□□□ -1.68
VEGFC-201ENST00000507638 ZNF253O75346 499 aa4.53□□□□□ -1.68
VEGFC-201ENST00000507638 CXorf1O96002 111 aa4.53□□□□□ -1.68
VEGFC-201ENST00000507638 IRF2P14316 349 aa4.53□□□□□ -1.68
VEGFC-201ENST00000507638 IGLL1P15814 213 aa4.53□□□□□ -1.68
VEGFC-201ENST00000507638 ARR3P36575 388 aa4.53□□□□□ -1.68
VEGFC-201ENST00000507638 CDC34P49427 236 aaPredicted RBP4.53□□□□□ -1.68
VEGFC-201ENST00000507638 THBS3P49746 956 aa4.53□□□□□ -1.68
VEGFC-201ENST00000507638 HNRNPA3P51991 378 aaKnown RBP4.53□□□□□ -1.68
VEGFC-201ENST00000507638 FGF8P55075 233 aaPredicted RBP4.53□□□□□ -1.68
VEGFC-201ENST00000507638 DSCR4P56555 118 aaPredicted RBP4.53□□□□□ -1.68
VEGFC-201ENST00000507638 KRTAP10-11P60412 298 aa4.53□□□□□ -1.68
VEGFC-201ENST00000507638 LMO4P61968 165 aa4.53□□□□□ -1.68
VEGFC-201ENST00000507638 GNB2P62879 340 aa4.53□□□□□ -1.68
VEGFC-201ENST00000507638 HTD2P86397 168 aa4.53□□□□□ -1.68
VEGFC-201ENST00000507638 ZNF90Q03938 601 aa4.53□□□□□ -1.68
VEGFC-201ENST00000507638 TMEM267Q0VDI3 215 aaPredicted RBP4.53□□□□□ -1.68
VEGFC-201ENST00000507638 UBE2V1Q13404 147 aa4.53□□□□□ -1.68
VEGFC-201ENST00000507638 RAB31Q13636 194 aa4.53□□□□□ -1.68
VEGFC-201ENST00000507638 PLECQ15149 4684 aaKnown RBP4.53□□□□□ -1.68
VEGFC-201ENST00000507638 ZNF726P1Q15940 193 aa4.53□□□□□ -1.68
VEGFC-201ENST00000507638 RTL8BQ17RB0 113 aa4.53□□□□□ -1.68
VEGFC-201ENST00000507638 HLA-DRB5Q30154 266 aa4.53□□□□□ -1.68
VEGFC-201ENST00000507638 KRTAP27-1Q3LI81 207 aa4.53□□□□□ -1.68
VEGFC-201ENST00000507638 MORN2Q502X0 79 aa4.53□□□□□ -1.68
VEGFC-201ENST00000507638 SPANXN5Q5MJ07 72 aa4.53□□□□□ -1.68
VEGFC-201ENST00000507638 FFAR4Q5NUL3 377 aa4.53□□□□□ -1.68
VEGFC-201ENST00000507638 RASL11AQ6T310 242 aa4.53□□□□□ -1.68
VEGFC-201ENST00000507638 LINC01551Q86U37 167 aa4.53□□□□□ -1.68
VEGFC-201ENST00000507638 Q8IYB0 196 aa4.53□□□□□ -1.68
VEGFC-201ENST00000507638 C1orf174Q8IYL3 243 aa4.53□□□□□ -1.68
VEGFC-201ENST00000507638 C11orf42Q8N5U0 333 aa4.53□□□□□ -1.68
VEGFC-201ENST00000507638 FADS6Q8N9I5 356 aa4.53□□□□□ -1.68
VEGFC-201ENST00000507638 OR5A2Q8NGI9 324 aa4.53□□□□□ -1.68
VEGFC-201ENST00000507638 PIGCQ92535 297 aa4.53□□□□□ -1.68
VEGFC-201ENST00000507638 NABP1Q96AH0 204 aa4.53□□□□□ -1.68
VEGFC-201ENST00000507638 TXN2Q99757 166 aa4.53□□□□□ -1.68
VEGFC-201ENST00000507638 ASCL2Q99929 193 aa4.53□□□□□ -1.68
VEGFC-201ENST00000507638 RSG1Q9BU20 258 aa4.53□□□□□ -1.68
VEGFC-201ENST00000507638 DNAJC4Q9NNZ3 241 aa4.53□□□□□ -1.68
VEGFC-201ENST00000507638 CCL28Q9NRJ3 127 aa4.53□□□□□ -1.68
VEGFC-201ENST00000507638 KCNIP1Q9NZI2 227 aa4.53□□□□□ -1.68
VEGFC-201ENST00000507638 CACNG5Q9UF02 275 aa4.53□□□□□ -1.68
VEGFC-201ENST00000507638 RBM7Q9Y580 266 aaKnown RBP4.53□□□□□ -1.68
VEGFC-201ENST00000507638 SOX21Q9Y651 276 aaPredicted RBP4.53□□□□□ -1.68
VEGFC-201ENST00000507638 TRAV30A0A087WSZ9 112 aa4.52□□□□□ -1.69
VEGFC-201ENST00000507638 hCG_38984A0A1B0GV85 526 aa4.52□□□□□ -1.69
VEGFC-201ENST00000507638 OR5B21A6NL26 309 aa4.52□□□□□ -1.69
VEGFC-201ENST00000507638 FAM90A9PA6NNJ1 464 aa4.52□□□□□ -1.69
VEGFC-201ENST00000507638 C9JCJ5 164 aa4.52□□□□□ -1.69
VEGFC-201ENST00000507638 RAB29O14966 203 aa4.52□□□□□ -1.69
VEGFC-201ENST00000507638 YPEL1O60688 119 aa4.52□□□□□ -1.69
VEGFC-201ENST00000507638 PAGE4O60829 102 aa4.52□□□□□ -1.69
VEGFC-201ENST00000507638 TMEM50AO95807 157 aa4.52□□□□□ -1.69
VEGFC-201ENST00000507638 TOMM40O96008 361 aa4.52□□□□□ -1.69
VEGFC-201ENST00000507638 CD1BP29016 333 aa4.52□□□□□ -1.69
VEGFC-201ENST00000507638 GNG10P50151 68 aa4.52□□□□□ -1.69
VEGFC-201ENST00000507638 TGFBR3Q03167 851 aa4.52□□□□□ -1.69
VEGFC-201ENST00000507638 RPEL1Q2QD12 228 aa4.52□□□□□ -1.69
VEGFC-201ENST00000507638 VWC2Q2TAL6 325 aa4.52□□□□□ -1.69
VEGFC-201ENST00000507638 CEACAM21Q3KPI0 293 aa4.52□□□□□ -1.69
VEGFC-201ENST00000507638 PIGYQ3MUY2 71 aa4.52□□□□□ -1.69
VEGFC-201ENST00000507638 TPTE2P1Q5T6R2 138 aa4.52□□□□□ -1.69
VEGFC-201ENST00000507638 ODF3L1Q8IXM7 274 aa4.52□□□□□ -1.69
VEGFC-201ENST00000507638 RPP25LQ8N5L8 163 aaKnown RBP4.52□□□□□ -1.69
VEGFC-201ENST00000507638 OR51H1Q8NH63 302 aa4.52□□□□□ -1.69
VEGFC-201ENST00000507638 YPEL2Q96QA6 119 aa4.52□□□□□ -1.69
VEGFC-201ENST00000507638 KLHDC3Q9BQ90 382 aa4.52□□□□□ -1.69
VEGFC-201ENST00000507638 HSPB9Q9BQS6 159 aa4.52□□□□□ -1.69
VEGFC-201ENST00000507638 QTRT1Q9BXR0 403 aaKnown RBP4.52□□□□□ -1.69
VEGFC-201ENST00000507638 RAB1BQ9H0U4 201 aa4.52□□□□□ -1.69
VEGFC-201ENST00000507638 LAMTOR2Q9Y2Q5 125 aa4.52□□□□□ -1.69
VEGFC-201ENST00000507638 TBL2Q9Y4P3 447 aaKnown RBP4.52□□□□□ -1.69
VEGFC-201ENST00000507638 MPC1Q9Y5U8 109 aa4.52□□□□□ -1.69
VEGFC-201ENST00000507638 PCNX3Q9H6A9 2034 aa4.51□□□□□ -1.69
VEGFC-201ENST00000507638 UBE2L5PA0A1B0GUS4 154 aa4.51□□□□□ -1.69
VEGFC-201ENST00000507638 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.51□□□□□ -1.69
VEGFC-201ENST00000507638 FCN1O00602 326 aa4.51□□□□□ -1.69
VEGFC-201ENST00000507638 EFNA2O43921 213 aa4.51□□□□□ -1.69
VEGFC-201ENST00000507638 NXPH2O95156 264 aa4.51□□□□□ -1.69
VEGFC-201ENST00000507638 HLA-DQA1P01909 254 aa4.51□□□□□ -1.69
VEGFC-201ENST00000507638 PPBPP02775 128 aa4.51□□□□□ -1.69
VEGFC-201ENST00000507638 GPX1P07203 203 aa4.51□□□□□ -1.69
VEGFC-201ENST00000507638 SCTP09683 121 aa4.51□□□□□ -1.69
VEGFC-201ENST00000507638 OR10J4P0C629 311 aa4.51□□□□□ -1.69
VEGFC-201ENST00000507638 IAPPP10997 89 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms