RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 A0A0B4J2A0 478 aa6.7□□□□□ -1.34
PDLIM5-209ENST00000506632 UBE2CO00762 179 aa6.7□□□□□ -1.34
PDLIM5-209ENST00000506632 IGLC1P0CG04 106 aa6.7□□□□□ -1.34
PDLIM5-209ENST00000506632 SULT1A3P0DMM9 295 aa6.7□□□□□ -1.34
PDLIM5-209ENST00000506632 SULT1A4P0DMN0 295 aa6.7□□□□□ -1.34
PDLIM5-209ENST00000506632 CRYBB3P26998 211 aa6.7□□□□□ -1.34
PDLIM5-209ENST00000506632 BMI1P35226 326 aa6.7□□□□□ -1.34
PDLIM5-209ENST00000506632 APOC4P55056 127 aa6.7□□□□□ -1.34
PDLIM5-209ENST00000506632 TCF24Q7RTU0 167 aa6.7□□□□□ -1.34
PDLIM5-209ENST00000506632 CCDC190Q86UF4 302 aa6.7□□□□□ -1.34
PDLIM5-209ENST00000506632 SLC24A4Q8NFF2 622 aa6.7□□□□□ -1.34
PDLIM5-209ENST00000506632 IL17DQ8TAD2 202 aa6.7□□□□□ -1.34
PDLIM5-209ENST00000506632 RNASEH2CQ8TDP1 164 aaKnown RBP6.7□□□□□ -1.34
PDLIM5-209ENST00000506632 DEDD2Q8WXF8 326 aa6.7□□□□□ -1.34
PDLIM5-209ENST00000506632 HEYLQ9NQ87 328 aaPredicted RBP6.7□□□□□ -1.34
PDLIM5-209ENST00000506632 MCUBQ9NWR8 336 aa6.7□□□□□ -1.34
PDLIM5-209ENST00000506632 HSPB7Q9UBY9 170 aa6.7□□□□□ -1.34
PDLIM5-209ENST00000506632 CACFD1Q9UGQ2 172 aa6.7□□□□□ -1.34
PDLIM5-209ENST00000506632 SHPKQ9UHJ6 478 aa6.7□□□□□ -1.34
PDLIM5-209ENST00000506632 TRAV30A0A087WSZ9 112 aa6.69□□□□□ -1.34
PDLIM5-209ENST00000506632 TRAV2A0A0B4J234 112 aa6.69□□□□□ -1.34
PDLIM5-209ENST00000506632 RPS10-NUDT3A0A1W2PQS6 291 aa6.69□□□□□ -1.34
PDLIM5-209ENST00000506632 CEBPZOSA8MTT3 80 aa6.69□□□□□ -1.34
PDLIM5-209ENST00000506632 ZNF701M0R085 212 aaPredicted RBP6.69□□□□□ -1.34
PDLIM5-209ENST00000506632 DFFBO76075 338 aa6.69□□□□□ -1.34
PDLIM5-209ENST00000506632 SLC25A4P12235 298 aa6.69□□□□□ -1.34
PDLIM5-209ENST00000506632 AKR1C4P17516 323 aa6.69□□□□□ -1.34
PDLIM5-209ENST00000506632 FAUP35544 74 aaKnown RBP6.69□□□□□ -1.34
PDLIM5-209ENST00000506632 CCR6P51684 374 aa6.69□□□□□ -1.34
PDLIM5-209ENST00000506632 CMC4P56277 68 aaPredicted RBP6.69□□□□□ -1.34
PDLIM5-209ENST00000506632 AP3S2P59780 193 aa6.69□□□□□ -1.34
PDLIM5-209ENST00000506632 TNFRSF9Q07011 255 aa6.69□□□□□ -1.34
PDLIM5-209ENST00000506632 ZNF124Q15973 351 aa6.69□□□□□ -1.34
PDLIM5-209ENST00000506632 DEFB135Q30KP9 77 aa6.69□□□□□ -1.34
PDLIM5-209ENST00000506632 TIGITQ495A1 244 aa6.69□□□□□ -1.34
PDLIM5-209ENST00000506632 PRSS54Q6PEW0 395 aa6.69□□□□□ -1.34
PDLIM5-209ENST00000506632 LYZL2Q7Z4W2 148 aa6.69□□□□□ -1.34
PDLIM5-209ENST00000506632 APRG1Q8IVJ8 170 aa6.69□□□□□ -1.34
PDLIM5-209ENST00000506632 TOMM5Q8N4H5 51 aa6.69□□□□□ -1.34
PDLIM5-209ENST00000506632 RNF183Q96D59 192 aa6.69□□□□□ -1.34
PDLIM5-209ENST00000506632 MAP6D1Q9H9H5 199 aa6.69□□□□□ -1.34
PDLIM5-209ENST00000506632 U3KQE9 123 aa6.69□□□□□ -1.34
PDLIM5-209ENST00000506632 IGKV3-7A0A075B6H7 116 aa6.68□□□□□ -1.34
PDLIM5-209ENST00000506632 DUXBA0A1W2PPF3 345 aa6.68□□□□□ -1.34
PDLIM5-209ENST00000506632 SPRY2O43597 315 aa6.68□□□□□ -1.34
PDLIM5-209ENST00000506632 PITX3O75364 302 aa6.68□□□□□ -1.34
PDLIM5-209ENST00000506632 SCGB2A1O75556 95 aa6.68□□□□□ -1.34
PDLIM5-209ENST00000506632 NXPH3O95157 252 aa6.68□□□□□ -1.34
PDLIM5-209ENST00000506632 RPL35AP18077 110 aaKnown RBP6.68□□□□□ -1.34
PDLIM5-209ENST00000506632 NPPCP23582 126 aa6.68□□□□□ -1.34
PDLIM5-209ENST00000506632 NPY1RP25929 384 aa6.68□□□□□ -1.34
PDLIM5-209ENST00000506632 TFPI2P48307 235 aa6.68□□□□□ -1.34
PDLIM5-209ENST00000506632 RND2P52198 227 aa6.68□□□□□ -1.34
PDLIM5-209ENST00000506632 YPEL3P61236 119 aaPredicted RBP6.68□□□□□ -1.34
PDLIM5-209ENST00000506632 PAFAH1B2P68402 229 aa6.68□□□□□ -1.34
PDLIM5-209ENST00000506632 SRPXP78539 464 aa6.68□□□□□ -1.34
PDLIM5-209ENST00000506632 SMCO1Q147U7 214 aa6.68□□□□□ -1.34
PDLIM5-209ENST00000506632 PYDC2Q56P42 97 aa6.68□□□□□ -1.34
PDLIM5-209ENST00000506632 TMEM128Q5BJH2 165 aa6.68□□□□□ -1.34
PDLIM5-209ENST00000506632 LGI3Q8N145 548 aa6.68□□□□□ -1.34
PDLIM5-209ENST00000506632 GBGT1Q8N5D6 347 aa6.68□□□□□ -1.34
PDLIM5-209ENST00000506632 STPG3Q8N7X2 389 aa6.68□□□□□ -1.34
PDLIM5-209ENST00000506632 LRTM2Q8N967 370 aa6.68□□□□□ -1.34
PDLIM5-209ENST00000506632 OR1S2Q8NGQ3 325 aa6.68□□□□□ -1.34
PDLIM5-209ENST00000506632 MS4A6AQ9H2W1 248 aa6.68□□□□□ -1.34
PDLIM5-209ENST00000506632 TMEM231Q9H6L2 316 aa6.68□□□□□ -1.34
PDLIM5-209ENST00000506632 PIGBOS1A0A0B4J2F0 54 aa6.67□□□□□ -1.34
PDLIM5-209ENST00000506632 IGHV3-66A0A0C4DH42 116 aa6.67□□□□□ -1.34
PDLIM5-209ENST00000506632 A0A1W2PS18 150 aa6.67□□□□□ -1.34
PDLIM5-209ENST00000506632 CCDC160A6NGH7 325 aa6.67□□□□□ -1.34
PDLIM5-209ENST00000506632 ANXA3P12429 323 aa6.67□□□□□ -1.34
PDLIM5-209ENST00000506632 OR10J1P30954 320 aa6.67□□□□□ -1.34
PDLIM5-209ENST00000506632 S100A5P33763 92 aa6.67□□□□□ -1.34
PDLIM5-209ENST00000506632 P2RY1P47900 373 aa6.67□□□□□ -1.34
PDLIM5-209ENST00000506632 EWSR1Q01844 656 aaKnown RBP eCLIP6.67□□□□□ -1.34
PDLIM5-209ENST00000506632 ETFRF1Q6IPR1 90 aa6.67□□□□□ -1.34
PDLIM5-209ENST00000506632 LYG2Q86SG7 212 aa6.67□□□□□ -1.34
PDLIM5-209ENST00000506632 NOXA1Q86UR1 476 aa6.67□□□□□ -1.34
PDLIM5-209ENST00000506632 FAM24BQ8N5W8 94 aa6.67□□□□□ -1.34
PDLIM5-209ENST00000506632 DTD1Q8TEA8 209 aa6.67□□□□□ -1.34
PDLIM5-209ENST00000506632 METTL26Q96S19 204 aa6.67□□□□□ -1.34
PDLIM5-209ENST00000506632 SLC25A21Q9BQT8 299 aaPredicted RBP6.67□□□□□ -1.34
PDLIM5-209ENST00000506632 SRRQ9GZT4 340 aa6.67□□□□□ -1.34
PDLIM5-209ENST00000506632 RBKSQ9H477 322 aa6.67□□□□□ -1.34
PDLIM5-209ENST00000506632 U3KQ87 197 aa6.67□□□□□ -1.34
PDLIM5-209ENST00000506632 A0A0J9YWU9 116 aa6.66□□□□□ -1.34
PDLIM5-209ENST00000506632 K7EQG2 157 aa6.66□□□□□ -1.34
PDLIM5-209ENST00000506632 IFNA10P01566 189 aa6.66□□□□□ -1.34
PDLIM5-209ENST00000506632 SLC25A6P12236 298 aa6.66□□□□□ -1.34
PDLIM5-209ENST00000506632 ATP5IP56385 69 aaPredicted RBP6.66□□□□□ -1.34
PDLIM5-209ENST00000506632 DEFB131AP59861 70 aa6.66□□□□□ -1.34
PDLIM5-209ENST00000506632 RBMS2Q15434 407 aaKnown RBP6.66□□□□□ -1.34
PDLIM5-209ENST00000506632 USF2Q15853 346 aaPredicted RBP6.66□□□□□ -1.34
PDLIM5-209ENST00000506632 TMED4Q7Z7H5 227 aa6.66□□□□□ -1.34
PDLIM5-209ENST00000506632 DCANP1Q8TF63 244 aa6.66□□□□□ -1.34
PDLIM5-209ENST00000506632 Q8WTZ3 238 aa6.66□□□□□ -1.34
PDLIM5-209ENST00000506632 GLMPQ8WWB7 406 aa6.66□□□□□ -1.34
PDLIM5-209ENST00000506632 NPIPB3Q92617 1050 aa6.66□□□□□ -1.34
PDLIM5-209ENST00000506632 GRAMD2BQ96HH9 432 aa6.66□□□□□ -1.34
PDLIM5-209ENST00000506632 CSTL1Q9H114 145 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms