RNA–Protein interactions for RNA: ENST00000497993.5

TMEM39A-212, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 590 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-212ENST00000497993 SPANXB1Q9NS25 103 aaPredicted RBP4.45□□□□□ -1.7
TMEM39A-212ENST00000497993 TNFRSF19Q9NS68 423 aa4.45□□□□□ -1.7
TMEM39A-212ENST00000497993 RAB22AQ9UL26 194 aa4.45□□□□□ -1.7
TMEM39A-212ENST00000497993 TRAPPC2LQ9UL33 140 aa4.45□□□□□ -1.7
TMEM39A-212ENST00000497993 IGKV1-6A0A0C4DH72 117 aa4.44□□□□□ -1.7
TMEM39A-212ENST00000497993 FAM172BPA6NC97 362 aa4.44□□□□□ -1.7
TMEM39A-212ENST00000497993 OR5H14A6NHG9 310 aa4.44□□□□□ -1.7
TMEM39A-212ENST00000497993 F6UB75 175 aa4.44□□□□□ -1.7
TMEM39A-212ENST00000497993 K7EMT4 169 aa4.44□□□□□ -1.7
TMEM39A-212ENST00000497993 SLC31A2O15432 143 aa4.44□□□□□ -1.7
TMEM39A-212ENST00000497993 SOCS1O15524 211 aa4.44□□□□□ -1.7
TMEM39A-212ENST00000497993 CRXO43186 299 aaPredicted RBP4.44□□□□□ -1.7
TMEM39A-212ENST00000497993 MOSP00540 346 aa4.44□□□□□ -1.7
TMEM39A-212ENST00000497993 OXTP01178 125 aa4.44□□□□□ -1.7
TMEM39A-212ENST00000497993 IFNA5P01569 189 aa4.44□□□□□ -1.7
TMEM39A-212ENST00000497993 HLA-DRB1P01911 266 aa4.44□□□□□ -1.7
TMEM39A-212ENST00000497993 HIST1H1DP16402 221 aaKnown RBP4.44□□□□□ -1.7
TMEM39A-212ENST00000497993 RAB3BP20337 219 aa4.44□□□□□ -1.7
TMEM39A-212ENST00000497993 DTYMKP23919 212 aa4.44□□□□□ -1.7
TMEM39A-212ENST00000497993 MYL9P24844 172 aa4.44□□□□□ -1.7
TMEM39A-212ENST00000497993 NFYBP25208 207 aa4.44□□□□□ -1.7
TMEM39A-212ENST00000497993 BLVRBP30043 206 aaPredicted RBP4.44□□□□□ -1.7
TMEM39A-212ENST00000497993 VDAC2P45880 294 aaPredicted RBP4.44□□□□□ -1.7
TMEM39A-212ENST00000497993 SERPINB10P48595 397 aa4.44□□□□□ -1.7
TMEM39A-212ENST00000497993 NKX2-5P52952 324 aaPredicted RBP4.44□□□□□ -1.7
TMEM39A-212ENST00000497993 OR10A3P58181 314 aa4.44□□□□□ -1.7
TMEM39A-212ENST00000497993 ZNF726P1Q15940 193 aa4.44□□□□□ -1.7
TMEM39A-212ENST00000497993 POU2AF1Q16633 256 aa4.44□□□□□ -1.7
TMEM39A-212ENST00000497993 TCTEX1D4Q5JR98 221 aa4.44□□□□□ -1.7
TMEM39A-212ENST00000497993 FAM53AQ6NSI3 398 aaPredicted RBP4.44□□□□□ -1.7
TMEM39A-212ENST00000497993 CCDC71LQ8N9Z2 235 aa4.44□□□□□ -1.7
TMEM39A-212ENST00000497993 OR51D1Q8NGF3 324 aa4.44□□□□□ -1.7
TMEM39A-212ENST00000497993 OR10X1Q8NGY0 326 aa4.44□□□□□ -1.7
TMEM39A-212ENST00000497993 OR2T10Q8NGZ9 312 aa4.44□□□□□ -1.7
TMEM39A-212ENST00000497993 ENKURQ8TC29 256 aa4.44□□□□□ -1.7
TMEM39A-212ENST00000497993 DYNC2LI1Q8TCX1 351 aa4.44□□□□□ -1.7
TMEM39A-212ENST00000497993 NEK7Q8TDX7 302 aa4.44□□□□□ -1.7
TMEM39A-212ENST00000497993 FLYWCH2Q96CP2 140 aaKnown RBP4.44□□□□□ -1.7
TMEM39A-212ENST00000497993 NABP2Q9BQ15 211 aa4.44□□□□□ -1.7
TMEM39A-212ENST00000497993 FAAP24Q9BTP7 215 aa4.44□□□□□ -1.7
TMEM39A-212ENST00000497993 C1QTNF4Q9BXJ3 329 aa4.44□□□□□ -1.7
TMEM39A-212ENST00000497993 PECRQ9BY49 303 aa4.44□□□□□ -1.7
TMEM39A-212ENST00000497993 OCR1Q9BZK8 76 aa4.44□□□□□ -1.7
TMEM39A-212ENST00000497993 CCDC90BQ9GZT6 254 aa4.44□□□□□ -1.7
TMEM39A-212ENST00000497993 PARLQ9H300 379 aa4.44□□□□□ -1.7
TMEM39A-212ENST00000497993 RNF167Q9H6Y7 350 aa4.44□□□□□ -1.7
TMEM39A-212ENST00000497993 PLGRKTQ9HBL7 147 aa4.44□□□□□ -1.7
TMEM39A-212ENST00000497993 HRASLSQ9HDD0 168 aa4.44□□□□□ -1.7
TMEM39A-212ENST00000497993 OR1A1Q9P1Q5 309 aa4.44□□□□□ -1.7
TMEM39A-212ENST00000497993 AK3Q9UIJ7 227 aa4.44□□□□□ -1.7
TMEM39A-212ENST00000497993 ANAPC10Q9UM13 185 aa4.44□□□□□ -1.7
TMEM39A-212ENST00000497993 SIGLEC9Q9Y336 463 aa4.44□□□□□ -1.7
TMEM39A-212ENST00000497993 COL7A1Q02388 2944 aa4.44□□□□□ -1.7
TMEM39A-212ENST00000497993 IGKV1D-8A0A087WSZ0 117 aa4.43□□□□□ -1.7
TMEM39A-212ENST00000497993 TRBV6-7A0A0A0MS04 114 aa4.43□□□□□ -1.7
TMEM39A-212ENST00000497993 TRAV39A0A0B4J263 110 aa4.43□□□□□ -1.7
TMEM39A-212ENST00000497993 A0A0B4J2A0 478 aa4.43□□□□□ -1.7
TMEM39A-212ENST00000497993 NUPL2O15504 423 aaKnown RBP4.43□□□□□ -1.7
TMEM39A-212ENST00000497993 HPGDSO60760 199 aa4.43□□□□□ -1.7
TMEM39A-212ENST00000497993 IGKV1D-33P01593 117 aa4.43□□□□□ -1.7
TMEM39A-212ENST00000497993 IGKV1-33P01594 117 aa4.43□□□□□ -1.7
TMEM39A-212ENST00000497993 HLA-AP01891 365 aaKnown RBP4.43□□□□□ -1.7
TMEM39A-212ENST00000497993 SAA2P0DJI9 122 aaPredicted RBP4.43□□□□□ -1.7
TMEM39A-212ENST00000497993 GADD45AP24522 165 aa4.43□□□□□ -1.7
TMEM39A-212ENST00000497993 GNRHRP30968 328 aa4.43□□□□□ -1.7
TMEM39A-212ENST00000497993 GPX4P36969 197 aaPredicted RBP4.43□□□□□ -1.7
TMEM39A-212ENST00000497993 GNG10P50151 68 aa4.43□□□□□ -1.7
TMEM39A-212ENST00000497993 RORCP51449 518 aa4.43□□□□□ -1.7
TMEM39A-212ENST00000497993 CLDN12P56749 244 aa4.43□□□□□ -1.7
TMEM39A-212ENST00000497993 RAB14P61106 215 aa4.43□□□□□ -1.7
TMEM39A-212ENST00000497993 KIR2DS1Q14954 304 aa4.43□□□□□ -1.7
TMEM39A-212ENST00000497993 MSMO1Q15800 293 aa4.43□□□□□ -1.7
TMEM39A-212ENST00000497993 TIMM50Q3ZCQ8 353 aa4.43□□□□□ -1.7
TMEM39A-212ENST00000497993 THOC7Q6I9Y2 204 aaKnown RBP4.43□□□□□ -1.7
TMEM39A-212ENST00000497993 SFXN4Q6P4A7 337 aa4.43□□□□□ -1.7
TMEM39A-212ENST00000497993 Q6ZRP5 223 aa4.43□□□□□ -1.7
TMEM39A-212ENST00000497993 CBLN2Q8IUK8 224 aa4.43□□□□□ -1.7
TMEM39A-212ENST00000497993 ARPC1AQ92747 370 aa4.43□□□□□ -1.7
TMEM39A-212ENST00000497993 LEAP2Q969E1 77 aa4.43□□□□□ -1.7
TMEM39A-212ENST00000497993 SLC25A38Q96DW6 304 aa4.43□□□□□ -1.7
TMEM39A-212ENST00000497993 ARHGAP5-AS1Q96IT6 56 aa4.43□□□□□ -1.7
TMEM39A-212ENST00000497993 MRPS26Q9BYN8 205 aaKnown RBP4.43□□□□□ -1.7
TMEM39A-212ENST00000497993 OR51E2Q9H255 320 aa4.43□□□□□ -1.7
TMEM39A-212ENST00000497993 DCSTAMPQ9H295 470 aa4.43□□□□□ -1.7
TMEM39A-212ENST00000497993 ABRACLQ9P1F3 81 aa4.43□□□□□ -1.7
TMEM39A-212ENST00000497993 SHPKQ9UHJ6 478 aa4.43□□□□□ -1.7
TMEM39A-212ENST00000497993 KLF12Q9Y4X4 402 aa4.43□□□□□ -1.7
TMEM39A-212ENST00000497993 A0A087WXM4 84 aa4.42□□□□□ -1.7
TMEM39A-212ENST00000497993 IGHV3-43A0A0B4J1X8 118 aa4.42□□□□□ -1.7
TMEM39A-212ENST00000497993 H0YJW9 148 aa4.42□□□□□ -1.7
TMEM39A-212ENST00000497993 DUS4LO95620 317 aaKnown RBP4.42□□□□□ -1.7
TMEM39A-212ENST00000497993 CD3GP09693 182 aa4.42□□□□□ -1.7
TMEM39A-212ENST00000497993 OR5AL1P0C617 328 aa4.42□□□□□ -1.7
TMEM39A-212ENST00000497993 IGHV3-43DP0DP04 118 aa4.42□□□□□ -1.7
TMEM39A-212ENST00000497993 PVALBP20472 110 aaPredicted RBP4.42□□□□□ -1.7
TMEM39A-212ENST00000497993 ZBTB25P24278 435 aa4.42□□□□□ -1.7
TMEM39A-212ENST00000497993 PSMB8P28062 276 aa4.42□□□□□ -1.7
TMEM39A-212ENST00000497993 PSMB9P28065 219 aa4.42□□□□□ -1.7
TMEM39A-212ENST00000497993 SDC2P34741 201 aa4.42□□□□□ -1.7
TMEM39A-212ENST00000497993 PPP1CCP36873 323 aaKnown RBP4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms