RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 IGHV3-21A0A0B4J1V1 117 aa17.38■□□□□ 0.37
PTPN13-205ENST00000502971 A0A0U1RQK1 487 aa17.38■□□□□ 0.37
PTPN13-205ENST00000502971 H3BQ15 152 aa17.38■□□□□ 0.37
PTPN13-205ENST00000502971 BPIFB3P59826 476 aa17.38■□□□□ 0.37
PTPN13-205ENST00000502971 RHEBQ15382 184 aa17.38■□□□□ 0.37
PTPN13-205ENST00000502971 J3QLI3 93 aa17.37■□□□□ 0.37
PTPN13-205ENST00000502971 K7EIM0 57 aa17.37■□□□□ 0.37
PTPN13-205ENST00000502971 EGR2P11161 476 aaPredicted RBP17.37■□□□□ 0.37
PTPN13-205ENST00000502971 PQLC2Q6ZP29 291 aa17.37■□□□□ 0.37
PTPN13-205ENST00000502971 OR4F5Q8NH21 305 aa17.37■□□□□ 0.37
PTPN13-205ENST00000502971 RBM14Q96PK6 669 aaKnown RBP17.37■□□□□ 0.37
PTPN13-205ENST00000502971 OR4F4Q96R69 305 aa17.37■□□□□ 0.37
PTPN13-205ENST00000502971 C7orf77A4D0Y5 90 aa17.36■□□□□ 0.37
PTPN13-205ENST00000502971 C11orf94C9JXX5 98 aa17.36■□□□□ 0.37
PTPN13-205ENST00000502971 COX7A2P2O60397 106 aa17.36■□□□□ 0.37
PTPN13-205ENST00000502971 CLN5O75503 358 aa17.36■□□□□ 0.37
PTPN13-205ENST00000502971 TVP23CQ96ET8 276 aa17.36■□□□□ 0.37
PTPN13-205ENST00000502971 IGLV11-55A0A075B6I3 123 aa17.35■□□□□ 0.37
PTPN13-205ENST00000502971 ELOA3CA0A087WX78 387 aaPredicted RBP17.35■□□□□ 0.37
PTPN13-205ENST00000502971 PDE6DO43924 150 aa17.35■□□□□ 0.37
PTPN13-205ENST00000502971 C8orf88P0DMB2 117 aa17.35■□□□□ 0.37
PTPN13-205ENST00000502971 C10orf113Q5VZT2 155 aa17.35■□□□□ 0.37
PTPN13-205ENST00000502971 SGMS2Q8NHU3 365 aa17.35■□□□□ 0.37
PTPN13-205ENST00000502971 PIFOQ8TCI5 191 aa17.35■□□□□ 0.37
PTPN13-205ENST00000502971 RPS10P5Q9NQ39 176 aa17.35■□□□□ 0.37
PTPN13-205ENST00000502971 TMEM167BQ9NRX6 74 aa17.35■□□□□ 0.37
PTPN13-205ENST00000502971 MOB4Q9Y3A3 225 aa17.35■□□□□ 0.37
PTPN13-205ENST00000502971 NUPL2O15504 423 aaKnown RBP17.35■□□□□ 0.37
PTPN13-205ENST00000502971 IGLC1P0CG04 106 aa17.35■□□□□ 0.37
PTPN13-205ENST00000502971 AKIRIN2Q53H80 203 aa17.35■□□□□ 0.37
PTPN13-205ENST00000502971 KLF17Q5JT82 389 aaPredicted RBP17.35■□□□□ 0.37
PTPN13-205ENST00000502971 TMEM88Q6PEY1 159 aa17.35■□□□□ 0.37
PTPN13-205ENST00000502971 C5orf56Q8N8D9 126 aa17.35■□□□□ 0.37
PTPN13-205ENST00000502971 FANCD2OSQ96PS1 177 aa17.35■□□□□ 0.37
PTPN13-205ENST00000502971 HSPB9Q9BQS6 159 aa17.35■□□□□ 0.37
PTPN13-205ENST00000502971 C20orf24Q9BUV8 137 aa17.35■□□□□ 0.37
PTPN13-205ENST00000502971 THYN1Q9P016 225 aa17.35■□□□□ 0.37
PTPN13-205ENST00000502971 ARL2-SNX15V9GYD0 113 aa17.35■□□□□ 0.37
PTPN13-205ENST00000502971 UBE2G2P60604 165 aa17.34■□□□□ 0.37
PTPN13-205ENST00000502971 Q5PR19 223 aa17.34■□□□□ 0.37
PTPN13-205ENST00000502971 CST9LP1Q5W188 147 aa17.34■□□□□ 0.37
PTPN13-205ENST00000502971 CBLN2Q8IUK8 224 aa17.34■□□□□ 0.37
PTPN13-205ENST00000502971 TMEM68Q96MH6 324 aa17.34■□□□□ 0.37
PTPN13-205ENST00000502971 SSX3Q99909 188 aa17.34■□□□□ 0.37
PTPN13-205ENST00000502971 SMCO4Q9NRQ5 59 aa17.34■□□□□ 0.37
PTPN13-205ENST00000502971 F6UZH7 168 aa17.33■□□□□ 0.37
PTPN13-205ENST00000502971 AVPP01185 164 aa17.33■□□□□ 0.37
PTPN13-205ENST00000502971 PLP1P60201 277 aa17.33■□□□□ 0.37
PTPN13-205ENST00000502971 PNRC1Q12796 327 aaPredicted RBP17.33■□□□□ 0.37
PTPN13-205ENST00000502971 PATE2Q6UY27 113 aa17.33■□□□□ 0.37
PTPN13-205ENST00000502971 TMA7Q9Y2S6 64 aaKnown RBP17.33■□□□□ 0.37
PTPN13-205ENST00000502971 ZNF727A8MUV8 499 aa17.33■□□□□ 0.36
PTPN13-205ENST00000502971 RNF223E7ERA6 249 aa17.33■□□□□ 0.36
PTPN13-205ENST00000502971 FABP1P07148 127 aa17.33■□□□□ 0.36
PTPN13-205ENST00000502971 FOXC2Q99958 501 aa17.33■□□□□ 0.36
PTPN13-205ENST00000502971 DOK5Q9P104 306 aa17.33■□□□□ 0.36
PTPN13-205ENST00000502971 ITPR2Q14571 2701 aa17.32■□□□□ 0.36
PTPN13-205ENST00000502971 HIST1H1BP16401 226 aaKnown RBP17.32■□□□□ 0.36
PTPN13-205ENST00000502971 FAM110DQ8TAY7 271 aaPredicted RBP17.32■□□□□ 0.36
PTPN13-205ENST00000502971 ZNF48Q96MX3 618 aaPredicted RBP17.32■□□□□ 0.36
PTPN13-205ENST00000502971 TRAV30A0A087WSZ9 112 aa17.31■□□□□ 0.36
PTPN13-205ENST00000502971 OR7C2O60412 319 aa17.31■□□□□ 0.36
PTPN13-205ENST00000502971 ATP5G3P48201 142 aa17.31■□□□□ 0.36
PTPN13-205ENST00000502971 KLK9Q2XQG4 91 aa17.31■□□□□ 0.36
PTPN13-205ENST00000502971 OR5T1Q8NG75 326 aa17.31■□□□□ 0.36
PTPN13-205ENST00000502971 ZNF503Q96F45 646 aa17.31■□□□□ 0.36
PTPN13-205ENST00000502971 FAM167A-AS1Q96KT0 104 aa17.31■□□□□ 0.36
PTPN13-205ENST00000502971 SLC25A2Q9BXI2 301 aa17.31■□□□□ 0.36
PTPN13-205ENST00000502971 KLK9Q9UKQ9 250 aa17.31■□□□□ 0.36
PTPN13-205ENST00000502971 VPS13CQ709C8 3753 aa17.31■□□□□ 0.36
PTPN13-205ENST00000502971 B4DEV8 164 aa17.3■□□□□ 0.36
PTPN13-205ENST00000502971 TSPAN4O14817 238 aa17.3■□□□□ 0.36
PTPN13-205ENST00000502971 ATP6V0E1O15342 81 aa17.3■□□□□ 0.36
PTPN13-205ENST00000502971 TGFAP01135 160 aa17.3■□□□□ 0.36
PTPN13-205ENST00000502971 UNQ5815/PRO19632Q6UWF5 114 aa17.3■□□□□ 0.36
PTPN13-205ENST00000502971 OR1B1Q8NGR6 318 aa17.3■□□□□ 0.36
PTPN13-205ENST00000502971 SMIM7Q9BQ49 75 aa17.3■□□□□ 0.36
PTPN13-205ENST00000502971 PARLQ9H300 379 aa17.3■□□□□ 0.36
PTPN13-205ENST00000502971 GSX1Q9H4S2 264 aaPredicted RBP17.3■□□□□ 0.36
PTPN13-205ENST00000502971 SDF2L1Q9HCN8 221 aa17.3■□□□□ 0.36
PTPN13-205ENST00000502971 ZNF355PQ9NSJ1 428 aa17.3■□□□□ 0.36
PTPN13-205ENST00000502971 YTHDF2Q9Y5A9 579 aaKnown RBP17.3■□□□□ 0.36
PTPN13-205ENST00000502971 HYPMO75409 117 aa17.3■□□□□ 0.36
PTPN13-205ENST00000502971 ORM2P19652 201 aa17.3■□□□□ 0.36
PTPN13-205ENST00000502971 MFAP4P55083 255 aa17.3■□□□□ 0.36
PTPN13-205ENST00000502971 TIGITQ495A1 244 aa17.3■□□□□ 0.36
PTPN13-205ENST00000502971 TMEM219Q86XT9 240 aa17.3■□□□□ 0.36
PTPN13-205ENST00000502971 RPUSD4Q96CM3 377 aaKnown RBP17.3■□□□□ 0.36
PTPN13-205ENST00000502971 TUBA4BQ9H853 241 aa17.3■□□□□ 0.36
PTPN13-205ENST00000502971 NAT8Q9UHE5 227 aa17.3■□□□□ 0.36
PTPN13-205ENST00000502971 IGKV1-17P01599 117 aa17.29■□□□□ 0.36
PTPN13-205ENST00000502971 IGHV4-31P0DP07 118 aa17.29■□□□□ 0.36
PTPN13-205ENST00000502971 PSG1P11464 419 aa17.29■□□□□ 0.36
PTPN13-205ENST00000502971 AKR1C3P42330 323 aa17.29■□□□□ 0.36
PTPN13-205ENST00000502971 LINC00305Q7Z4B0 112 aa17.29■□□□□ 0.36
PTPN13-205ENST00000502971 OR5AU1Q8NGC0 362 aa17.29■□□□□ 0.36
PTPN13-205ENST00000502971 TMUB1Q9BVT8 246 aa17.29■□□□□ 0.36
PTPN13-205ENST00000502971 A0A087WWC5 75 aa17.28■□□□□ 0.36
PTPN13-205ENST00000502971 TRAV5A0A0B4J249 113 aa17.28■□□□□ 0.36
PTPN13-205ENST00000502971 A6NDX4 124 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms