RNA–Protein interactions for RNA: ENST00000498339.1

CDK9-205, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 458 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-205ENST00000498339 IL4P05112 153 aa8.22□□□□□ -1.09
CDK9-205ENST00000498339 RNASE2P10153 161 aaKnown RBP8.22□□□□□ -1.09
CDK9-205ENST00000498339 NKX2-1P43699 371 aaPredicted RBP8.22□□□□□ -1.09
CDK9-205ENST00000498339 AKR1C2P52895 323 aa8.22□□□□□ -1.09
CDK9-205ENST00000498339 AQP4P55087 323 aa8.22□□□□□ -1.09
CDK9-205ENST00000498339 MLANAQ16655 118 aa8.22□□□□□ -1.09
CDK9-205ENST00000498339 RRN3P1Q2M238 152 aa8.22□□□□□ -1.09
CDK9-205ENST00000498339 DHRS11Q6UWP2 260 aa8.22□□□□□ -1.09
CDK9-205ENST00000498339 COQ8AQ8NI60 647 aa8.22□□□□□ -1.09
CDK9-205ENST00000498339 Q8WTZ3 238 aa8.22□□□□□ -1.09
CDK9-205ENST00000498339 TMEM208Q9BTX3 173 aa8.22□□□□□ -1.09
CDK9-205ENST00000498339 MAGT1Q9H0U3 335 aa8.22□□□□□ -1.09
CDK9-205ENST00000498339 FNDC4Q9H6D8 234 aaPredicted RBP8.22□□□□□ -1.09
CDK9-205ENST00000498339 FAM212BQ9NTI7 297 aaPredicted RBP8.22□□□□□ -1.09
CDK9-205ENST00000498339 BLOC1S6Q9UL45 172 aa8.22□□□□□ -1.09
CDK9-205ENST00000498339 SSR3Q9UNL2 185 aa8.22□□□□□ -1.09
CDK9-205ENST00000498339 EBAG9O00559 213 aa8.21□□□□□ -1.1
CDK9-205ENST00000498339 GSTZ1O43708 216 aaPredicted RBP8.21□□□□□ -1.1
CDK9-205ENST00000498339 IGKV1-17P01599 117 aa8.21□□□□□ -1.1
CDK9-205ENST00000498339 PSMB9P28065 219 aa8.21□□□□□ -1.1
CDK9-205ENST00000498339 SDC2P34741 201 aa8.21□□□□□ -1.1
CDK9-205ENST00000498339 SCAND1P57086 179 aa8.21□□□□□ -1.1
CDK9-205ENST00000498339 TSPAN5P62079 268 aa8.21□□□□□ -1.1
CDK9-205ENST00000498339 CLINT1Q14677 625 aa8.21□□□□□ -1.1
CDK9-205ENST00000498339 LPCAT3Q6P1A2 487 aa8.21□□□□□ -1.1
CDK9-205ENST00000498339 OR1S2Q8NGQ3 325 aa8.21□□□□□ -1.1
CDK9-205ENST00000498339 SLC35B3Q9H1N7 401 aa8.21□□□□□ -1.1
CDK9-205ENST00000498339 SEPSECSQ9HD40 501 aaKnown RBP8.21□□□□□ -1.1
CDK9-205ENST00000498339 U3KQE9 123 aa8.21□□□□□ -1.1
CDK9-205ENST00000498339 F5H768 121 aa8.2□□□□□ -1.1
CDK9-205ENST00000498339 CLEC2LP0C7M8 214 aa8.2□□□□□ -1.1
CDK9-205ENST00000498339 OR10J1P30954 320 aa8.2□□□□□ -1.1
CDK9-205ENST00000498339 HRH1P35367 487 aa8.2□□□□□ -1.1
CDK9-205ENST00000498339 ETV6P41212 452 aa8.2□□□□□ -1.1
CDK9-205ENST00000498339 RORCP51449 518 aa8.2□□□□□ -1.1
CDK9-205ENST00000498339 RND2P52198 227 aa8.2□□□□□ -1.1
CDK9-205ENST00000498339 TAS2R20P59543 309 aa8.2□□□□□ -1.1
CDK9-205ENST00000498339 KRTAP10-2P60368 255 aa8.2□□□□□ -1.1
CDK9-205ENST00000498339 DLK1P80370 383 aa8.2□□□□□ -1.1
CDK9-205ENST00000498339 DHODHQ02127 395 aa8.2□□□□□ -1.1
CDK9-205ENST00000498339 USF2Q15853 346 aaPredicted RBP8.2□□□□□ -1.1
CDK9-205ENST00000498339 FOXI2Q6ZQN5 318 aa8.2□□□□□ -1.1
CDK9-205ENST00000498339 ZNF709Q8N972 641 aa8.2□□□□□ -1.1
CDK9-205ENST00000498339 RNASE11Q8TAA1 199 aaKnown RBP8.2□□□□□ -1.1
CDK9-205ENST00000498339 SAV1Q9H4B6 383 aaPredicted RBP8.2□□□□□ -1.1
CDK9-205ENST00000498339 M0QYG6 137 aa8.19□□□□□ -1.1
CDK9-205ENST00000498339 IGLC1P0CG04 106 aa8.19□□□□□ -1.1
CDK9-205ENST00000498339 DEFB130BP0DP73 79 aa8.19□□□□□ -1.1
CDK9-205ENST00000498339 DEFB130AP0DP74 79 aa8.19□□□□□ -1.1
CDK9-205ENST00000498339 HLA-DMAP28067 261 aa8.19□□□□□ -1.1
CDK9-205ENST00000498339 ID1P41134 155 aa8.19□□□□□ -1.1
CDK9-205ENST00000498339 ALDH3B2P48448 385 aa8.19□□□□□ -1.1
CDK9-205ENST00000498339 TTC32Q5I0X7 151 aa8.19□□□□□ -1.1
CDK9-205ENST00000498339 EBLN2Q6P2I7 272 aa8.19□□□□□ -1.1
CDK9-205ENST00000498339 CNBD2Q96M20 576 aa8.19□□□□□ -1.1
CDK9-205ENST00000498339 SCPEP1Q9HB40 452 aa8.19□□□□□ -1.1
CDK9-205ENST00000498339 PTTG2Q9NZH5 202 aa8.19□□□□□ -1.1
CDK9-205ENST00000498339 LINC00588Q9Y4M8 146 aa8.19□□□□□ -1.1
CDK9-205ENST00000498339 BUB3O43684 328 aa8.18□□□□□ -1.1
CDK9-205ENST00000498339 RPL5P46777 297 aaKnown RBP8.18□□□□□ -1.1
CDK9-205ENST00000498339 PSG9Q00887 426 aa8.18□□□□□ -1.1
CDK9-205ENST00000498339 TMEM69Q5SWH9 247 aa8.18□□□□□ -1.1
CDK9-205ENST00000498339 C1orf158Q8N1D5 194 aa8.18□□□□□ -1.1
CDK9-205ENST00000498339 FRZBQ92765 325 aa8.18□□□□□ -1.1
CDK9-205ENST00000498339 PBDC1Q9BVG4 233 aa8.18□□□□□ -1.1
CDK9-205ENST00000498339 MYCBP2O75592 4640 aa8.18□□□□□ -1.1
CDK9-205ENST00000498339 LOC100506127A0A0U1RQW1 187 aa8.17□□□□□ -1.1
CDK9-205ENST00000498339 INS-IGF2F8WCM5 200 aa8.17□□□□□ -1.1
CDK9-205ENST00000498339 ATG12O94817 140 aa8.17□□□□□ -1.1
CDK9-205ENST00000498339 IGKV1-5P01602 117 aa8.17□□□□□ -1.1
CDK9-205ENST00000498339 PGAM2P15259 253 aa8.17□□□□□ -1.1
CDK9-205ENST00000498339 HSPA13P48723 471 aa8.17□□□□□ -1.1
CDK9-205ENST00000498339 PSMB3P49720 205 aa8.17□□□□□ -1.1
CDK9-205ENST00000498339 YPEL3P61236 119 aaPredicted RBP8.17□□□□□ -1.1
CDK9-205ENST00000498339 TRIM16LQ309B1 348 aa8.17□□□□□ -1.1
CDK9-205ENST00000498339 Q5VSD8 79 aa8.17□□□□□ -1.1
CDK9-205ENST00000498339 SSX7Q7RTT5 188 aa8.17□□□□□ -1.1
CDK9-205ENST00000498339 OR4C16Q8NGL9 310 aa8.17□□□□□ -1.1
CDK9-205ENST00000498339 S100A16Q96FQ6 103 aaKnown RBP8.17□□□□□ -1.1
CDK9-205ENST00000498339 A0A0B4J293 547 aa8.16□□□□□ -1.1
CDK9-205ENST00000498339 LYRM9A8MSI8 78 aa8.16□□□□□ -1.1
CDK9-205ENST00000498339 F6UB75 175 aa8.16□□□□□ -1.1
CDK9-205ENST00000498339 RD3LP0DJH9 198 aa8.16□□□□□ -1.1
CDK9-205ENST00000498339 SLC25A4P12235 298 aa8.16□□□□□ -1.1
CDK9-205ENST00000498339 NUP62P37198 522 aaPredicted RBP8.16□□□□□ -1.1
CDK9-205ENST00000498339 HTR2BP41595 481 aa8.16□□□□□ -1.1
CDK9-205ENST00000498339 ZNF79Q15937 498 aa8.16□□□□□ -1.1
CDK9-205ENST00000498339 FAM78BQ5VT40 261 aa8.16□□□□□ -1.1
CDK9-205ENST00000498339 SPATA31B1PQ5VZV4 182 aa8.16□□□□□ -1.1
CDK9-205ENST00000498339 PRSS54Q6PEW0 395 aa8.16□□□□□ -1.1
CDK9-205ENST00000498339 OR51G1Q8NGK1 321 aa8.16□□□□□ -1.1
CDK9-205ENST00000498339 RNF141Q8WVD5 230 aa8.16□□□□□ -1.1
CDK9-205ENST00000498339 RRNAD1Q96FB5 475 aaKnown RBP8.16□□□□□ -1.1
CDK9-205ENST00000498339 ACY3Q96HD9 319 aa8.16□□□□□ -1.1
CDK9-205ENST00000498339 WDR12Q9GZL7 423 aaKnown RBP8.16□□□□□ -1.1
CDK9-205ENST00000498339 Q9H8V8 135 aa8.16□□□□□ -1.1
CDK9-205ENST00000498339 KLK11Q9UBX7 282 aa8.16□□□□□ -1.1
CDK9-205ENST00000498339 PFDN2Q9UHV9 154 aa8.16□□□□□ -1.1
CDK9-205ENST00000498339 ANAPC10Q9UM13 185 aa8.16□□□□□ -1.1
CDK9-205ENST00000498339 VPS13BQ7Z7G8 4022 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms