RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 TRAV2A0A0B4J234 112 aa6.48□□□□□ -1.37
PDGFC-205ENST00000506880 MPTX1A8MV57 137 aa6.48□□□□□ -1.37
PDGFC-205ENST00000506880 FAM25EA8MYX2 175 aa6.48□□□□□ -1.37
PDGFC-205ENST00000506880 F8W735 103 aaPredicted RBP6.48□□□□□ -1.37
PDGFC-205ENST00000506880 GOSR2O14653 212 aa6.48□□□□□ -1.37
PDGFC-205ENST00000506880 SSSCA1O60232 199 aa6.48□□□□□ -1.37
PDGFC-205ENST00000506880 TOMM40O96008 361 aa6.48□□□□□ -1.37
PDGFC-205ENST00000506880 IGHV3-11P01762 117 aa6.48□□□□□ -1.37
PDGFC-205ENST00000506880 PRH1P02810 166 aa6.48□□□□□ -1.37
PDGFC-205ENST00000506880 IGLC1P0CG04 106 aa6.48□□□□□ -1.37
PDGFC-205ENST00000506880 OR10J1P30954 320 aa6.48□□□□□ -1.37
PDGFC-205ENST00000506880 GPR183P32249 361 aa6.48□□□□□ -1.37
PDGFC-205ENST00000506880 SULT1A1P50225 295 aa6.48□□□□□ -1.37
PDGFC-205ENST00000506880 VWC2Q2TAL6 325 aa6.48□□□□□ -1.37
PDGFC-205ENST00000506880 SPANXN5Q5MJ07 72 aa6.48□□□□□ -1.37
PDGFC-205ENST00000506880 LCN12Q6JVE5 192 aa6.48□□□□□ -1.37
PDGFC-205ENST00000506880 Q8WTZ3 238 aa6.48□□□□□ -1.37
PDGFC-205ENST00000506880 PPP1R1CQ8WVI7 109 aa6.48□□□□□ -1.37
PDGFC-205ENST00000506880 RBMXL1Q96E39 390 aaKnown RBP6.48□□□□□ -1.37
PDGFC-205ENST00000506880 PARD6GQ9BYG4 376 aaPredicted RBP6.48□□□□□ -1.37
PDGFC-205ENST00000506880 C11orf1Q9H5F2 150 aa6.48□□□□□ -1.37
PDGFC-205ENST00000506880 FNDC4Q9H6D8 234 aaPredicted RBP6.48□□□□□ -1.37
PDGFC-205ENST00000506880 SEPSECSQ9HD40 501 aaKnown RBP6.48□□□□□ -1.37
PDGFC-205ENST00000506880 OR2T8A6NH00 312 aa6.47□□□□□ -1.37
PDGFC-205ENST00000506880 SEC14L6B5MCN3 397 aa6.47□□□□□ -1.37
PDGFC-205ENST00000506880 DFFBO76075 338 aa6.47□□□□□ -1.37
PDGFC-205ENST00000506880 MPC2O95563 127 aa6.47□□□□□ -1.37
PDGFC-205ENST00000506880 IGLV1-51P01701 117 aa6.47□□□□□ -1.37
PDGFC-205ENST00000506880 MEOX2P50222 304 aa6.47□□□□□ -1.37
PDGFC-205ENST00000506880 BCAP31P51572 246 aa6.47□□□□□ -1.37
PDGFC-205ENST00000506880 AP2S1P53680 142 aaPredicted RBP6.47□□□□□ -1.37
PDGFC-205ENST00000506880 PAX9P55771 341 aa6.47□□□□□ -1.37
PDGFC-205ENST00000506880 H2BFSP57053 126 aa6.47□□□□□ -1.37
PDGFC-205ENST00000506880 PLP1P60201 277 aa6.47□□□□□ -1.37
PDGFC-205ENST00000506880 RAB32Q13637 225 aa6.47□□□□□ -1.37
PDGFC-205ENST00000506880 GAMTQ14353 236 aa6.47□□□□□ -1.37
PDGFC-205ENST00000506880 C1orf194Q5T5A4 169 aa6.47□□□□□ -1.37
PDGFC-205ENST00000506880 LAMTOR1Q6IAA8 161 aa6.47□□□□□ -1.37
PDGFC-205ENST00000506880 TEPPQ6URK8 271 aa6.47□□□□□ -1.37
PDGFC-205ENST00000506880 OR51G1Q8NGK1 321 aa6.47□□□□□ -1.37
PDGFC-205ENST00000506880 THAP6Q8TBB0 222 aa6.47□□□□□ -1.37
PDGFC-205ENST00000506880 TMEM170AQ8WVE7 144 aa6.47□□□□□ -1.37
PDGFC-205ENST00000506880 DLX4Q92988 240 aaPredicted RBP6.47□□□□□ -1.37
PDGFC-205ENST00000506880 GRAMD2BQ96HH9 432 aa6.47□□□□□ -1.37
PDGFC-205ENST00000506880 GPR82Q96P67 336 aa6.47□□□□□ -1.37
PDGFC-205ENST00000506880 ZC4H2Q9NQZ6 224 aa6.47□□□□□ -1.37
PDGFC-205ENST00000506880 FBXL17Q9UF56 701 aa6.47□□□□□ -1.37
PDGFC-205ENST00000506880 ANKRD34BA5PLL1 514 aa6.46□□□□□ -1.38
PDGFC-205ENST00000506880 C2orf70A6NJV1 201 aa6.46□□□□□ -1.38
PDGFC-205ENST00000506880 PMS2P5A8MQ11 134 aa6.46□□□□□ -1.38
PDGFC-205ENST00000506880 SCGB1D2O95969 90 aa6.46□□□□□ -1.38
PDGFC-205ENST00000506880 IGKV1-17P01599 117 aa6.46□□□□□ -1.38
PDGFC-205ENST00000506880 RD3LP0DJH9 198 aa6.46□□□□□ -1.38
PDGFC-205ENST00000506880 IAPPP10997 89 aa6.46□□□□□ -1.38
PDGFC-205ENST00000506880 CRYBB3P26998 211 aa6.46□□□□□ -1.38
PDGFC-205ENST00000506880 ADMP35318 185 aa6.46□□□□□ -1.38
PDGFC-205ENST00000506880 RND2P52198 227 aa6.46□□□□□ -1.38
PDGFC-205ENST00000506880 SYNJ2BPP57105 145 aa6.46□□□□□ -1.38
PDGFC-205ENST00000506880 DEFB136Q30KP8 78 aa6.46□□□□□ -1.38
PDGFC-205ENST00000506880 SPINK9Q5DT21 86 aa6.46□□□□□ -1.38
PDGFC-205ENST00000506880 ZNF546Q86UE3 836 aa6.46□□□□□ -1.38
PDGFC-205ENST00000506880 TMEM252Q8N6L7 170 aa6.46□□□□□ -1.38
PDGFC-205ENST00000506880 UBAC2Q8NBM4 344 aa6.46□□□□□ -1.38
PDGFC-205ENST00000506880 BPIFCQ8NFQ6 507 aa6.46□□□□□ -1.38
PDGFC-205ENST00000506880 METTL26Q96S19 204 aa6.46□□□□□ -1.38
PDGFC-205ENST00000506880 TMEM147Q9BVK8 224 aa6.46□□□□□ -1.38
PDGFC-205ENST00000506880 MAGT1Q9H0U3 335 aa6.46□□□□□ -1.38
PDGFC-205ENST00000506880 ELOA3CA0A087WX78 387 aaPredicted RBP6.45□□□□□ -1.38
PDGFC-205ENST00000506880 TRAV14DV4A0A0A6YYC5 116 aa6.45□□□□□ -1.38
PDGFC-205ENST00000506880 ZFP92A6NM28 416 aa6.45□□□□□ -1.38
PDGFC-205ENST00000506880 CCSO14618 274 aa6.45□□□□□ -1.38
PDGFC-205ENST00000506880 SPNP16150 400 aa6.45□□□□□ -1.38
PDGFC-205ENST00000506880 CBLN1P23435 193 aa6.45□□□□□ -1.38
PDGFC-205ENST00000506880 NPPCP23582 126 aa6.45□□□□□ -1.38
PDGFC-205ENST00000506880 CAV2P51636 162 aa6.45□□□□□ -1.38
PDGFC-205ENST00000506880 SLURP1P55000 103 aa6.45□□□□□ -1.38
PDGFC-205ENST00000506880 S100A10P60903 97 aa6.45□□□□□ -1.38
PDGFC-205ENST00000506880 ZNF266Q14584 549 aa6.45□□□□□ -1.38
PDGFC-205ENST00000506880 C11orf87Q6NUJ2 197 aa6.45□□□□□ -1.38
PDGFC-205ENST00000506880 C18orf65Q6ZTR6 163 aa6.45□□□□□ -1.38
PDGFC-205ENST00000506880 NPIPB3Q92617 1050 aa6.45□□□□□ -1.38
PDGFC-205ENST00000506880 AQP10Q96PS8 301 aa6.45□□□□□ -1.38
PDGFC-205ENST00000506880 OR5B12Q96R08 314 aa6.45□□□□□ -1.38
PDGFC-205ENST00000506880 SPAG8Q99932 426 aaPredicted RBP6.45□□□□□ -1.38
PDGFC-205ENST00000506880 VSIRQ9H7M9 311 aa6.45□□□□□ -1.38
PDGFC-205ENST00000506880 UQCC1Q9NVA1 299 aa6.45□□□□□ -1.38
PDGFC-205ENST00000506880 LSM5Q9Y4Y9 91 aaKnown RBP6.45□□□□□ -1.38
PDGFC-205ENST00000506880 LSM4Q9Y4Z0 139 aaKnown RBP6.45□□□□□ -1.38
PDGFC-205ENST00000506880 WI2-2373I1.2A0A1W2PRP0 233 aa6.44□□□□□ -1.38
PDGFC-205ENST00000506880 TMEM213A2RRL7 107 aa6.44□□□□□ -1.38
PDGFC-205ENST00000506880 HELTA6NFD8 242 aa6.44□□□□□ -1.38
PDGFC-205ENST00000506880 TAAR5O14804 337 aa6.44□□□□□ -1.38
PDGFC-205ENST00000506880 TSPAN4O14817 238 aa6.44□□□□□ -1.38
PDGFC-205ENST00000506880 SAP30O75446 220 aa6.44□□□□□ -1.38
PDGFC-205ENST00000506880 TRBV12-3P01733 135 aa6.44□□□□□ -1.38
PDGFC-205ENST00000506880 CSN3P07498 182 aa6.44□□□□□ -1.38
PDGFC-205ENST00000506880 METTL15P1P0C7V9 234 aa6.44□□□□□ -1.38
PDGFC-205ENST00000506880 FOLR2P14207 255 aa6.44□□□□□ -1.38
PDGFC-205ENST00000506880 PAFAH1B2P68402 229 aa6.44□□□□□ -1.38
PDGFC-205ENST00000506880 AKR1C1Q04828 323 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms