RNA–Protein interactions for RNA: ENST00000506630.1

TCOF1-209, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 897 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-209ENST00000506630 PUS1Q9Y606 427 aaKnown RBP eCLIP9.87□□□□□ -0.83
TCOF1-209ENST00000506630 TRAV30A0A087WSZ9 112 aa9.86□□□□□ -0.83
TCOF1-209ENST00000506630 IGHV3-49A0A0A0MS15 119 aa9.86□□□□□ -0.83
TCOF1-209ENST00000506630 ZNF785A8K8V0 405 aa9.86□□□□□ -0.83
TCOF1-209ENST00000506630 K7EMT4 169 aa9.86□□□□□ -0.83
TCOF1-209ENST00000506630 WRBO00258 174 aa9.86□□□□□ -0.83
TCOF1-209ENST00000506630 SYNGR2O43760 224 aa9.86□□□□□ -0.83
TCOF1-209ENST00000506630 SCGB1D2O95969 90 aa9.86□□□□□ -0.83
TCOF1-209ENST00000506630 FRMD6-AS1P0C7T7 363 aa9.86□□□□□ -0.83
TCOF1-209ENST00000506630 IGHV4-30-4P0DP06 118 aa9.86□□□□□ -0.83
TCOF1-209ENST00000506630 RAB11AP62491 216 aa9.86□□□□□ -0.83
TCOF1-209ENST00000506630 TIGITQ495A1 244 aa9.86□□□□□ -0.83
TCOF1-209ENST00000506630 TOMM20LQ6UXN7 152 aa9.86□□□□□ -0.83
TCOF1-209ENST00000506630 SBSPONQ8IVN8 264 aa9.86□□□□□ -0.83
TCOF1-209ENST00000506630 Q8N1Y9 231 aa9.86□□□□□ -0.83
TCOF1-209ENST00000506630 OR1S2Q8NGQ3 325 aa9.86□□□□□ -0.83
TCOF1-209ENST00000506630 ACY3Q96HD9 319 aa9.86□□□□□ -0.83
TCOF1-209ENST00000506630 OR10C1Q96KK4 312 aa9.86□□□□□ -0.83
TCOF1-209ENST00000506630 CIB3Q96Q77 187 aaPredicted RBP9.86□□□□□ -0.83
TCOF1-209ENST00000506630 ZMAT4Q9H898 229 aa9.86□□□□□ -0.83
TCOF1-209ENST00000506630 TRAV14DV4A0A0A6YYC5 116 aa9.85□□□□□ -0.83
TCOF1-209ENST00000506630 IGHV7-4-1A0A0J9YVY3 117 aa9.85□□□□□ -0.83
TCOF1-209ENST00000506630 OR10J1P30954 320 aa9.85□□□□□ -0.83
TCOF1-209ENST00000506630 NKX2-1P43699 371 aaPredicted RBP9.85□□□□□ -0.83
TCOF1-209ENST00000506630 ATP5IP56385 69 aaPredicted RBP9.85□□□□□ -0.83
TCOF1-209ENST00000506630 RPP30P78346 268 aaKnown RBP9.85□□□□□ -0.83
TCOF1-209ENST00000506630 IFITM3Q01628 133 aa9.85□□□□□ -0.83
TCOF1-209ENST00000506630 IAH1Q2TAA2 248 aaPredicted RBP9.85□□□□□ -0.83
TCOF1-209ENST00000506630 TMEM116Q8NCL8 245 aa9.85□□□□□ -0.83
TCOF1-209ENST00000506630 OR4D5Q8NGN0 318 aa9.85□□□□□ -0.83
TCOF1-209ENST00000506630 ZNF431Q8TF32 576 aaPredicted RBP9.85□□□□□ -0.83
TCOF1-209ENST00000506630 NPIPB3Q92617 1050 aa9.85□□□□□ -0.83
TCOF1-209ENST00000506630 SLC35E1Q96K37 410 aa9.85□□□□□ -0.83
TCOF1-209ENST00000506630 NEURL2Q9BR09 285 aa9.85□□□□□ -0.83
TCOF1-209ENST00000506630 ZFAND3Q9H8U3 227 aa9.85□□□□□ -0.83
TCOF1-209ENST00000506630 DNAH7Q8WXX0 4024 aa9.84□□□□□ -0.83
TCOF1-209ENST00000506630 IGHV3OR16-13A0A075B7E8 117 aa9.84□□□□□ -0.83
TCOF1-209ENST00000506630 IGHV3-74A0A0B4J1X5 117 aa9.84□□□□□ -0.83
TCOF1-209ENST00000506630 TRAV25A0A0B4J276 109 aa9.84□□□□□ -0.83
TCOF1-209ENST00000506630 FAM25EA8MYX2 175 aa9.84□□□□□ -0.83
TCOF1-209ENST00000506630 H3BP45 60 aa9.84□□□□□ -0.83
TCOF1-209ENST00000506630 CCSO14618 274 aa9.84□□□□□ -0.83
TCOF1-209ENST00000506630 SSSCA1O60232 199 aa9.84□□□□□ -0.83
TCOF1-209ENST00000506630 IGKV1-17P01599 117 aa9.84□□□□□ -0.83
TCOF1-209ENST00000506630 CD7P09564 240 aa9.84□□□□□ -0.83
TCOF1-209ENST00000506630 IGLC1P0CG04 106 aa9.84□□□□□ -0.83
TCOF1-209ENST00000506630 POLR2GP62487 172 aaKnown RBP eCLIP9.84□□□□□ -0.83
TCOF1-209ENST00000506630 SPANXN5Q5MJ07 72 aa9.84□□□□□ -0.83
TCOF1-209ENST00000506630 ZFAND6Q6FIF0 208 aa9.84□□□□□ -0.83
TCOF1-209ENST00000506630 LAMTOR1Q6IAA8 161 aa9.84□□□□□ -0.83
TCOF1-209ENST00000506630 RHPN1-AS1Q9BWJ2 59 aa9.84□□□□□ -0.83
TCOF1-209ENST00000506630 TUBA4BQ9H853 241 aa9.84□□□□□ -0.83
TCOF1-209ENST00000506630 SMPXQ9UHP9 88 aa9.84□□□□□ -0.83
TCOF1-209ENST00000506630 CHEK1O14757 476 aa9.83□□□□□ -0.84
TCOF1-209ENST00000506630 BMI1P35226 326 aa9.83□□□□□ -0.84
TCOF1-209ENST00000506630 DEFA1P59665 94 aa9.83□□□□□ -0.84
TCOF1-209ENST00000506630 DEFA3P59666 94 aa9.83□□□□□ -0.84
TCOF1-209ENST00000506630 ID3Q02535 119 aa9.83□□□□□ -0.84
TCOF1-209ENST00000506630 LINC01559Q495D7 138 aa9.83□□□□□ -0.84
TCOF1-209ENST00000506630 C12orf45Q8N5I9 185 aaPredicted RBP9.83□□□□□ -0.84
TCOF1-209ENST00000506630 ZBTB8BQ8NAP8 495 aaPredicted RBP9.83□□□□□ -0.84
TCOF1-209ENST00000506630 CITED4Q96RK1 184 aa9.83□□□□□ -0.84
TCOF1-209ENST00000506630 METTL26Q96S19 204 aa9.83□□□□□ -0.84
TCOF1-209ENST00000506630 RNF2Q99496 336 aa9.83□□□□□ -0.84
TCOF1-209ENST00000506630 WFDC10AQ9H1F0 79 aa9.83□□□□□ -0.84
TCOF1-209ENST00000506630 GSKIPQ9P0R6 139 aa9.83□□□□□ -0.84
TCOF1-209ENST00000506630 TSPAN4O14817 238 aa9.82□□□□□ -0.84
TCOF1-209ENST00000506630 GPX4P36969 197 aaPredicted RBP9.82□□□□□ -0.84
TCOF1-209ENST00000506630 Q8WTZ3 238 aa9.82□□□□□ -0.84
TCOF1-209ENST00000506630 ST8SIA2Q92186 375 aa9.82□□□□□ -0.84
TCOF1-209ENST00000506630 SPAG8Q99932 426 aaPredicted RBP9.82□□□□□ -0.84
TCOF1-209ENST00000506630 SRD5A3Q9H8P0 318 aa9.82□□□□□ -0.84
TCOF1-209ENST00000506630 PSENENQ9NZ42 101 aa9.82□□□□□ -0.84
TCOF1-209ENST00000506630 STRAPQ9Y3F4 350 aaKnown RBP9.82□□□□□ -0.84
TCOF1-209ENST00000506630 IGKV3-7A0A075B6H7 116 aa9.81□□□□□ -0.84
TCOF1-209ENST00000506630 IGHV3-66A0A0C4DH42 116 aa9.81□□□□□ -0.84
TCOF1-209ENST00000506630 C5orf51A6NDU8 294 aa9.81□□□□□ -0.84
TCOF1-209ENST00000506630 ZFP92A6NM28 416 aa9.81□□□□□ -0.84
TCOF1-209ENST00000506630 A8MZ25 164 aa9.81□□□□□ -0.84
TCOF1-209ENST00000506630 OR11H12B2RN74 326 aa9.81□□□□□ -0.84
TCOF1-209ENST00000506630 APOHP02749 345 aaPredicted RBP9.81□□□□□ -0.84
TCOF1-209ENST00000506630 IL5P05113 134 aa9.81□□□□□ -0.84
TCOF1-209ENST00000506630 YPEL3P61236 119 aaPredicted RBP9.81□□□□□ -0.84
TCOF1-209ENST00000506630 GAMTQ14353 236 aa9.81□□□□□ -0.84
TCOF1-209ENST00000506630 NRARPQ7Z6K4 114 aa9.81□□□□□ -0.84
TCOF1-209ENST00000506630 DEFB125Q8N687 156 aa9.81□□□□□ -0.84
TCOF1-209ENST00000506630 NARS2Q96I59 477 aaKnown RBP9.81□□□□□ -0.84
TCOF1-209ENST00000506630 TMEM231Q9H6L2 316 aa9.81□□□□□ -0.84
TCOF1-209ENST00000506630 C19orf73Q9NVV2 129 aa9.81□□□□□ -0.84
TCOF1-209ENST00000506630 OR4C46A6NHA9 309 aa9.8□□□□□ -0.84
TCOF1-209ENST00000506630 TOMM40O96008 361 aa9.8□□□□□ -0.84
TCOF1-209ENST00000506630 IL4P05112 153 aa9.8□□□□□ -0.84
TCOF1-209ENST00000506630 NPPCP23582 126 aa9.8□□□□□ -0.84
TCOF1-209ENST00000506630 TFPI2P48307 235 aa9.8□□□□□ -0.84
TCOF1-209ENST00000506630 TCF24Q7RTU0 167 aa9.8□□□□□ -0.84
TCOF1-209ENST00000506630 VSIRQ9H7M9 311 aa9.8□□□□□ -0.84
TCOF1-209ENST00000506630 GPN1Q9HCN4 374 aaPredicted RBP9.8□□□□□ -0.84
TCOF1-209ENST00000506630 UBQLN2Q9UHD9 624 aa9.8□□□□□ -0.84
TCOF1-209ENST00000506630 RCL1Q9Y2P8 373 aaKnown RBP9.8□□□□□ -0.84
TCOF1-209ENST00000506630 LSM5Q9Y4Y9 91 aaKnown RBP9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms