RNA–Protein interactions for RNA: ENST00000506927.1

CLDND1-213, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 520 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-213ENST00000506927 C5orf17Q8NAS9 161 aa4.76□□□□□ -1.65
CLDND1-213ENST00000506927 ZNF114Q8NC26 417 aa4.76□□□□□ -1.65
CLDND1-213ENST00000506927 ST6GALNAC3Q8NDV1 305 aa4.76□□□□□ -1.65
CLDND1-213ENST00000506927 NUP37Q8NFH4 326 aa4.76□□□□□ -1.65
CLDND1-213ENST00000506927 MBD3L2Q8NHZ7 208 aaPredicted RBP4.76□□□□□ -1.65
CLDND1-213ENST00000506927 TMEM167AQ8TBQ9 72 aa4.76□□□□□ -1.65
CLDND1-213ENST00000506927 DPF1Q92782 380 aa4.76□□□□□ -1.65
CLDND1-213ENST00000506927 RAX2Q96IS3 184 aa4.76□□□□□ -1.65
CLDND1-213ENST00000506927 IGF2BP2-AS1Q96M15 143 aa4.76□□□□□ -1.65
CLDND1-213ENST00000506927 HARBI1Q96MB7 349 aa4.76□□□□□ -1.65
CLDND1-213ENST00000506927 TRGV9Q99603 122 aa4.76□□□□□ -1.65
CLDND1-213ENST00000506927 RNF5Q99942 180 aa4.76□□□□□ -1.65
CLDND1-213ENST00000506927 ATG101Q9BSB4 218 aa4.76□□□□□ -1.65
CLDND1-213ENST00000506927 NDUFA4L2Q9NRX3 87 aa4.76□□□□□ -1.65
CLDND1-213ENST00000506927 TNFRSF19Q9NS68 423 aa4.76□□□□□ -1.65
CLDND1-213ENST00000506927 AURKAIP1Q9NWT8 199 aaPredicted RBP4.76□□□□□ -1.65
CLDND1-213ENST00000506927 FOXJ2Q9P0K8 574 aa4.76□□□□□ -1.65
CLDND1-213ENST00000506927 WASHC3Q9Y3C0 194 aa4.76□□□□□ -1.65
CLDND1-213ENST00000506927 KLF12Q9Y4X4 402 aa4.76□□□□□ -1.65
CLDND1-213ENST00000506927 SLC25A15Q9Y619 301 aa4.76□□□□□ -1.65
CLDND1-213ENST00000506927 CHD9Q3L8U1 2897 aa4.76□□□□□ -1.65
CLDND1-213ENST00000506927 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.75□□□□□ -1.65
CLDND1-213ENST00000506927 IGHV2-26A0A0B4J1V2 119 aa4.75□□□□□ -1.65
CLDND1-213ENST00000506927 BMPR1BO00238 502 aa4.75□□□□□ -1.65
CLDND1-213ENST00000506927 CRXO43186 299 aaPredicted RBP4.75□□□□□ -1.65
CLDND1-213ENST00000506927 NDUFB3O43676 98 aa4.75□□□□□ -1.65
CLDND1-213ENST00000506927 FOXH1O75593 365 aa4.75□□□□□ -1.65
CLDND1-213ENST00000506927 TOMM40O96008 361 aa4.75□□□□□ -1.65
CLDND1-213ENST00000506927 HLA-DRB1P01911 266 aa4.75□□□□□ -1.65
CLDND1-213ENST00000506927 SLC25A5P05141 298 aaKnown RBP4.75□□□□□ -1.65
CLDND1-213ENST00000506927 C3orf79P0CE67 100 aa4.75□□□□□ -1.65
CLDND1-213ENST00000506927 RNASE2P10153 161 aaKnown RBP4.75□□□□□ -1.65
CLDND1-213ENST00000506927 NTF3P20783 257 aa4.75□□□□□ -1.65
CLDND1-213ENST00000506927 TSPOP30536 169 aa4.75□□□□□ -1.65
CLDND1-213ENST00000506927 CTRLP40313 264 aa4.75□□□□□ -1.65
CLDND1-213ENST00000506927 CSN1S1P47710 185 aa4.75□□□□□ -1.65
CLDND1-213ENST00000506927 RPS16P62249 146 aaKnown RBP4.75□□□□□ -1.65
CLDND1-213ENST00000506927 UBE2V1Q13404 147 aa4.75□□□□□ -1.65
CLDND1-213ENST00000506927 C17orf58Q2M2W7 97 aa4.75□□□□□ -1.65
CLDND1-213ENST00000506927 ALKBH6Q3KRA9 238 aa4.75□□□□□ -1.65
CLDND1-213ENST00000506927 C19orf54Q5BKX5 351 aa4.75□□□□□ -1.65
CLDND1-213ENST00000506927 MRPL54Q6P161 138 aaKnown RBP4.75□□□□□ -1.65
CLDND1-213ENST00000506927 TMEM108Q6UXF1 575 aa4.75□□□□□ -1.65
CLDND1-213ENST00000506927 ZNF788Q6ZQV5 615 aa4.75□□□□□ -1.65
CLDND1-213ENST00000506927 Q6ZR03 302 aa4.75□□□□□ -1.65
CLDND1-213ENST00000506927 SMIM15Q7Z3B0 74 aa4.75□□□□□ -1.65
CLDND1-213ENST00000506927 DOLPP1Q86YN1 238 aa4.75□□□□□ -1.65
CLDND1-213ENST00000506927 C11orf42Q8N5U0 333 aa4.75□□□□□ -1.65
CLDND1-213ENST00000506927 TEX45Q8NA69 505 aa4.75□□□□□ -1.65
CLDND1-213ENST00000506927 OR8B3Q8NGG8 313 aa4.75□□□□□ -1.65
CLDND1-213ENST00000506927 C18orf32Q8TCD1 76 aa4.75□□□□□ -1.65
CLDND1-213ENST00000506927 AP1S3Q96PC3 154 aa4.75□□□□□ -1.65
CLDND1-213ENST00000506927 OR8B2Q96RD0 313 aa4.75□□□□□ -1.65
CLDND1-213ENST00000506927 ARRDC1-AS1Q9H2J1 176 aa4.75□□□□□ -1.65
CLDND1-213ENST00000506927 RPP21Q9H633 154 aaKnown RBP4.75□□□□□ -1.65
CLDND1-213ENST00000506927 ASCL3Q9NQ33 180 aa4.75□□□□□ -1.65
CLDND1-213ENST00000506927 OTORQ9NRC9 128 aa4.75□□□□□ -1.65
CLDND1-213ENST00000506927 EPDR1Q9UM22 224 aa4.75□□□□□ -1.65
CLDND1-213ENST00000506927 TRAV30A0A087WSZ9 112 aa4.74□□□□□ -1.65
CLDND1-213ENST00000506927 PGPEP1LA6NFU8 196 aa4.74□□□□□ -1.65
CLDND1-213ENST00000506927 H0YJW9 148 aa4.74□□□□□ -1.65
CLDND1-213ENST00000506927 M0R1B8 84 aa4.74□□□□□ -1.65
CLDND1-213ENST00000506927 SPRY3O43610 288 aa4.74□□□□□ -1.65
CLDND1-213ENST00000506927 AGFG2O95081 481 aa4.74□□□□□ -1.65
CLDND1-213ENST00000506927 LEPROTL1O95214 131 aa4.74□□□□□ -1.65
CLDND1-213ENST00000506927 GYPEP15421 78 aa4.74□□□□□ -1.65
CLDND1-213ENST00000506927 ZNF134P52741 427 aa4.74□□□□□ -1.65
CLDND1-213ENST00000506927 PLP1P60201 277 aa4.74□□□□□ -1.65
CLDND1-213ENST00000506927 ESPL1Q14674 2120 aa4.74□□□□□ -1.65
CLDND1-213ENST00000506927 SAPCD1Q5SSQ6 148 aa4.74□□□□□ -1.65
CLDND1-213ENST00000506927 HES3Q5TGS1 186 aa4.74□□□□□ -1.65
CLDND1-213ENST00000506927 IGFL4Q6B9Z1 124 aa4.74□□□□□ -1.65
CLDND1-213ENST00000506927 RNASEKQ6P5S7 137 aaKnown RBP4.74□□□□□ -1.65
CLDND1-213ENST00000506927 SLC25A34Q6PIV7 304 aa4.74□□□□□ -1.65
CLDND1-213ENST00000506927 LINC00305Q7Z4B0 112 aa4.74□□□□□ -1.65
CLDND1-213ENST00000506927 ZNF329Q86UD4 541 aa4.74□□□□□ -1.65
CLDND1-213ENST00000506927 VKORC1L1Q8N0U8 176 aa4.74□□□□□ -1.65
CLDND1-213ENST00000506927 TPRX1Q8N7U7 411 aa4.74□□□□□ -1.65
CLDND1-213ENST00000506927 ZNRF1Q8ND25 227 aa4.74□□□□□ -1.65
CLDND1-213ENST00000506927 NUP35Q8NFH5 326 aa4.74□□□□□ -1.65
CLDND1-213ENST00000506927 OR4C5Q8NGB2 326 aa4.74□□□□□ -1.65
CLDND1-213ENST00000506927 C8orf46Q8TAG6 207 aa4.74□□□□□ -1.65
CLDND1-213ENST00000506927 ALKBH7Q9BT30 221 aaPredicted RBP4.74□□□□□ -1.65
CLDND1-213ENST00000506927 SLC25A2Q9BXI2 301 aa4.74□□□□□ -1.65
CLDND1-213ENST00000506927 RNASE7Q9H1E1 156 aaKnown RBP4.74□□□□□ -1.65
CLDND1-213ENST00000506927 ZNF355PQ9NSJ1 428 aa4.74□□□□□ -1.65
CLDND1-213ENST00000506927 TMEM14CQ9P0S9 112 aa4.74□□□□□ -1.65
CLDND1-213ENST00000506927 COX11Q9Y6N1 276 aa4.74□□□□□ -1.65
CLDND1-213ENST00000506927 PPIAL4EA0A075B759 164 aa4.73□□□□□ -1.65
CLDND1-213ENST00000506927 TRAV3A0A0B4J244 114 aa4.73□□□□□ -1.65
CLDND1-213ENST00000506927 A6NDN8 102 aa4.73□□□□□ -1.65
CLDND1-213ENST00000506927 HIGD1CA8MV81 97 aa4.73□□□□□ -1.65
CLDND1-213ENST00000506927 GGTLC3B5MD39 225 aa4.73□□□□□ -1.65
CLDND1-213ENST00000506927 PPIAL4DF5H284 164 aa4.73□□□□□ -1.65
CLDND1-213ENST00000506927 K7EP13 123 aa4.73□□□□□ -1.65
CLDND1-213ENST00000506927 NUPR1O60356 82 aa4.73□□□□□ -1.65
CLDND1-213ENST00000506927 PROP1O75360 226 aa4.73□□□□□ -1.65
CLDND1-213ENST00000506927 RBP4P02753 201 aa4.73□□□□□ -1.65
CLDND1-213ENST00000506927 NBEAP1P0C6P0 100 aa4.73□□□□□ -1.65
CLDND1-213ENST00000506927 SP9P0CG40 484 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms