RNA–Protein interactions for RNA: ENST00000505020.1

CDH9-202, Transcript of cadherin 9, humanhuman

TSL 2

Gene CDH9, Length 1,836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-202ENST00000505020 HLA-DRB4X5D2U9 266 aa5.31□□□□□ -1.56
CDH9-202ENST00000505020 N4BP2Q86UW6 1770 aaPredicted RBP5.31□□□□□ -1.56
CDH9-202ENST00000505020 SHANK2Q9UPX8 1470 aa5.31□□□□□ -1.56
CDH9-202ENST00000505020 NLRC5Q86WI3 1866 aa5.31□□□□□ -1.56
CDH9-202ENST00000505020 ATG2BQ96BY7 2078 aa5.31□□□□□ -1.56
CDH9-202ENST00000505020 NMBP08949 121 aa5.3□□□□□ -1.56
CDH9-202ENST00000505020 HIST1H2BOP23527 126 aa5.3□□□□□ -1.56
CDH9-202ENST00000505020 HIST1H2BBP33778 126 aa5.3□□□□□ -1.56
CDH9-202ENST00000505020 HIST1H2BDP58876 126 aa5.3□□□□□ -1.56
CDH9-202ENST00000505020 LINC00310P59036 64 aa5.3□□□□□ -1.56
CDH9-202ENST00000505020 HIST1H2BCP62807 126 aa5.3□□□□□ -1.56
CDH9-202ENST00000505020 GNB2P62879 340 aa5.3□□□□□ -1.56
CDH9-202ENST00000505020 HIST2H2BEQ16778 126 aa5.3□□□□□ -1.56
CDH9-202ENST00000505020 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.3□□□□□ -1.56
CDH9-202ENST00000505020 LAIR2Q6ISS4 152 aa5.3□□□□□ -1.56
CDH9-202ENST00000505020 TEN1Q86WV5 123 aa5.3□□□□□ -1.56
CDH9-202ENST00000505020 PCP2Q8IVA1 136 aa5.3□□□□□ -1.56
CDH9-202ENST00000505020 OR5H2Q8NGV7 314 aa5.3□□□□□ -1.56
CDH9-202ENST00000505020 HIST1H2BHQ93079 126 aa5.3□□□□□ -1.56
CDH9-202ENST00000505020 HIST1H2BNQ99877 126 aa5.3□□□□□ -1.56
CDH9-202ENST00000505020 HIST1H2BMQ99879 126 aa5.3□□□□□ -1.56
CDH9-202ENST00000505020 PYGO2Q9BRQ0 406 aa5.3□□□□□ -1.56
CDH9-202ENST00000505020 PARLQ9H300 379 aa5.3□□□□□ -1.56
CDH9-202ENST00000505020 PLEKHF2Q9H8W4 249 aa5.3□□□□□ -1.56
CDH9-202ENST00000505020 AGLP35573 1532 aa5.3□□□□□ -1.56
CDH9-202ENST00000505020 IGKV6-21A0A0C4DH24 114 aa5.3□□□□□ -1.56
CDH9-202ENST00000505020 MUC21A0A0G2JKD1 596 aa5.3□□□□□ -1.56
CDH9-202ENST00000505020 TRBV27A0A0K0K1C4 114 aa5.3□□□□□ -1.56
CDH9-202ENST00000505020 OOSP1A8MZH6 123 aa5.3□□□□□ -1.56
CDH9-202ENST00000505020 C16orf97H3BN30 126 aa5.3□□□□□ -1.56
CDH9-202ENST00000505020 CXCL5P42830 114 aa5.3□□□□□ -1.56
CDH9-202ENST00000505020 ZNF136P52737 540 aa5.3□□□□□ -1.56
CDH9-202ENST00000505020 LINC00205P59089 165 aa5.3□□□□□ -1.56
CDH9-202ENST00000505020 H2AFVQ71UI9 128 aa5.3□□□□□ -1.56
CDH9-202ENST00000505020 ARPINQ7Z6K5 226 aa5.3□□□□□ -1.56
CDH9-202ENST00000505020 SLC25A42Q86VD7 318 aa5.3□□□□□ -1.56
CDH9-202ENST00000505020 OR10P1Q8NGE3 313 aa5.3□□□□□ -1.56
CDH9-202ENST00000505020 FAM57AQ8TBR7 257 aa5.3□□□□□ -1.56
CDH9-202ENST00000505020 KRTAP4-5Q9BYR2 181 aa5.3□□□□□ -1.56
CDH9-202ENST00000505020 SND1-IT1Q9HBX3 110 aa5.3□□□□□ -1.56
CDH9-202ENST00000505020 DPM3Q9P2X0 92 aa5.3□□□□□ -1.56
CDH9-202ENST00000505020 ZNF638Q14966 1978 aaKnown RBP5.29□□□□□ -1.56
CDH9-202ENST00000505020 CHD4Q14839 1912 aa5.29□□□□□ -1.56
CDH9-202ENST00000505020 MYH13Q9UKX3 1938 aa5.29□□□□□ -1.56
CDH9-202ENST00000505020 KIAA1671Q9BY89 1806 aa5.29□□□□□ -1.56
CDH9-202ENST00000505020 IGHV1-45A0A0A0MS14 117 aa5.29□□□□□ -1.56
CDH9-202ENST00000505020 TRAV19A0A0A6YYK7 116 aa5.29□□□□□ -1.56
CDH9-202ENST00000505020 C3orf85A0A1B0GTC6 90 aa5.29□□□□□ -1.56
CDH9-202ENST00000505020 BUB1B-PAK6H3BSN5 160 aa5.29□□□□□ -1.56
CDH9-202ENST00000505020 APOC4-APOC2K7ER74 178 aa5.29□□□□□ -1.56
CDH9-202ENST00000505020 NTN3O00634 580 aaPredicted RBP5.29□□□□□ -1.56
CDH9-202ENST00000505020 APOC2P02655 101 aa5.29□□□□□ -1.56
CDH9-202ENST00000505020 CRYGAP11844 174 aa5.29□□□□□ -1.56
CDH9-202ENST00000505020 HERVK_113P61574 105 aa5.29□□□□□ -1.56
CDH9-202ENST00000505020 EGFEM1PQ0D2K5 195 aa5.29□□□□□ -1.56
CDH9-202ENST00000505020 AADACL3Q5VUY0 350 aa5.29□□□□□ -1.56
CDH9-202ENST00000505020 TMEM91Q6ZNR0 172 aa5.29□□□□□ -1.56
CDH9-202ENST00000505020 PHF5AQ7RTV0 110 aaKnown RBP5.29□□□□□ -1.56
CDH9-202ENST00000505020 OR8A1Q8NGG7 326 aa5.29□□□□□ -1.56
CDH9-202ENST00000505020 C2orf15Q8WU43 125 aaKnown RBP5.29□□□□□ -1.56
CDH9-202ENST00000505020 HIST1H2BLQ99880 126 aa5.29□□□□□ -1.56
CDH9-202ENST00000505020 KDM5CP41229 1560 aa5.29□□□□□ -1.56
CDH9-202ENST00000505020 ARAP2Q8WZ64 1704 aa5.29□□□□□ -1.56
CDH9-202ENST00000505020 ABCC3O15438 1527 aa5.29□□□□□ -1.56
CDH9-202ENST00000505020 ADAMTS20P59510 1910 aa5.28□□□□□ -1.56
CDH9-202ENST00000505020 CHD3Q12873 2000 aaKnown RBP5.28□□□□□ -1.56
CDH9-202ENST00000505020 SUPT6HQ7KZ85 1726 aaKnown RBP5.28□□□□□ -1.56
CDH9-202ENST00000505020 HFM1A2PYH4 1435 aa5.28□□□□□ -1.56
CDH9-202ENST00000505020 K7EP34 96 aa5.28□□□□□ -1.56
CDH9-202ENST00000505020 PEX7O00628 323 aa5.28□□□□□ -1.56
CDH9-202ENST00000505020 BGLAPP02818 100 aa5.28□□□□□ -1.56
CDH9-202ENST00000505020 SEC11BP0C7V7 166 aa5.28□□□□□ -1.56
CDH9-202ENST00000505020 CRISP3P54108 245 aa5.28□□□□□ -1.56
CDH9-202ENST00000505020 SNRPD3P62318 126 aaKnown RBP5.28□□□□□ -1.56
CDH9-202ENST00000505020 NUP37Q8NFH4 326 aa5.28□□□□□ -1.56
CDH9-202ENST00000505020 RNASE6Q93091 150 aaKnown RBP5.28□□□□□ -1.56
CDH9-202ENST00000505020 RBMXL1Q96E39 390 aaKnown RBP5.28□□□□□ -1.56
CDH9-202ENST00000505020 UQCR10Q9UDW1 63 aa5.28□□□□□ -1.56
CDH9-202ENST00000505020 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.28□□□□□ -1.56
CDH9-202ENST00000505020 MYH7BA7E2Y1 1941 aa5.28□□□□□ -1.56
CDH9-202ENST00000505020 NUP205Q92621 2012 aa5.28□□□□□ -1.56
CDH9-202ENST00000505020 ANKRD31Q8N7Z5 1873 aa5.28□□□□□ -1.56
CDH9-202ENST00000505020 RTEL1-TNFRSF6BF6WH68 1400 aa5.28□□□□□ -1.56
CDH9-202ENST00000505020 TRBV20-1A0A075B6N2 111 aa5.27□□□□□ -1.57
CDH9-202ENST00000505020 SYNGR2O43760 224 aa5.27□□□□□ -1.57
CDH9-202ENST00000505020 DUSP14O95147 198 aaKnown RBP5.27□□□□□ -1.57
CDH9-202ENST00000505020 ELK1P19419 428 aa5.27□□□□□ -1.57
CDH9-202ENST00000505020 Q0VG73 95 aa5.27□□□□□ -1.57
CDH9-202ENST00000505020 FHL1Q13642 323 aa5.27□□□□□ -1.57
CDH9-202ENST00000505020 EBI3Q14213 229 aa5.27□□□□□ -1.57
CDH9-202ENST00000505020 LGALS9BQ3B8N2 356 aa5.27□□□□□ -1.57
CDH9-202ENST00000505020 SCXQ7RTU7 201 aa5.27□□□□□ -1.57
CDH9-202ENST00000505020 NFE4Q86UQ8 179 aa5.27□□□□□ -1.57
CDH9-202ENST00000505020 METTL27Q8N6F8 245 aaPredicted RBP5.27□□□□□ -1.57
CDH9-202ENST00000505020 TSLPQ969D9 159 aa5.27□□□□□ -1.57
CDH9-202ENST00000505020 FAM104AQ969W3 186 aa5.27□□□□□ -1.57
CDH9-202ENST00000505020 RAB37Q96AX2 223 aa5.27□□□□□ -1.57
CDH9-202ENST00000505020 PGLYRP2Q96PD5 576 aa5.27□□□□□ -1.57
CDH9-202ENST00000505020 KRTAP4-11Q9BYQ6 195 aa5.27□□□□□ -1.57
CDH9-202ENST00000505020 NUP210LQ5VU65 1888 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms