RNA–Protein interactions for RNA: ENST00000498280.1

RBM39-242, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-242ENST00000498280 TRIM4Q9C037 500 aa0.54□□□□□ -2.32
RBM39-242ENST00000498280 MIXL1Q9H2W2 232 aa0.54□□□□□ -2.32
RBM39-242ENST00000498280 TAS2R4Q9NYW5 299 aa0.54□□□□□ -2.32
RBM39-242ENST00000498280 IDI2-AS1Q9NZ38 188 aa0.54□□□□□ -2.32
RBM39-242ENST00000498280 KLK9Q9UKQ9 250 aa0.54□□□□□ -2.32
RBM39-242ENST00000498280 ECM29Q5VYK3 1845 aa0.54□□□□□ -2.32
RBM39-242ENST00000498280 CCDC144AA2RUR9 1427 aa0.54□□□□□ -2.32
RBM39-242ENST00000498280 PIK3C2GO75747 1445 aa0.54□□□□□ -2.32
RBM39-242ENST00000498280 MED12LQ86YW9 2145 aa0.53□□□□□ -2.32
RBM39-242ENST00000498280 CACNA1BQ00975 2339 aa0.53□□□□□ -2.32
RBM39-242ENST00000498280 TNRC6BQ9UPQ9 1833 aaKnown RBP0.53□□□□□ -2.32
RBM39-242ENST00000498280 ZNF106Q9H2Y7 1883 aaKnown RBP0.53□□□□□ -2.32
RBM39-242ENST00000498280 TRBV6-8A0A0A6YYG3 113 aa0.53□□□□□ -2.32
RBM39-242ENST00000498280 TRAV12-1A0A0B4J245 112 aa0.53□□□□□ -2.32
RBM39-242ENST00000498280 TMEM114B3SHH9 223 aa0.53□□□□□ -2.32
RBM39-242ENST00000498280 SULT1B1O43704 296 aa0.53□□□□□ -2.32
RBM39-242ENST00000498280 PDE6DO43924 150 aa0.53□□□□□ -2.32
RBM39-242ENST00000498280 HYPMO75409 117 aa0.53□□□□□ -2.32
RBM39-242ENST00000498280 LYZL6O75951 148 aa0.53□□□□□ -2.32
RBM39-242ENST00000498280 OR2B3O76000 313 aa0.53□□□□□ -2.32
RBM39-242ENST00000498280 SERPINE1P05121 402 aa0.53□□□□□ -2.32
RBM39-242ENST00000498280 OR4E1P0C645 316 aa0.53□□□□□ -2.32
RBM39-242ENST00000498280 BAALC-AS2P0C853 105 aa0.53□□□□□ -2.32
RBM39-242ENST00000498280 CNBPP62633 177 aaKnown RBP0.53□□□□□ -2.32
RBM39-242ENST00000498280 RHOGP84095 191 aa0.53□□□□□ -2.32
RBM39-242ENST00000498280 DEFB113Q30KQ7 82 aa0.53□□□□□ -2.32
RBM39-242ENST00000498280 LCA10Q71F78 164 aa0.53□□□□□ -2.32
RBM39-242ENST00000498280 OR6V1Q8N148 313 aa0.53□□□□□ -2.32
RBM39-242ENST00000498280 OR51A2Q8NGJ7 313 aa0.53□□□□□ -2.32
RBM39-242ENST00000498280 OR8D4Q8NGM9 314 aa0.53□□□□□ -2.32
RBM39-242ENST00000498280 SFT2D1Q8WV19 159 aa0.53□□□□□ -2.32
RBM39-242ENST00000498280 ADAT3Q96EY9 351 aaPredicted RBP0.53□□□□□ -2.32
RBM39-242ENST00000498280 GLTPQ9NZD2 209 aa0.53□□□□□ -2.32
RBM39-242ENST00000498280 ZFP30Q9Y2G7 519 aa0.53□□□□□ -2.32
RBM39-242ENST00000498280 ALPK2Q86TB3 2170 aa0.53□□□□□ -2.32
RBM39-242ENST00000498280 TECTAO75443 2155 aa0.52□□□□□ -2.33
RBM39-242ENST00000498280 LOC110117498A0A087WWA1 95 aa0.52□□□□□ -2.33
RBM39-242ENST00000498280 A0A087X0T9 212 aa0.52□□□□□ -2.33
RBM39-242ENST00000498280 IGKV1-9A0A0C4DH69 117 aa0.52□□□□□ -2.33
RBM39-242ENST00000498280 CLDN25C9JDP6 229 aa0.52□□□□□ -2.33
RBM39-242ENST00000498280 HAND1O96004 215 aa0.52□□□□□ -2.33
RBM39-242ENST00000498280 C8GP07360 202 aa0.52□□□□□ -2.33
RBM39-242ENST00000498280 PPIBP23284 216 aaKnown RBP0.52□□□□□ -2.33
RBM39-242ENST00000498280 SRIP30626 198 aa0.52□□□□□ -2.33
RBM39-242ENST00000498280 YPEL3P61236 119 aaPredicted RBP0.52□□□□□ -2.33
RBM39-242ENST00000498280 HIST1H3AP68431 136 aa0.52□□□□□ -2.33
RBM39-242ENST00000498280 H3F3AP84243 136 aa0.52□□□□□ -2.33
RBM39-242ENST00000498280 DEFB115Q30KQ5 88 aa0.52□□□□□ -2.33
RBM39-242ENST00000498280 TMEM97Q5BJF2 176 aa0.52□□□□□ -2.33
RBM39-242ENST00000498280 BRMS1LQ5PSV4 323 aa0.52□□□□□ -2.33
RBM39-242ENST00000498280 Q6Q795 121 aa0.52□□□□□ -2.33
RBM39-242ENST00000498280 OR52L1Q8NGH7 329 aa0.52□□□□□ -2.33
RBM39-242ENST00000498280 OR10J5Q8NHC4 309 aa0.52□□□□□ -2.33
RBM39-242ENST00000498280 ZNF418Q8TF45 676 aaPredicted RBP0.52□□□□□ -2.33
RBM39-242ENST00000498280 PRAP1Q96NZ9 151 aa0.52□□□□□ -2.33
RBM39-242ENST00000498280 UCK1Q9HA47 277 aa0.52□□□□□ -2.33
RBM39-242ENST00000498280 ACER3Q9NUN7 267 aa0.52□□□□□ -2.33
RBM39-242ENST00000498280 FBXO5Q9UKT4 447 aa0.52□□□□□ -2.33
RBM39-242ENST00000498280 EPDR1Q9UM22 224 aa0.52□□□□□ -2.33
RBM39-242ENST00000498280 SLC22A13Q9Y226 551 aa0.52□□□□□ -2.33
RBM39-242ENST00000498280 SLC35A3Q9Y2D2 325 aa0.52□□□□□ -2.33
RBM39-242ENST00000498280 UTP11Q9Y3A2 253 aaKnown RBP0.52□□□□□ -2.33
RBM39-242ENST00000498280 MED1Q15648 1581 aaPredicted RBP0.52□□□□□ -2.33
RBM39-242ENST00000498280 EXPH5Q8NEV8 1989 aa0.52□□□□□ -2.33
RBM39-242ENST00000498280 ROS1P08922 2347 aa0.52□□□□□ -2.33
RBM39-242ENST00000498280 PROSCO94903 275 aa0.51□□□□□ -2.33
RBM39-242ENST00000498280 SERPINB9P50453 376 aa0.51□□□□□ -2.33
RBM39-242ENST00000498280 AP3S2P59780 193 aa0.51□□□□□ -2.33
RBM39-242ENST00000498280 RHOBP62745 196 aa0.51□□□□□ -2.33
RBM39-242ENST00000498280 CCL7P80098 99 aa0.51□□□□□ -2.33
RBM39-242ENST00000498280 TSNQ15631 228 aaKnown RBP0.51□□□□□ -2.33
RBM39-242ENST00000498280 ESRGQ1W209 222 aa0.51□□□□□ -2.33
RBM39-242ENST00000498280 CLECL1Q8IZS7 167 aa0.51□□□□□ -2.33
RBM39-242ENST00000498280 C3orf56Q8N813 242 aa0.51□□□□□ -2.33
RBM39-242ENST00000498280 Q8N814 137 aa0.51□□□□□ -2.33
RBM39-242ENST00000498280 MNS1Q8NEH6 495 aa0.51□□□□□ -2.33
RBM39-242ENST00000498280 C2orf50Q96LR7 162 aa0.51□□□□□ -2.33
RBM39-242ENST00000498280 SIGMAR1Q99720 223 aa0.51□□□□□ -2.33
RBM39-242ENST00000498280 HIST1H2BLQ99880 126 aa0.51□□□□□ -2.33
RBM39-242ENST00000498280 MRPL57Q9BQC6 102 aaKnown RBP0.51□□□□□ -2.33
RBM39-242ENST00000498280 TVP23BQ9NYZ1 205 aa0.51□□□□□ -2.33
RBM39-242ENST00000498280 HS3ST2Q9Y278 367 aa0.51□□□□□ -2.33
RBM39-242ENST00000498280 PLXND1Q9Y4D7 1925 aa0.51□□□□□ -2.33
RBM39-242ENST00000498280 NCOA1Q15788 1441 aa0.5□□□□□ -2.33
RBM39-242ENST00000498280 RTL1A6NKG5 1358 aa0.5□□□□□ -2.33
RBM39-242ENST00000498280 C7orf71A4D174 169 aa0.5□□□□□ -2.33
RBM39-242ENST00000498280 CCDC160A6NGH7 325 aa0.5□□□□□ -2.33
RBM39-242ENST00000498280 CYB5BO43169 146 aa0.5□□□□□ -2.33
RBM39-242ENST00000498280 ERVS71-1P61550 626 aa0.5□□□□□ -2.33
RBM39-242ENST00000498280 C1orf137Q5JT78 98 aa0.5□□□□□ -2.33
RBM39-242ENST00000498280 LINC00301Q8NCQ3 95 aa0.5□□□□□ -2.33
RBM39-242ENST00000498280 STAG3L4Q8TBR4 150 aa0.5□□□□□ -2.33
RBM39-242ENST00000498280 SLAMF6Q96DU3 332 aa0.5□□□□□ -2.33
RBM39-242ENST00000498280 C6orf62Q9GZU0 229 aaPredicted RBP0.5□□□□□ -2.33
RBM39-242ENST00000498280 TLNRD1Q9H1K6 362 aa0.5□□□□□ -2.33
RBM39-242ENST00000498280 TMEM133Q9H2Q1 129 aa0.5□□□□□ -2.33
RBM39-242ENST00000498280 BCL2L10Q9HD36 194 aa0.5□□□□□ -2.33
RBM39-242ENST00000498280 CDC42SE1Q9NRR8 79 aa0.5□□□□□ -2.33
RBM39-242ENST00000498280 NHP2Q9NX24 153 aaKnown RBP0.5□□□□□ -2.33
RBM39-242ENST00000498280 NCOA6Q14686 2063 aaPredicted RBP0.5□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 253.7 ms