RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 GAS8-AS1O95177 125 aa8.44□□□□□ -1.06
LSM6-204ENST00000504181 C1QBP02746 253 aa8.44□□□□□ -1.06
LSM6-204ENST00000504181 MT1HL1P0DM35 61 aa8.44□□□□□ -1.06
LSM6-204ENST00000504181 PTHLHP12272 177 aa8.44□□□□□ -1.06
LSM6-204ENST00000504181 FCGR2CP31995 323 aa8.44□□□□□ -1.06
LSM6-204ENST00000504181 LPAR6P43657 344 aa8.44□□□□□ -1.06
LSM6-204ENST00000504181 PAX9P55771 341 aa8.44□□□□□ -1.06
LSM6-204ENST00000504181 FXYD4P59646 89 aa8.44□□□□□ -1.06
LSM6-204ENST00000504181 SPINK9Q5DT21 86 aa8.44□□□□□ -1.06
LSM6-204ENST00000504181 EBLN2Q6P2I7 272 aa8.44□□□□□ -1.06
LSM6-204ENST00000504181 CADM3Q8N126 398 aa8.44□□□□□ -1.06
LSM6-204ENST00000504181 NUDCD2Q8WVJ2 157 aa8.44□□□□□ -1.06
LSM6-204ENST00000504181 ANXA10Q9UJ72 324 aa8.44□□□□□ -1.06
LSM6-204ENST00000504181 A0A096LPF7 62 aa8.43□□□□□ -1.06
LSM6-204ENST00000504181 A0A0J9YX75 114 aa8.43□□□□□ -1.06
LSM6-204ENST00000504181 M0R2Z0 102 aa8.43□□□□□ -1.06
LSM6-204ENST00000504181 INSP01308 110 aa8.43□□□□□ -1.06
LSM6-204ENST00000504181 IGKV1-17P01599 117 aa8.43□□□□□ -1.06
LSM6-204ENST00000504181 ID1P41134 155 aa8.43□□□□□ -1.06
LSM6-204ENST00000504181 ERHP84090 104 aaKnown RBP8.43□□□□□ -1.06
LSM6-204ENST00000504181 PRCDQ00LT1 54 aa8.43□□□□□ -1.06
LSM6-204ENST00000504181 KIR3DS1Q14943 382 aa8.43□□□□□ -1.06
LSM6-204ENST00000504181 SPATA31B1PQ5VZV4 182 aa8.43□□□□□ -1.06
LSM6-204ENST00000504181 Q6ZSA8 131 aa8.43□□□□□ -1.06
LSM6-204ENST00000504181 OR10J6PQ8NGY7 276 aa8.43□□□□□ -1.06
LSM6-204ENST00000504181 FCAMRQ8WWV6 532 aa8.43□□□□□ -1.06
LSM6-204ENST00000504181 NOP10Q9NPE3 64 aaKnown RBP8.43□□□□□ -1.06
LSM6-204ENST00000504181 MSRB1Q9NZV6 116 aa8.43□□□□□ -1.06
LSM6-204ENST00000504181 TIMM8BQ9Y5J9 83 aaPredicted RBP8.43□□□□□ -1.06
LSM6-204ENST00000504181 ERICH4A6NGS2 130 aa8.42□□□□□ -1.06
LSM6-204ENST00000504181 H3BNG1 76 aa8.42□□□□□ -1.06
LSM6-204ENST00000504181 SCGB2A1O75556 95 aa8.42□□□□□ -1.06
LSM6-204ENST00000504181 PPYP01298 95 aa8.42□□□□□ -1.06
LSM6-204ENST00000504181 RLN1P04808 185 aa8.42□□□□□ -1.06
LSM6-204ENST00000504181 PSMB3P49720 205 aa8.42□□□□□ -1.06
LSM6-204ENST00000504181 GNGT1P63211 74 aa8.42□□□□□ -1.06
LSM6-204ENST00000504181 MLANAQ16655 118 aa8.42□□□□□ -1.06
LSM6-204ENST00000504181 SPINK13Q1W4C9 94 aa8.42□□□□□ -1.06
LSM6-204ENST00000504181 CDNFQ49AH0 187 aa8.42□□□□□ -1.06
LSM6-204ENST00000504181 AMTNQ6UX39 209 aa8.42□□□□□ -1.06
LSM6-204ENST00000504181 TMEM17Q86X19 198 aa8.42□□□□□ -1.06
LSM6-204ENST00000504181 TSPAN14Q8NG11 270 aa8.42□□□□□ -1.06
LSM6-204ENST00000504181 FAM212BQ9NTI7 297 aaPredicted RBP8.42□□□□□ -1.06
LSM6-204ENST00000504181 RS1O15537 224 aa8.41□□□□□ -1.06
LSM6-204ENST00000504181 CRXO43186 299 aaPredicted RBP8.41□□□□□ -1.06
LSM6-204ENST00000504181 BUB3O43684 328 aa8.41□□□□□ -1.06
LSM6-204ENST00000504181 HTN1P15515 57 aa8.41□□□□□ -1.06
LSM6-204ENST00000504181 F2RP25116 425 aa8.41□□□□□ -1.06
LSM6-204ENST00000504181 ARPC4P59998 168 aa8.41□□□□□ -1.06
LSM6-204ENST00000504181 C1orf146Q5VVC0 180 aa8.41□□□□□ -1.06
LSM6-204ENST00000504181 HACD4Q5VWC8 232 aa8.41□□□□□ -1.06
LSM6-204ENST00000504181 SCXQ7RTU7 201 aa8.41□□□□□ -1.06
LSM6-204ENST00000504181 TMED4Q7Z7H5 227 aa8.41□□□□□ -1.06
LSM6-204ENST00000504181 BAP18Q8IXM2 172 aa8.41□□□□□ -1.06
LSM6-204ENST00000504181 TSC22D3Q99576 134 aa8.41□□□□□ -1.06
LSM6-204ENST00000504181 LRCOL1A6NCL2 159 aa8.4□□□□□ -1.06
LSM6-204ENST00000504181 IL4P05112 153 aa8.4□□□□□ -1.06
LSM6-204ENST00000504181 SNCAP37840 140 aa8.4□□□□□ -1.06
LSM6-204ENST00000504181 OPRK1P41145 380 aa8.4□□□□□ -1.06
LSM6-204ENST00000504181 B2MP61769 119 aa8.4□□□□□ -1.06
LSM6-204ENST00000504181 Q8N814 137 aa8.4□□□□□ -1.06
LSM6-204ENST00000504181 OR4X1Q8NH49 305 aa8.4□□□□□ -1.06
LSM6-204ENST00000504181 OR4A16Q8NH70 328 aa8.4□□□□□ -1.06
LSM6-204ENST00000504181 Q8WTZ3 238 aa8.4□□□□□ -1.06
LSM6-204ENST00000504181 PYDC1Q8WXC3 89 aa8.4□□□□□ -1.06
LSM6-204ENST00000504181 TMEM203Q969S6 136 aa8.4□□□□□ -1.06
LSM6-204ENST00000504181 GPR146Q96CH1 333 aa8.4□□□□□ -1.06
LSM6-204ENST00000504181 C16orf74Q96GX8 76 aa8.4□□□□□ -1.06
LSM6-204ENST00000504181 MED4Q9NPJ6 270 aa8.4□□□□□ -1.06
LSM6-204ENST00000504181 DOK5Q9P104 306 aa8.4□□□□□ -1.06
LSM6-204ENST00000504181 V9GY05 133 aa8.4□□□□□ -1.06
LSM6-204ENST00000504181 TRAV12-2A0A075B6T6 113 aa8.39□□□□□ -1.07
LSM6-204ENST00000504181 METTL21EPA6NDL7 271 aa8.39□□□□□ -1.07
LSM6-204ENST00000504181 TMEM235A6NFC5 223 aa8.39□□□□□ -1.07
LSM6-204ENST00000504181 A8MTW9 85 aa8.39□□□□□ -1.07
LSM6-204ENST00000504181 SOCS3O14543 225 aa8.39□□□□□ -1.07
LSM6-204ENST00000504181 PSCAO43653 123 aa8.39□□□□□ -1.07
LSM6-204ENST00000504181 GSTZ1O43708 216 aaPredicted RBP8.39□□□□□ -1.07
LSM6-204ENST00000504181 ELK1P19419 428 aa8.39□□□□□ -1.07
LSM6-204ENST00000504181 RAB6AP20340 208 aa8.39□□□□□ -1.07
LSM6-204ENST00000504181 DHODHQ02127 395 aa8.39□□□□□ -1.07
LSM6-204ENST00000504181 NANOGP1Q8N7R0 232 aa8.39□□□□□ -1.07
LSM6-204ENST00000504181 ATG5Q9H1Y0 275 aa8.39□□□□□ -1.07
LSM6-204ENST00000504181 KLK11Q9UBX7 282 aa8.39□□□□□ -1.07
LSM6-204ENST00000504181 LY96Q9Y6Y9 160 aa8.39□□□□□ -1.07
LSM6-204ENST00000504181 TRAV30A0A087WSZ9 112 aa8.38□□□□□ -1.07
LSM6-204ENST00000504181 TRAV9-2A0A087WT02 112 aa8.38□□□□□ -1.07
LSM6-204ENST00000504181 GAGE12BA1L429 117 aa8.38□□□□□ -1.07
LSM6-204ENST00000504181 CORTO00230 105 aa8.38□□□□□ -1.07
LSM6-204ENST00000504181 SSX5O60225 188 aa8.38□□□□□ -1.07
LSM6-204ENST00000504181 GAGE7O76087 117 aa8.38□□□□□ -1.07
LSM6-204ENST00000504181 GAGE12FP0CL80 117 aa8.38□□□□□ -1.07
LSM6-204ENST00000504181 GAGE12GP0CL81 117 aa8.38□□□□□ -1.07
LSM6-204ENST00000504181 GAGE12IP0CL82 117 aa8.38□□□□□ -1.07
LSM6-204ENST00000504181 RANBP1P43487 201 aa8.38□□□□□ -1.07
LSM6-204ENST00000504181 HNRNPA3P51991 378 aaKnown RBP8.38□□□□□ -1.07
LSM6-204ENST00000504181 HSPE1P61604 102 aaKnown RBP8.38□□□□□ -1.07
LSM6-204ENST00000504181 ARL6IP1Q15041 203 aa8.38□□□□□ -1.07
LSM6-204ENST00000504181 TMEM91Q6ZNR0 172 aa8.38□□□□□ -1.07
LSM6-204ENST00000504181 OR11H7Q8NGC8 314 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms