RNA–Protein interactions for RNA: ENST00000498814.1

CPNE1-228, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-228ENST00000498814 NPIPB3Q92617 1050 aa11.81□□□□□ -0.52
CPNE1-228ENST00000498814 MARC2Q969Z3 335 aa11.81□□□□□ -0.52
CPNE1-228ENST00000498814 ACY3Q96HD9 319 aa11.81□□□□□ -0.52
CPNE1-228ENST00000498814 SLC35E1Q96K37 410 aa11.81□□□□□ -0.52
CPNE1-228ENST00000498814 NMES1Q9C002 83 aa11.81□□□□□ -0.52
CPNE1-228ENST00000498814 C11orf1Q9H5F2 150 aa11.81□□□□□ -0.52
CPNE1-228ENST00000498814 LSM5Q9Y4Y9 91 aaKnown RBP11.81□□□□□ -0.52
CPNE1-228ENST00000498814 L7N2F9 121 aa11.8□□□□□ -0.52
CPNE1-228ENST00000498814 OR10J1P30954 320 aa11.8□□□□□ -0.52
CPNE1-228ENST00000498814 VAMP2P63027 116 aa11.8□□□□□ -0.52
CPNE1-228ENST00000498814 RAB32Q13637 225 aa11.8□□□□□ -0.52
CPNE1-228ENST00000498814 C20orf24Q9BUV8 137 aa11.8□□□□□ -0.52
CPNE1-228ENST00000498814 DAZ1Q9NQZ3 744 aaKnown RBP11.8□□□□□ -0.52
CPNE1-228ENST00000498814 TECRQ9NZ01 308 aaKnown RBP11.8□□□□□ -0.52
CPNE1-228ENST00000498814 MRPL27Q9P0M9 148 aaKnown RBP11.8□□□□□ -0.52
CPNE1-228ENST00000498814 PMS2P5A8MQ11 134 aa11.79□□□□□ -0.52
CPNE1-228ENST00000498814 YIF1AO95070 293 aa11.79□□□□□ -0.52
CPNE1-228ENST00000498814 PVALBP20472 110 aaPredicted RBP11.79□□□□□ -0.52
CPNE1-228ENST00000498814 EDN2P20800 178 aa11.79□□□□□ -0.52
CPNE1-228ENST00000498814 H2BFSP57053 126 aa11.79□□□□□ -0.52
CPNE1-228ENST00000498814 S100A10P60903 97 aa11.79□□□□□ -0.52
CPNE1-228ENST00000498814 YPEL3P61236 119 aaPredicted RBP11.79□□□□□ -0.52
CPNE1-228ENST00000498814 TIGITQ495A1 244 aa11.79□□□□□ -0.52
CPNE1-228ENST00000498814 TOMM20LQ6UXN7 152 aa11.79□□□□□ -0.52
CPNE1-228ENST00000498814 HAPLN4Q86UW8 402 aa11.79□□□□□ -0.52
CPNE1-228ENST00000498814 OR2K2Q8NGT1 345 aa11.79□□□□□ -0.52
CPNE1-228ENST00000498814 AURKAIP1Q9NWT8 199 aaPredicted RBP11.79□□□□□ -0.52
CPNE1-228ENST00000498814 MGAT4CQ9UBM8 478 aa11.79□□□□□ -0.52
CPNE1-228ENST00000498814 ZNF256Q9Y2P7 627 aaPredicted RBP11.79□□□□□ -0.52
CPNE1-228ENST00000498814 PUS1Q9Y606 427 aaKnown RBP eCLIP11.79□□□□□ -0.52
CPNE1-228ENST00000498814 PRB2P02812 416 aaPredicted RBP11.78□□□□□ -0.52
CPNE1-228ENST00000498814 METTL15P1P0C7V9 234 aa11.78□□□□□ -0.52
CPNE1-228ENST00000498814 DEFB114Q30KQ6 69 aa11.78□□□□□ -0.52
CPNE1-228ENST00000498814 OR8G2PQ6IF36 304 aa11.78□□□□□ -0.52
CPNE1-228ENST00000498814 DYNLRB2Q8TF09 96 aa11.78□□□□□ -0.52
CPNE1-228ENST00000498814 GINS3Q9BRX5 216 aa11.78□□□□□ -0.52
CPNE1-228ENST00000498814 ZFAND3Q9H8U3 227 aa11.78□□□□□ -0.52
CPNE1-228ENST00000498814 IGHV3OR16-8A0A075B7F1 116 aa11.77□□□□□ -0.53
CPNE1-228ENST00000498814 LCN12Q6JVE5 192 aa11.77□□□□□ -0.53
CPNE1-228ENST00000498814 ACOT7LQ6ZUV0 252 aa11.77□□□□□ -0.53
CPNE1-228ENST00000498814 THAP8Q8NA92 274 aa11.77□□□□□ -0.53
CPNE1-228ENST00000498814 OR10P1Q8NGE3 313 aa11.77□□□□□ -0.53
CPNE1-228ENST00000498814 Q8WTZ3 238 aa11.77□□□□□ -0.53
CPNE1-228ENST00000498814 MLXQ9UH92 298 aa11.77□□□□□ -0.53
CPNE1-228ENST00000498814 IGKV1D-37A0A075B6S9 117 aa11.76□□□□□ -0.53
CPNE1-228ENST00000498814 TRAV14DV4A0A0A6YYC5 116 aa11.76□□□□□ -0.53
CPNE1-228ENST00000498814 ZFP92A6NM28 416 aa11.76□□□□□ -0.53
CPNE1-228ENST00000498814 FNDC10F2Z333 226 aa11.76□□□□□ -0.53
CPNE1-228ENST00000498814 ZNF207O43670 478 aaKnown RBP11.76□□□□□ -0.53
CPNE1-228ENST00000498814 DEDDO75618 318 aa11.76□□□□□ -0.53
CPNE1-228ENST00000498814 CCNKO75909 580 aa11.76□□□□□ -0.53
CPNE1-228ENST00000498814 SCAF4O95104 1147 aaKnown RBP11.76□□□□□ -0.53
CPNE1-228ENST00000498814 TOMM40O96008 361 aa11.76□□□□□ -0.53
CPNE1-228ENST00000498814 RLN2P04090 185 aa11.76□□□□□ -0.53
CPNE1-228ENST00000498814 BCAP31P51572 246 aa11.76□□□□□ -0.53
CPNE1-228ENST00000498814 CAV2P51636 162 aa11.76□□□□□ -0.53
CPNE1-228ENST00000498814 DLK1P80370 383 aa11.76□□□□□ -0.53
CPNE1-228ENST00000498814 CD300EQ496F6 205 aaPredicted RBP11.76□□□□□ -0.53
CPNE1-228ENST00000498814 MED28Q9H204 178 aa11.76□□□□□ -0.53
CPNE1-228ENST00000498814 LYRM2Q9NU23 88 aaPredicted RBP11.76□□□□□ -0.53
CPNE1-228ENST00000498814 SMPXQ9UHP9 88 aa11.76□□□□□ -0.53
CPNE1-228ENST00000498814 IGKV1OR2-108A0A075B7D4 117 aa11.75□□□□□ -0.53
CPNE1-228ENST00000498814 IGHV7-4-1A0A0J9YVY3 117 aa11.75□□□□□ -0.53
CPNE1-228ENST00000498814 WI2-2373I1.2A0A1W2PRP0 233 aa11.75□□□□□ -0.53
CPNE1-228ENST00000498814 IZUMO1RA6ND01 250 aa11.75□□□□□ -0.53
CPNE1-228ENST00000498814 FAM24AA6NFZ4 105 aa11.75□□□□□ -0.53
CPNE1-228ENST00000498814 FABP1P07148 127 aa11.75□□□□□ -0.53
CPNE1-228ENST00000498814 RD3LP0DJH9 198 aa11.75□□□□□ -0.53
CPNE1-228ENST00000498814 GP9P14770 177 aa11.75□□□□□ -0.53
CPNE1-228ENST00000498814 CXCL3P19876 107 aa11.75□□□□□ -0.53
CPNE1-228ENST00000498814 TMEM144Q7Z5S9 345 aa11.75□□□□□ -0.53
CPNE1-228ENST00000498814 PPP1R1CQ8WVI7 109 aa11.75□□□□□ -0.53
CPNE1-228ENST00000498814 WDR89Q96FK6 387 aaPredicted RBP11.75□□□□□ -0.53
CPNE1-228ENST00000498814 PRR25Q96S07 402 aa11.75□□□□□ -0.53
CPNE1-228ENST00000498814 TRGV9Q99603 122 aa11.75□□□□□ -0.53
CPNE1-228ENST00000498814 GGACTQ9BVM4 153 aa11.75□□□□□ -0.53
CPNE1-228ENST00000498814 E5RGE8 158 aa11.74□□□□□ -0.53
CPNE1-228ENST00000498814 K7EIL1 84 aa11.74□□□□□ -0.53
CPNE1-228ENST00000498814 PSG1P11464 419 aa11.74□□□□□ -0.53
CPNE1-228ENST00000498814 AKR1C1Q04828 323 aa11.74□□□□□ -0.53
CPNE1-228ENST00000498814 ARL16Q0P5N6 197 aa11.74□□□□□ -0.53
CPNE1-228ENST00000498814 FCN2Q15485 313 aa11.74□□□□□ -0.53
CPNE1-228ENST00000498814 LRRC37A5PQ49AS3 106 aa11.74□□□□□ -0.53
CPNE1-228ENST00000498814 BTNL8Q6UX41 500 aa11.74□□□□□ -0.53
CPNE1-228ENST00000498814 TMEM252Q8N6L7 170 aa11.74□□□□□ -0.53
CPNE1-228ENST00000498814 OR11H7Q8NGC8 314 aa11.74□□□□□ -0.53
CPNE1-228ENST00000498814 TRAV25A0A0B4J276 109 aa11.73□□□□□ -0.53
CPNE1-228ENST00000498814 ZNF785A8K8V0 405 aa11.73□□□□□ -0.53
CPNE1-228ENST00000498814 H0YIZ8 118 aa11.73□□□□□ -0.53
CPNE1-228ENST00000498814 CHEK1O14757 476 aa11.73□□□□□ -0.53
CPNE1-228ENST00000498814 NPPCP23582 126 aa11.73□□□□□ -0.53
CPNE1-228ENST00000498814 BMI1P35226 326 aa11.73□□□□□ -0.53
CPNE1-228ENST00000498814 SULT1A1P50225 295 aa11.73□□□□□ -0.53
CPNE1-228ENST00000498814 ZNF90Q03938 601 aa11.73□□□□□ -0.53
CPNE1-228ENST00000498814 TMEM61Q8N0U2 210 aa11.73□□□□□ -0.53
CPNE1-228ENST00000498814 OR51G1Q8NGK1 321 aa11.73□□□□□ -0.53
CPNE1-228ENST00000498814 RHPN1-AS1Q9BWJ2 59 aa11.73□□□□□ -0.53
CPNE1-228ENST00000498814 NPVFQ9HCQ7 196 aa11.73□□□□□ -0.53
CPNE1-228ENST00000498814 OR5AC2Q9NZP5 309 aa11.73□□□□□ -0.53
CPNE1-228ENST00000498814 IGSF23A1L1A6 192 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms