RNA–Protein interactions for RNA: ENST00000504841.6

NPIPB3-203, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

APPRIS P1 TSL 1 (best)

Gene NPIPB3, Length 1,254 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-203ENST00000504841 LOC102723971A0A1B0GUV8 181 aa4.88□□□□□ -1.63
NPIPB3-203ENST00000504841 ZNF705FA8MVS1 300 aaPredicted RBP4.88□□□□□ -1.63
NPIPB3-203ENST00000504841 CORTO00230 105 aa4.88□□□□□ -1.63
NPIPB3-203ENST00000504841 HNRNPCP07910 306 aaKnown RBP eCLIP4.88□□□□□ -1.63
NPIPB3-203ENST00000504841 ZNF705DP0CH99 300 aaPredicted RBP4.88□□□□□ -1.63
NPIPB3-203ENST00000504841 ZNF705BP0CI00 300 aaPredicted RBP4.88□□□□□ -1.63
NPIPB3-203ENST00000504841 HLA-DRB4P13762 266 aa4.88□□□□□ -1.63
NPIPB3-203ENST00000504841 S100GP29377 79 aa4.88□□□□□ -1.63
NPIPB3-203ENST00000504841 TAS2R46P59540 309 aa4.88□□□□□ -1.63
NPIPB3-203ENST00000504841 DAD1P61803 113 aa4.88□□□□□ -1.63
NPIPB3-203ENST00000504841 GDF5OSQ5U4N7 250 aa4.88□□□□□ -1.63
NPIPB3-203ENST00000504841 OR6F1Q8NGZ6 308 aa4.88□□□□□ -1.63
NPIPB3-203ENST00000504841 GLMPQ8WWB7 406 aa4.88□□□□□ -1.63
NPIPB3-203ENST00000504841 SEC22AQ96IW7 307 aa4.88□□□□□ -1.63
NPIPB3-203ENST00000504841 LINC00052Q96N35 136 aa4.88□□□□□ -1.63
NPIPB3-203ENST00000504841 NEU1Q99519 415 aa4.88□□□□□ -1.63
NPIPB3-203ENST00000504841 C7orf50Q9BRJ6 194 aaKnown RBP4.88□□□□□ -1.63
NPIPB3-203ENST00000504841 PDCD10Q9BUL8 212 aa4.88□□□□□ -1.63
NPIPB3-203ENST00000504841 FNDC4Q9H6D8 234 aaPredicted RBP4.88□□□□□ -1.63
NPIPB3-203ENST00000504841 ENY2Q9NPA8 101 aa4.88□□□□□ -1.63
NPIPB3-203ENST00000504841 SSR3Q9UNL2 185 aa4.88□□□□□ -1.63
NPIPB3-203ENST00000504841 HLA-DRB4X5D2U9 266 aa4.88□□□□□ -1.63
NPIPB3-203ENST00000504841 RPS10-NUDT3A0A1W2PQS6 291 aa4.87□□□□□ -1.63
NPIPB3-203ENST00000504841 SMIM9A6NGZ8 99 aa4.87□□□□□ -1.63
NPIPB3-203ENST00000504841 NUDT3O95989 172 aa4.87□□□□□ -1.63
NPIPB3-203ENST00000504841 IGKV1-39P01597 117 aa4.87□□□□□ -1.63
NPIPB3-203ENST00000504841 IGKV1-17P01599 117 aa4.87□□□□□ -1.63
NPIPB3-203ENST00000504841 HBE1P02100 147 aa4.87□□□□□ -1.63
NPIPB3-203ENST00000504841 IGKV1D-39P04432 117 aa4.87□□□□□ -1.63
NPIPB3-203ENST00000504841 RNASE2P10153 161 aaKnown RBP4.87□□□□□ -1.63
NPIPB3-203ENST00000504841 HLA-DMAP28067 261 aa4.87□□□□□ -1.63
NPIPB3-203ENST00000504841 SDC2P34741 201 aa4.87□□□□□ -1.63
NPIPB3-203ENST00000504841 HRH1P35367 487 aa4.87□□□□□ -1.63
NPIPB3-203ENST00000504841 ETV6P41212 452 aa4.87□□□□□ -1.63
NPIPB3-203ENST00000504841 AKR1C2P52895 323 aa4.87□□□□□ -1.63
NPIPB3-203ENST00000504841 AP2S1P53680 142 aaPredicted RBP4.87□□□□□ -1.63
NPIPB3-203ENST00000504841 C16orf54Q6UWD8 224 aa4.87□□□□□ -1.63
NPIPB3-203ENST00000504841 DHRS11Q6UWP2 260 aa4.87□□□□□ -1.63
NPIPB3-203ENST00000504841 GSG1LQ6UXU4 331 aa4.87□□□□□ -1.63
NPIPB3-203ENST00000504841 SPARTQ8N0X7 666 aa4.87□□□□□ -1.63
NPIPB3-203ENST00000504841 CADM3Q8N126 398 aa4.87□□□□□ -1.63
NPIPB3-203ENST00000504841 OR4B1Q8NGF8 309 aa4.87□□□□□ -1.63
NPIPB3-203ENST00000504841 OR4X1Q8NH49 305 aa4.87□□□□□ -1.63
NPIPB3-203ENST00000504841 SLC35B3Q9H1N7 401 aa4.87□□□□□ -1.63
NPIPB3-203ENST00000504841 NRN1Q9NPD7 142 aa4.87□□□□□ -1.63
NPIPB3-203ENST00000504841 GOLT1BQ9Y3E0 138 aa4.87□□□□□ -1.63
NPIPB3-203ENST00000504841 A0A0A6YYH2 397 aa4.86□□□□□ -1.63
NPIPB3-203ENST00000504841 LOC100506127A0A0U1RQW1 187 aa4.86□□□□□ -1.63
NPIPB3-203ENST00000504841 A6NJ64 397 aa4.86□□□□□ -1.63
NPIPB3-203ENST00000504841 EPM2AB3EWF7 344 aa4.86□□□□□ -1.63
NPIPB3-203ENST00000504841 F5H768 121 aa4.86□□□□□ -1.63
NPIPB3-203ENST00000504841 TMEM127O75204 238 aa4.86□□□□□ -1.63
NPIPB3-203ENST00000504841 IGKV1-5P01602 117 aa4.86□□□□□ -1.63
NPIPB3-203ENST00000504841 IL4P05112 153 aa4.86□□□□□ -1.63
NPIPB3-203ENST00000504841 RND2P52198 227 aa4.86□□□□□ -1.63
NPIPB3-203ENST00000504841 SUB1P53999 127 aaKnown RBP eCLIP4.86□□□□□ -1.63
NPIPB3-203ENST00000504841 TAS2R20P59543 309 aa4.86□□□□□ -1.63
NPIPB3-203ENST00000504841 TSPAN5P62079 268 aa4.86□□□□□ -1.63
NPIPB3-203ENST00000504841 DHODHQ02127 395 aa4.86□□□□□ -1.63
NPIPB3-203ENST00000504841 USF2Q15853 346 aaPredicted RBP4.86□□□□□ -1.63
NPIPB3-203ENST00000504841 SIGLEC15Q6ZMC9 328 aa4.86□□□□□ -1.63
NPIPB3-203ENST00000504841 C15orf53Q8NAA6 179 aa4.86□□□□□ -1.63
NPIPB3-203ENST00000504841 ZNRF2Q8NHG8 242 aa4.86□□□□□ -1.63
NPIPB3-203ENST00000504841 COQ8AQ8NI60 647 aa4.86□□□□□ -1.63
NPIPB3-203ENST00000504841 RNASE11Q8TAA1 199 aaKnown RBP4.86□□□□□ -1.63
NPIPB3-203ENST00000504841 Q8WTZ3 238 aa4.86□□□□□ -1.63
NPIPB3-203ENST00000504841 HSPG2P98160 4391 aa4.86□□□□□ -1.63
NPIPB3-203ENST00000504841 DNAH17Q9UFH2 4485 aa4.85□□□□□ -1.63
NPIPB3-203ENST00000504841 TRAV30A0A087WSZ9 112 aa4.85□□□□□ -1.63
NPIPB3-203ENST00000504841 A0A087WXM4 84 aa4.85□□□□□ -1.63
NPIPB3-203ENST00000504841 TNFAIP8O95379 198 aa4.85□□□□□ -1.63
NPIPB3-203ENST00000504841 IGLC1P0CG04 106 aa4.85□□□□□ -1.63
NPIPB3-203ENST00000504841 INAFM2P0DMQ5 153 aa4.85□□□□□ -1.63
NPIPB3-203ENST00000504841 DEFB130BP0DP73 79 aa4.85□□□□□ -1.63
NPIPB3-203ENST00000504841 DEFB130AP0DP74 79 aa4.85□□□□□ -1.63
NPIPB3-203ENST00000504841 PGAM2P15259 253 aa4.85□□□□□ -1.63
NPIPB3-203ENST00000504841 PI3P19957 117 aa4.85□□□□□ -1.63
NPIPB3-203ENST00000504841 OR10J1P30954 320 aa4.85□□□□□ -1.63
NPIPB3-203ENST00000504841 NKX2-1P43699 371 aaPredicted RBP4.85□□□□□ -1.63
NPIPB3-203ENST00000504841 RORCP51449 518 aa4.85□□□□□ -1.63
NPIPB3-203ENST00000504841 SCAND1P57086 179 aa4.85□□□□□ -1.63
NPIPB3-203ENST00000504841 FAM3BP58499 235 aaPredicted RBP4.85□□□□□ -1.63
NPIPB3-203ENST00000504841 DLK1P80370 383 aa4.85□□□□□ -1.63
NPIPB3-203ENST00000504841 RRN3P1Q2M238 152 aa4.85□□□□□ -1.63
NPIPB3-203ENST00000504841 TRIM16LQ309B1 348 aa4.85□□□□□ -1.63
NPIPB3-203ENST00000504841 TMEM69Q5SWH9 247 aa4.85□□□□□ -1.63
NPIPB3-203ENST00000504841 LPCAT3Q6P1A2 487 aa4.85□□□□□ -1.63
NPIPB3-203ENST00000504841 ZNF709Q8N972 641 aa4.85□□□□□ -1.63
NPIPB3-203ENST00000504841 OR1S2Q8NGQ3 325 aa4.85□□□□□ -1.63
NPIPB3-203ENST00000504841 TMEM208Q9BTX3 173 aa4.85□□□□□ -1.63
NPIPB3-203ENST00000504841 PBDC1Q9BVG4 233 aa4.85□□□□□ -1.63
NPIPB3-203ENST00000504841 MAGT1Q9H0U3 335 aa4.85□□□□□ -1.63
NPIPB3-203ENST00000504841 SAV1Q9H4B6 383 aaPredicted RBP4.85□□□□□ -1.63
NPIPB3-203ENST00000504841 VCX3AQ9NNX9 186 aa4.85□□□□□ -1.63
NPIPB3-203ENST00000504841 U3KQE9 123 aa4.85□□□□□ -1.63
NPIPB3-203ENST00000504841 A0A0B4J293 547 aa4.84□□□□□ -1.63
NPIPB3-203ENST00000504841 F6UB75 175 aa4.84□□□□□ -1.63
NPIPB3-203ENST00000504841 M0QYG6 137 aa4.84□□□□□ -1.63
NPIPB3-203ENST00000504841 GSTZ1O43708 216 aaPredicted RBP4.84□□□□□ -1.63
NPIPB3-203ENST00000504841 FUSP35637 526 aaKnown RBP eCLIP4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms