RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 Q6Q795 121 aa0.86□□□□□ -2.27
LSM6-205ENST00000507449 TRAPPC6BQ86SZ2 158 aa0.86□□□□□ -2.27
LSM6-205ENST00000507449 OR4C6Q8NH72 309 aa0.86□□□□□ -2.27
LSM6-205ENST00000507449 GPR146Q96CH1 333 aa0.86□□□□□ -2.27
LSM6-205ENST00000507449 C2orf50Q96LR7 162 aa0.86□□□□□ -2.27
LSM6-205ENST00000507449 SIGMAR1Q99720 223 aa0.86□□□□□ -2.27
LSM6-205ENST00000507449 TMEM133Q9H2Q1 129 aa0.86□□□□□ -2.27
LSM6-205ENST00000507449 NCOA1Q15788 1441 aa0.86□□□□□ -2.27
LSM6-205ENST00000507449 MICAL3Q7RTP6 2002 aa0.86□□□□□ -2.27
LSM6-205ENST00000507449 HEATR5BQ9P2D3 2071 aa0.85□□□□□ -2.27
LSM6-205ENST00000507449 C1orf196B1AJZ1 125 aa0.85□□□□□ -2.27
LSM6-205ENST00000507449 OR2B3O76000 313 aa0.85□□□□□ -2.27
LSM6-205ENST00000507449 OR7C1O76099 320 aaPredicted RBP0.85□□□□□ -2.27
LSM6-205ENST00000507449 UBL3O95164 117 aa0.85□□□□□ -2.27
LSM6-205ENST00000507449 IFNA6P05013 189 aa0.85□□□□□ -2.27
LSM6-205ENST00000507449 BAALC-AS2P0C853 105 aa0.85□□□□□ -2.27
LSM6-205ENST00000507449 MGST1P10620 155 aaKnown RBP0.85□□□□□ -2.27
LSM6-205ENST00000507449 CYBAP13498 195 aa0.85□□□□□ -2.27
LSM6-205ENST00000507449 S100A4P26447 101 aaKnown RBP0.85□□□□□ -2.27
LSM6-205ENST00000507449 BRS3P32247 399 aa0.85□□□□□ -2.27
LSM6-205ENST00000507449 SERPINB9P50453 376 aa0.85□□□□□ -2.27
LSM6-205ENST00000507449 YPEL3P61236 119 aaPredicted RBP0.85□□□□□ -2.27
LSM6-205ENST00000507449 DEFB113Q30KQ7 82 aa0.85□□□□□ -2.27
LSM6-205ENST00000507449 PHF13Q86YI8 300 aaPredicted RBP0.85□□□□□ -2.27
LSM6-205ENST00000507449 OR8D4Q8NGM9 314 aa0.85□□□□□ -2.27
LSM6-205ENST00000507449 DGCR14Q96DF8 476 aaKnown RBP0.85□□□□□ -2.27
LSM6-205ENST00000507449 ODF3Q96PU9 254 aa0.85□□□□□ -2.27
LSM6-205ENST00000507449 EPDR1Q9UM22 224 aa0.85□□□□□ -2.27
LSM6-205ENST00000507449 DIDO1Q9BTC0 2240 aaKnown RBP0.84□□□□□ -2.27
LSM6-205ENST00000507449 LOC110117498A0A087WWA1 95 aa0.84□□□□□ -2.27
LSM6-205ENST00000507449 A0A087X0T9 212 aa0.84□□□□□ -2.27
LSM6-205ENST00000507449 TRAV12-1A0A0B4J245 112 aa0.84□□□□□ -2.27
LSM6-205ENST00000507449 FAM159BA6NKW6 160 aa0.84□□□□□ -2.27
LSM6-205ENST00000507449 CLDN25C9JDP6 229 aa0.84□□□□□ -2.27
LSM6-205ENST00000507449 RNASE4P34096 147 aaKnown RBP0.84□□□□□ -2.27
LSM6-205ENST00000507449 ZNF93P35789 620 aaPredicted RBP0.84□□□□□ -2.27
LSM6-205ENST00000507449 CNBPP62633 177 aaKnown RBP0.84□□□□□ -2.27
LSM6-205ENST00000507449 S100A7AQ86SG5 101 aa0.84□□□□□ -2.27
LSM6-205ENST00000507449 C3orf56Q8N813 242 aa0.84□□□□□ -2.27
LSM6-205ENST00000507449 OR10J5Q8NHC4 309 aa0.84□□□□□ -2.27
LSM6-205ENST00000507449 RNF122Q9H9V4 155 aa0.84□□□□□ -2.27
LSM6-205ENST00000507449 TVP23BQ9NYZ1 205 aa0.84□□□□□ -2.27
LSM6-205ENST00000507449 C22orf24Q9Y442 160 aa0.84□□□□□ -2.27
LSM6-205ENST00000507449 SNURFQ9Y675 71 aa0.84□□□□□ -2.27
LSM6-205ENST00000507449 INTS1Q8N201 2190 aaKnown RBP0.84□□□□□ -2.28
LSM6-205ENST00000507449 ZNF106Q9H2Y7 1883 aaKnown RBP0.84□□□□□ -2.28
LSM6-205ENST00000507449 MED1Q15648 1581 aaPredicted RBP0.83□□□□□ -2.28
LSM6-205ENST00000507449 TMEM210A6NLX4 147 aa0.83□□□□□ -2.28
LSM6-205ENST00000507449 GEMIN2O14893 280 aaKnown RBP0.83□□□□□ -2.28
LSM6-205ENST00000507449 CST2P09228 141 aa0.83□□□□□ -2.28
LSM6-205ENST00000507449 IL9P15248 144 aa0.83□□□□□ -2.28
LSM6-205ENST00000507449 RAB4BP61018 213 aa0.83□□□□□ -2.28
LSM6-205ENST00000507449 RHOGP84095 191 aa0.83□□□□□ -2.28
LSM6-205ENST00000507449 TSNQ15631 228 aaKnown RBP0.83□□□□□ -2.28
LSM6-205ENST00000507449 BRMS1LQ5PSV4 323 aa0.83□□□□□ -2.28
LSM6-205ENST00000507449 FAM19A2Q8N3H0 131 aa0.83□□□□□ -2.28
LSM6-205ENST00000507449 OR11H6Q8NGC7 330 aa0.83□□□□□ -2.28
LSM6-205ENST00000507449 STAG3L4Q8TBR4 150 aa0.83□□□□□ -2.28
LSM6-205ENST00000507449 HIST1H2BLQ99880 126 aa0.83□□□□□ -2.28
LSM6-205ENST00000507449 PARVBQ9HBI1 364 aa0.83□□□□□ -2.28
LSM6-205ENST00000507449 UTP11Q9Y3A2 253 aaKnown RBP0.83□□□□□ -2.28
LSM6-205ENST00000507449 RP1P56715 2156 aa0.83□□□□□ -2.28
LSM6-205ENST00000507449 PCF11O94913 1555 aaKnown RBP0.83□□□□□ -2.28
LSM6-205ENST00000507449 RTL1A6NKG5 1358 aa0.83□□□□□ -2.28
LSM6-205ENST00000507449 CACNA1BQ00975 2339 aa0.82□□□□□ -2.28
LSM6-205ENST00000507449 TRAV4A0A0B4J268 109 aa0.82□□□□□ -2.28
LSM6-205ENST00000507449 CAPZBP47756 277 aa0.82□□□□□ -2.28
LSM6-205ENST00000507449 REEP5Q00765 189 aa0.82□□□□□ -2.28
LSM6-205ENST00000507449 ZNF418Q8TF45 676 aaPredicted RBP0.82□□□□□ -2.28
LSM6-205ENST00000507449 SFT2D1Q8WV19 159 aa0.82□□□□□ -2.28
LSM6-205ENST00000507449 OBSCN-AS1Q96MR7 158 aa0.82□□□□□ -2.28
LSM6-205ENST00000507449 KIFC1Q9BW19 673 aa0.82□□□□□ -2.28
LSM6-205ENST00000507449 HS3ST2Q9Y278 367 aa0.82□□□□□ -2.28
LSM6-205ENST00000507449 ARFGEF3Q5TH69 2177 aa0.81□□□□□ -2.28
LSM6-205ENST00000507449 DLG5Q8TDM6 1919 aa0.81□□□□□ -2.28
LSM6-205ENST00000507449 A0A087WX48 190 aa0.81□□□□□ -2.28
LSM6-205ENST00000507449 TRBV6-8A0A0A6YYG3 113 aa0.81□□□□□ -2.28
LSM6-205ENST00000507449 CYB5BO43169 146 aa0.81□□□□□ -2.28
LSM6-205ENST00000507449 SULT1B1O43704 296 aa0.81□□□□□ -2.28
LSM6-205ENST00000507449 HYPMO75409 117 aa0.81□□□□□ -2.28
LSM6-205ENST00000507449 HSD11B1P28845 292 aa0.81□□□□□ -2.28
LSM6-205ENST00000507449 ATP5G3P48201 142 aa0.81□□□□□ -2.28
LSM6-205ENST00000507449 SPA17Q15506 151 aa0.81□□□□□ -2.28
LSM6-205ENST00000507449 ESRGQ1W209 222 aa0.81□□□□□ -2.28
LSM6-205ENST00000507449 LIN52Q52LA3 116 aa0.81□□□□□ -2.28
LSM6-205ENST00000507449 C1orf137Q5JT78 98 aa0.81□□□□□ -2.28
LSM6-205ENST00000507449 Q8IYB0 196 aa0.81□□□□□ -2.28
LSM6-205ENST00000507449 OR10X1Q8NGY0 326 aa0.81□□□□□ -2.28
LSM6-205ENST00000507449 NMNAT1Q9HAN9 279 aaPredicted RBP0.81□□□□□ -2.28
LSM6-205ENST00000507449 NHP2Q9NX24 153 aaKnown RBP0.81□□□□□ -2.28
LSM6-205ENST00000507449 SLC35A3Q9Y2D2 325 aa0.81□□□□□ -2.28
LSM6-205ENST00000507449 ZFP30Q9Y2G7 519 aa0.81□□□□□ -2.28
LSM6-205ENST00000507449 ADGRL3Q9HAR2 1447 aa0.81□□□□□ -2.28
LSM6-205ENST00000507449 TECTAO75443 2155 aa0.8□□□□□ -2.28
LSM6-205ENST00000507449 ANAPC1Q9H1A4 1944 aa0.8□□□□□ -2.28
LSM6-205ENST00000507449 IGKV2D-26A0A0A0MRZ7 120 aa0.8□□□□□ -2.28
LSM6-205ENST00000507449 C7orf71A4D174 169 aa0.8□□□□□ -2.28
LSM6-205ENST00000507449 ERP29P30040 261 aaKnown RBP0.8□□□□□ -2.28
LSM6-205ENST00000507449 HOXA6P31267 233 aa0.8□□□□□ -2.28
LSM6-205ENST00000507449 PIGPP57054 158 aa0.8□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms