RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 PRR20AP86496 221 aa10.68□□□□□ -0.7
GAPVD1-220ENST00000497580 DHRS13Q6UX07 377 aa10.68□□□□□ -0.7
GAPVD1-220ENST00000497580 LRRC29Q8WV35 223 aa10.68□□□□□ -0.7
GAPVD1-220ENST00000497580 H1FXQ92522 213 aaKnown RBP10.68□□□□□ -0.7
GAPVD1-220ENST00000497580 DAZAP1Q96EP5 407 aaKnown RBP10.68□□□□□ -0.7
GAPVD1-220ENST00000497580 PEX7O00628 323 aa10.68□□□□□ -0.7
GAPVD1-220ENST00000497580 FABP2P12104 132 aa10.68□□□□□ -0.7
GAPVD1-220ENST00000497580 FAM162BQ5T6X4 162 aa10.68□□□□□ -0.7
GAPVD1-220ENST00000497580 Q8IYB0 196 aa10.68□□□□□ -0.7
GAPVD1-220ENST00000497580 MBD6Q96DN6 1003 aa10.68□□□□□ -0.7
GAPVD1-220ENST00000497580 IGKV1OR2-108A0A075B7D4 117 aa10.68□□□□□ -0.7
GAPVD1-220ENST00000497580 PROP1O75360 226 aa10.68□□□□□ -0.7
GAPVD1-220ENST00000497580 EIF4EBP1Q13541 118 aaPredicted RBP10.68□□□□□ -0.7
GAPVD1-220ENST00000497580 TMEM177Q53S58 311 aa10.68□□□□□ -0.7
GAPVD1-220ENST00000497580 PET117Q6UWS5 81 aa10.68□□□□□ -0.7
GAPVD1-220ENST00000497580 ACP7Q6ZNF0 438 aa10.68□□□□□ -0.7
GAPVD1-220ENST00000497580 WFDC3Q8IUB2 231 aa10.68□□□□□ -0.7
GAPVD1-220ENST00000497580 GUCD1Q96NT3 240 aa10.68□□□□□ -0.7
GAPVD1-220ENST00000497580 SLC25A10Q9UBX3 287 aaPredicted RBP10.68□□□□□ -0.7
GAPVD1-220ENST00000497580 K7EMI3 77 aa10.67□□□□□ -0.7
GAPVD1-220ENST00000497580 TNFSF15O95150 251 aa10.67□□□□□ -0.7
GAPVD1-220ENST00000497580 GCSHP23434 173 aa10.67□□□□□ -0.7
GAPVD1-220ENST00000497580 HOXC12P31275 282 aa10.67□□□□□ -0.7
GAPVD1-220ENST00000497580 VSTM2AQ8TAG5 236 aa10.67□□□□□ -0.7
GAPVD1-220ENST00000497580 ADTRPQ96IZ2 230 aa10.67□□□□□ -0.7
GAPVD1-220ENST00000497580 APOHP02749 345 aaPredicted RBP10.67□□□□□ -0.7
GAPVD1-220ENST00000497580 ADH4P08319 380 aa10.67□□□□□ -0.7
GAPVD1-220ENST00000497580 CEACAM3P40198 252 aa10.67□□□□□ -0.7
GAPVD1-220ENST00000497580 SLC35E4Q6ICL7 350 aa10.67□□□□□ -0.7
GAPVD1-220ENST00000497580 MDP1Q86V88 176 aa10.67□□□□□ -0.7
GAPVD1-220ENST00000497580 PRSS3P2Q8NHM4 247 aa10.67□□□□□ -0.7
GAPVD1-220ENST00000497580 WIPF2Q8TF74 440 aaPredicted RBP10.67□□□□□ -0.7
GAPVD1-220ENST00000497580 IGHV1-45A0A0A0MS14 117 aa10.67□□□□□ -0.7
GAPVD1-220ENST00000497580 COX7A2P2O60397 106 aa10.67□□□□□ -0.7
GAPVD1-220ENST00000497580 OR2J3O76001 311 aa10.67□□□□□ -0.7
GAPVD1-220ENST00000497580 P01737 135 aa10.67□□□□□ -0.7
GAPVD1-220ENST00000497580 RAB9AP51151 201 aa10.67□□□□□ -0.7
GAPVD1-220ENST00000497580 FA2HQ7L5A8 372 aa10.67□□□□□ -0.7
GAPVD1-220ENST00000497580 MS4A6AQ9H2W1 248 aa10.67□□□□□ -0.7
GAPVD1-220ENST00000497580 MED13Q9UHV7 2174 aa10.66□□□□□ -0.7
GAPVD1-220ENST00000497580 SPAARA0A1B0GVQ0 90 aa10.66□□□□□ -0.7
GAPVD1-220ENST00000497580 H3BRM9 83 aa10.66□□□□□ -0.7
GAPVD1-220ENST00000497580 DNPH1O43598 174 aa10.66□□□□□ -0.7
GAPVD1-220ENST00000497580 FOLR3P41439 243 aa10.66□□□□□ -0.7
GAPVD1-220ENST00000497580 PLGLB1Q02325 96 aa10.66□□□□□ -0.7
GAPVD1-220ENST00000497580 HSD52Q0P140 79 aa10.66□□□□□ -0.7
GAPVD1-220ENST00000497580 PAXXQ9BUH6 204 aa10.66□□□□□ -0.7
GAPVD1-220ENST00000497580 CACNA1HO95180 2353 aa10.66□□□□□ -0.7
GAPVD1-220ENST00000497580 A1L4Q6 167 aa10.66□□□□□ -0.7
GAPVD1-220ENST00000497580 PINLYPA6NC86 204 aa10.66□□□□□ -0.7
GAPVD1-220ENST00000497580 SCGB2A2Q13296 93 aa10.66□□□□□ -0.7
GAPVD1-220ENST00000497580 ZNF146Q15072 292 aa10.66□□□□□ -0.7
GAPVD1-220ENST00000497580 OR10W1Q8NGF6 305 aa10.66□□□□□ -0.7
GAPVD1-220ENST00000497580 ASCL2Q99929 193 aa10.66□□□□□ -0.7
GAPVD1-220ENST00000497580 RASL11AQ6T310 242 aa10.66□□□□□ -0.7
GAPVD1-220ENST00000497580 CHCHD1Q96BP2 118 aaKnown RBP10.66□□□□□ -0.7
GAPVD1-220ENST00000497580 SLC25A33Q9BSK2 321 aa10.66□□□□□ -0.7
GAPVD1-220ENST00000497580 TNRC6AQ8NDV7 1962 aaKnown RBP10.65□□□□□ -0.7
GAPVD1-220ENST00000497580 PPIAL4EA0A075B759 164 aa10.65□□□□□ -0.7
GAPVD1-220ENST00000497580 CRXO43186 299 aaPredicted RBP10.65□□□□□ -0.7
GAPVD1-220ENST00000497580 PPIAL4FP0DN26 164 aa10.65□□□□□ -0.7
GAPVD1-220ENST00000497580 COX6A1P12074 109 aa10.65□□□□□ -0.7
GAPVD1-220ENST00000497580 CXCL12P48061 93 aa10.65□□□□□ -0.7
GAPVD1-220ENST00000497580 K7ERJ3 54 aa10.65□□□□□ -0.7
GAPVD1-220ENST00000497580 NDUFS8O00217 210 aa10.65□□□□□ -0.7
GAPVD1-220ENST00000497580 HSPE1P61604 102 aaKnown RBP10.65□□□□□ -0.7
GAPVD1-220ENST00000497580 WDR82Q6UXN9 313 aa10.65□□□□□ -0.7
GAPVD1-220ENST00000497580 AP5S1Q9NUS5 200 aa10.65□□□□□ -0.7
GAPVD1-220ENST00000497580 A0A1W2PPM0 123 aa10.65□□□□□ -0.71
GAPVD1-220ENST00000497580 A8MWL6 223 aa10.65□□□□□ -0.71
GAPVD1-220ENST00000497580 C22orf46C9J442 243 aa10.65□□□□□ -0.71
GAPVD1-220ENST00000497580 ACP1P24666 158 aa10.65□□□□□ -0.71
GAPVD1-220ENST00000497580 TMPRSS3P57727 454 aa10.65□□□□□ -0.71
GAPVD1-220ENST00000497580 CKS1BP61024 79 aa10.65□□□□□ -0.71
GAPVD1-220ENST00000497580 UTF1Q5T230 341 aa10.65□□□□□ -0.71
GAPVD1-220ENST00000497580 NEGR1Q7Z3B1 354 aa10.65□□□□□ -0.71
GAPVD1-220ENST00000497580 ATP6V0BQ99437 205 aa10.65□□□□□ -0.71
GAPVD1-220ENST00000497580 ZNF257Q9Y2Q1 563 aa10.65□□□□□ -0.71
GAPVD1-220ENST00000497580 MRPS17Q9Y2R5 130 aaKnown RBP10.65□□□□□ -0.71
GAPVD1-220ENST00000497580 PIEZO2Q9H5I5 2752 aa10.64□□□□□ -0.71
GAPVD1-220ENST00000497580 TRAV26-1A0A087WT03 109 aa10.64□□□□□ -0.71
GAPVD1-220ENST00000497580 PGPA6NDG6 321 aa10.64□□□□□ -0.71
GAPVD1-220ENST00000497580 ERVK11-1P61568 191 aa10.64□□□□□ -0.71
GAPVD1-220ENST00000497580 PSG3Q16557 428 aa10.64□□□□□ -0.71
GAPVD1-220ENST00000497580 ADAMTSL5Q6ZMM2 481 aa10.64□□□□□ -0.71
GAPVD1-220ENST00000497580 LINC00322Q6ZN03 302 aaPredicted RBP10.64□□□□□ -0.71
GAPVD1-220ENST00000497580 FLYWCH2Q96CP2 140 aaKnown RBP10.64□□□□□ -0.71
GAPVD1-220ENST00000497580 LOXL2Q9Y4K0 774 aa10.64□□□□□ -0.71
GAPVD1-220ENST00000497580 F2RL2O00254 374 aa10.64□□□□□ -0.71
GAPVD1-220ENST00000497580 IGLV3-19P01714 112 aa10.64□□□□□ -0.71
GAPVD1-220ENST00000497580 SAMD5Q5TGI4 173 aa10.64□□□□□ -0.71
GAPVD1-220ENST00000497580 RPP21Q9H633 154 aaKnown RBP10.64□□□□□ -0.71
GAPVD1-220ENST00000497580 TEX50A0A1B0GTY4 177 aa10.63□□□□□ -0.71
GAPVD1-220ENST00000497580 C15orf61A6NNL5 157 aa10.63□□□□□ -0.71
GAPVD1-220ENST00000497580 ORM2P19652 201 aa10.63□□□□□ -0.71
GAPVD1-220ENST00000497580 CACNG7P62955 275 aa10.63□□□□□ -0.71
GAPVD1-220ENST00000497580 UBALD2Q8IYN6 164 aa10.63□□□□□ -0.71
GAPVD1-220ENST00000497580 GTSF1Q8WW33 167 aa10.63□□□□□ -0.71
GAPVD1-220ENST00000497580 MED13LQ71F56 2210 aa10.63□□□□□ -0.71
GAPVD1-220ENST00000497580 PLCE1Q9P212 2302 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms