RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 OR1L4Q8NGR5 311 aa7.91□□□□□ -1.14
CLIP1-204ENST00000501271 FXYD5Q96DB9 178 aa7.91□□□□□ -1.14
CLIP1-204ENST00000501271 MS4A10Q96PG2 267 aa7.91□□□□□ -1.14
CLIP1-204ENST00000501271 IGHV2-26A0A0B4J1V2 119 aa7.91□□□□□ -1.14
CLIP1-204ENST00000501271 SCGB1D1O95968 90 aa7.91□□□□□ -1.14
CLIP1-204ENST00000501271 CA1P00915 261 aaPredicted RBP7.91□□□□□ -1.14
CLIP1-204ENST00000501271 CD33P20138 364 aa7.91□□□□□ -1.14
CLIP1-204ENST00000501271 LHFPL4Q7Z7J7 247 aa7.91□□□□□ -1.14
CLIP1-204ENST00000501271 MISP3Q96FF7 219 aa7.91□□□□□ -1.14
CLIP1-204ENST00000501271 NOL4LQ96MY1 436 aaPredicted RBP7.91□□□□□ -1.14
CLIP1-204ENST00000501271 GNB1LQ9BYB4 327 aa7.91□□□□□ -1.14
CLIP1-204ENST00000501271 CDC42EP3Q9UKI2 254 aa7.91□□□□□ -1.14
CLIP1-204ENST00000501271 TRBV9A0A0B4J1U6 114 aa7.9□□□□□ -1.14
CLIP1-204ENST00000501271 IGLV1-47P01700 117 aa7.9□□□□□ -1.14
CLIP1-204ENST00000501271 CD3EP07766 207 aa7.9□□□□□ -1.14
CLIP1-204ENST00000501271 FAM87AP0C7U9 286 aa7.9□□□□□ -1.14
CLIP1-204ENST00000501271 LGALS7P47929 136 aa7.9□□□□□ -1.14
CLIP1-204ENST00000501271 TNXAQ16473 311 aa7.9□□□□□ -1.14
CLIP1-204ENST00000501271 LINC00305Q7Z4B0 112 aa7.9□□□□□ -1.14
CLIP1-204ENST00000501271 AMMECR1Q9Y4X0 333 aaPredicted RBP7.9□□□□□ -1.14
CLIP1-204ENST00000501271 TRAV34A0A0B4J273 112 aa7.9□□□□□ -1.15
CLIP1-204ENST00000501271 SMIM27A0A1W2PRY6 76 aa7.9□□□□□ -1.15
CLIP1-204ENST00000501271 B9A039 149 aa7.9□□□□□ -1.15
CLIP1-204ENST00000501271 K7ENP7 123 aa7.9□□□□□ -1.15
CLIP1-204ENST00000501271 PEX7O00628 323 aa7.9□□□□□ -1.15
CLIP1-204ENST00000501271 CRYGCP07315 174 aa7.9□□□□□ -1.15
CLIP1-204ENST00000501271 CRYGBP07316 175 aa7.9□□□□□ -1.15
CLIP1-204ENST00000501271 ESDP10768 282 aa7.9□□□□□ -1.15
CLIP1-204ENST00000501271 PVRIGQ6DKI7 326 aa7.9□□□□□ -1.15
CLIP1-204ENST00000501271 ZNF841Q6ZN19 808 aa7.9□□□□□ -1.15
CLIP1-204ENST00000501271 TMEM136Q6ZRR5 245 aa7.9□□□□□ -1.15
CLIP1-204ENST00000501271 Q6ZWC4 215 aa7.9□□□□□ -1.15
CLIP1-204ENST00000501271 TEX45Q8NA69 505 aa7.9□□□□□ -1.15
CLIP1-204ENST00000501271 LINC01560Q8TB33 94 aa7.9□□□□□ -1.15
CLIP1-204ENST00000501271 FAM168AQ92567 244 aa7.9□□□□□ -1.15
CLIP1-204ENST00000501271 TNFRSF19Q9NS68 423 aa7.9□□□□□ -1.15
CLIP1-204ENST00000501271 SERTAD4Q9NUC0 356 aa7.9□□□□□ -1.15
CLIP1-204ENST00000501271 NAT8BQ9UHF3 227 aa7.9□□□□□ -1.15
CLIP1-204ENST00000501271 NAGKQ9UJ70 344 aa7.9□□□□□ -1.15
CLIP1-204ENST00000501271 RALYQ9UKM9 306 aaKnown RBP7.9□□□□□ -1.15
CLIP1-204ENST00000501271 POLR3KQ9Y2Y1 108 aaPredicted RBP7.9□□□□□ -1.15
CLIP1-204ENST00000501271 TPRP12270 2363 aaKnown RBP7.89□□□□□ -1.15
CLIP1-204ENST00000501271 IGHV3-21A0A0B4J1V1 117 aa7.89□□□□□ -1.15
CLIP1-204ENST00000501271 ORM2P19652 201 aa7.89□□□□□ -1.15
CLIP1-204ENST00000501271 RPL27AP46776 148 aaKnown RBP7.89□□□□□ -1.15
CLIP1-204ENST00000501271 TAS2R60P59551 318 aa7.89□□□□□ -1.15
CLIP1-204ENST00000501271 GNG5P63218 68 aa7.89□□□□□ -1.15
CLIP1-204ENST00000501271 RBPJQ06330 500 aa7.89□□□□□ -1.15
CLIP1-204ENST00000501271 MRPL54Q6P161 138 aaKnown RBP7.89□□□□□ -1.15
CLIP1-204ENST00000501271 VKORC1Q9BQB6 163 aa7.89□□□□□ -1.15
CLIP1-204ENST00000501271 NDUFAF3Q9BU61 184 aa7.89□□□□□ -1.15
CLIP1-204ENST00000501271 IGHV1-3A0A0C4DH29 117 aa7.89□□□□□ -1.15
CLIP1-204ENST00000501271 SIAH2O43255 324 aa7.89□□□□□ -1.15
CLIP1-204ENST00000501271 GRNP28799 593 aaKnown RBP7.89□□□□□ -1.15
CLIP1-204ENST00000501271 MYCNOSP40205 109 aa7.89□□□□□ -1.15
CLIP1-204ENST00000501271 TPPP2P59282 170 aa7.89□□□□□ -1.15
CLIP1-204ENST00000501271 Q0VG73 95 aa7.89□□□□□ -1.15
CLIP1-204ENST00000501271 KIAA1644Q3SXP7 199 aa7.89□□□□□ -1.15
CLIP1-204ENST00000501271 BAGE3Q86Y29 109 aa7.89□□□□□ -1.15
CLIP1-204ENST00000501271 BAGE2Q86Y30 109 aa7.89□□□□□ -1.15
CLIP1-204ENST00000501271 OR1B1Q8NGR6 318 aa7.89□□□□□ -1.15
CLIP1-204ENST00000501271 TNFRSF14Q92956 283 aa7.89□□□□□ -1.15
CLIP1-204ENST00000501271 SCNM1Q9BWG6 230 aa7.89□□□□□ -1.15
CLIP1-204ENST00000501271 SSBP3Q9BWW4 388 aaPredicted RBP7.89□□□□□ -1.15
CLIP1-204ENST00000501271 GNB4Q9HAV0 340 aa7.89□□□□□ -1.15
CLIP1-204ENST00000501271 SIGLEC9Q9Y336 463 aa7.89□□□□□ -1.15
CLIP1-204ENST00000501271 ABCA1O95477 2261 aa7.89□□□□□ -1.15
CLIP1-204ENST00000501271 ANKHD1Q8IWZ3 2542 aaKnown RBP7.89□□□□□ -1.15
CLIP1-204ENST00000501271 A0A1B0GV90 55 aa7.88□□□□□ -1.15
CLIP1-204ENST00000501271 BUB1B-PAK6H3BSN5 160 aa7.88□□□□□ -1.15
CLIP1-204ENST00000501271 MT-ND6P03923 174 aa7.88□□□□□ -1.15
CLIP1-204ENST00000501271 COX7A1P24310 79 aa7.88□□□□□ -1.15
CLIP1-204ENST00000501271 COMPP49747 757 aaPredicted RBP7.88□□□□□ -1.15
CLIP1-204ENST00000501271 RANP62826 216 aaKnown RBP7.88□□□□□ -1.15
CLIP1-204ENST00000501271 ETFRF1Q6IPR1 90 aa7.88□□□□□ -1.15
CLIP1-204ENST00000501271 WDR73Q6P4I2 378 aa7.88□□□□□ -1.15
CLIP1-204ENST00000501271 BLNKQ8WV28 456 aa7.88□□□□□ -1.15
CLIP1-204ENST00000501271 CLEC7AQ9BXN2 247 aa7.88□□□□□ -1.15
CLIP1-204ENST00000501271 ABCA4P78363 2273 aa7.88□□□□□ -1.15
CLIP1-204ENST00000501271 FAM90A27PA6NNH2 459 aa7.88□□□□□ -1.15
CLIP1-204ENST00000501271 TEX22C9J3V5 150 aa7.88□□□□□ -1.15
CLIP1-204ENST00000501271 AMY1AP04745 511 aa7.88□□□□□ -1.15
CLIP1-204ENST00000501271 PRRX1P54821 245 aa7.88□□□□□ -1.15
CLIP1-204ENST00000501271 CASP6P55212 293 aa7.88□□□□□ -1.15
CLIP1-204ENST00000501271 PAFAH1B2P68402 229 aa7.88□□□□□ -1.15
CLIP1-204ENST00000501271 MUC15Q8N387 334 aa7.88□□□□□ -1.15
CLIP1-204ENST00000501271 TMEM116Q8NCL8 245 aa7.88□□□□□ -1.15
CLIP1-204ENST00000501271 MBD6Q96DN6 1003 aa7.88□□□□□ -1.15
CLIP1-204ENST00000501271 PERPQ96FX8 193 aa7.88□□□□□ -1.15
CLIP1-204ENST00000501271 TRGV9Q99603 122 aa7.88□□□□□ -1.15
CLIP1-204ENST00000501271 HSPB9Q9BQS6 159 aa7.88□□□□□ -1.15
CLIP1-204ENST00000501271 GSX1Q9H4S2 264 aaPredicted RBP7.88□□□□□ -1.15
CLIP1-204ENST00000501271 INSIG2Q9Y5U4 225 aa7.88□□□□□ -1.15
CLIP1-204ENST00000501271 ARHGAP32A7KAX9 2087 aa7.87□□□□□ -1.15
CLIP1-204ENST00000501271 HRNRQ86YZ3 2850 aaPredicted RBP7.87□□□□□ -1.15
CLIP1-204ENST00000501271 KIR2DL5BA0A0G2JN68 375 aa7.87□□□□□ -1.15
CLIP1-204ENST00000501271 KIR2DL5BA0A0G2JPC4 375 aa7.87□□□□□ -1.15
CLIP1-204ENST00000501271 IZUMO1RA6ND01 250 aa7.87□□□□□ -1.15
CLIP1-204ENST00000501271 BMPR1BO00238 502 aa7.87□□□□□ -1.15
CLIP1-204ENST00000501271 CDKN1AP38936 164 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms