RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 IFNA7P01567 189 aa4□□□□□ -1.77
BRCA1-224ENST00000497488 APOA2P02652 100 aa4□□□□□ -1.77
BRCA1-224ENST00000497488 CISD3P0C7P0 127 aa4□□□□□ -1.77
BRCA1-224ENST00000497488 GPX2P18283 190 aa4□□□□□ -1.77
BRCA1-224ENST00000497488 S100A7P31151 101 aa4□□□□□ -1.77
BRCA1-224ENST00000497488 EMP1P54849 157 aa4□□□□□ -1.77
BRCA1-224ENST00000497488 TAS2R45P59539 299 aa4□□□□□ -1.77
BRCA1-224ENST00000497488 LPAL2Q16609 132 aa4□□□□□ -1.77
BRCA1-224ENST00000497488 SMIM21Q3B7S5 101 aa4□□□□□ -1.77
BRCA1-224ENST00000497488 SCGB2B2Q4G0G5 96 aa4□□□□□ -1.77
BRCA1-224ENST00000497488 OR8J3Q8NGG0 315 aa4□□□□□ -1.77
BRCA1-224ENST00000497488 OR4K13Q8NH42 304 aa4□□□□□ -1.77
BRCA1-224ENST00000497488 WFDC5Q8TCV5 224 aa4□□□□□ -1.77
BRCA1-224ENST00000497488 MBD3L1Q8WWY6 194 aa4□□□□□ -1.77
BRCA1-224ENST00000497488 ACOT12Q8WYK0 555 aa4□□□□□ -1.77
BRCA1-224ENST00000497488 RNASE6Q93091 150 aaKnown RBP4□□□□□ -1.77
BRCA1-224ENST00000497488 CAPZA3Q96KX2 299 aa4□□□□□ -1.77
BRCA1-224ENST00000497488 C1QTNF6Q9BXI9 259 aa4□□□□□ -1.77
BRCA1-224ENST00000497488 RPUSD1Q9UJJ7 312 aaKnown RBP4□□□□□ -1.77
BRCA1-224ENST00000497488 ZDBF2Q9HCK1 2354 aa4□□□□□ -1.77
BRCA1-224ENST00000497488 FRYLO94915 3013 aa3.99□□□□□ -1.77
BRCA1-224ENST00000497488 MUC6Q6W4X9 2439 aa3.99□□□□□ -1.77
BRCA1-224ENST00000497488 TRAV9-1A0A075B6T8 112 aa3.99□□□□□ -1.77
BRCA1-224ENST00000497488 A0A087WX48 190 aa3.99□□□□□ -1.77
BRCA1-224ENST00000497488 DPRXA6NFQ7 191 aa3.99□□□□□ -1.77
BRCA1-224ENST00000497488 RBFOX2O43251 390 aaKnown RBP eCLIP3.99□□□□□ -1.77
BRCA1-224ENST00000497488 ZNF861PO60384 105 aa3.99□□□□□ -1.77
BRCA1-224ENST00000497488 GADD45GO95257 159 aa3.99□□□□□ -1.77
BRCA1-224ENST00000497488 APODP05090 189 aa3.99□□□□□ -1.77
BRCA1-224ENST00000497488 SRP19P09132 144 aaKnown RBP3.99□□□□□ -1.77
BRCA1-224ENST00000497488 ZNF705DP0CH99 300 aaPredicted RBP3.99□□□□□ -1.77
BRCA1-224ENST00000497488 ATP6V0CP27449 155 aa3.99□□□□□ -1.77
BRCA1-224ENST00000497488 HBA1P69905 142 aa3.99□□□□□ -1.77
BRCA1-224ENST00000497488 ZFAND6Q6FIF0 208 aa3.99□□□□□ -1.77
BRCA1-224ENST00000497488 PRSS54Q6PEW0 395 aa3.99□□□□□ -1.77
BRCA1-224ENST00000497488 Q6ZTC4 211 aa3.99□□□□□ -1.77
BRCA1-224ENST00000497488 DEFB106AQ8N104 65 aa3.99□□□□□ -1.77
BRCA1-224ENST00000497488 MIR7-3HGQ8N6C7 128 aa3.99□□□□□ -1.77
BRCA1-224ENST00000497488 OR4D11Q8NGI4 311 aa3.99□□□□□ -1.77
BRCA1-224ENST00000497488 OR9A2Q8NGT5 310 aa3.99□□□□□ -1.77
BRCA1-224ENST00000497488 THEM6Q8WUY1 208 aa3.99□□□□□ -1.77
BRCA1-224ENST00000497488 TOMM6Q96B49 74 aa3.99□□□□□ -1.77
BRCA1-224ENST00000497488 PFDN5Q99471 154 aa3.99□□□□□ -1.77
BRCA1-224ENST00000497488 SPIN2AQ99865 258 aa3.99□□□□□ -1.77
BRCA1-224ENST00000497488 SPIN2BQ9BPZ2 258 aa3.99□□□□□ -1.77
BRCA1-224ENST00000497488 NDFIP1Q9BT67 221 aa3.99□□□□□ -1.77
BRCA1-224ENST00000497488 GABARAPL1Q9H0R8 117 aa3.99□□□□□ -1.77
BRCA1-224ENST00000497488 MED11Q9P086 117 aa3.99□□□□□ -1.77
BRCA1-224ENST00000497488 NUBP2Q9Y5Y2 271 aa3.99□□□□□ -1.77
BRCA1-224ENST00000497488 LRP4O75096 1905 aa3.99□□□□□ -1.77
BRCA1-224ENST00000497488 MUC22E2RYF6 1773 aaPredicted RBP3.99□□□□□ -1.77
BRCA1-224ENST00000497488 MYH10P35580 1976 aa3.98□□□□□ -1.77
BRCA1-224ENST00000497488 CFAP54Q96N23 3096 aa3.98□□□□□ -1.77
BRCA1-224ENST00000497488 TMEM269A0A1B0GVZ9 245 aa3.98□□□□□ -1.77
BRCA1-224ENST00000497488 SERPINB10P48595 397 aa3.98□□□□□ -1.77
BRCA1-224ENST00000497488 TBPL1P62380 186 aa3.98□□□□□ -1.77
BRCA1-224ENST00000497488 DHRS2Q13268 280 aa3.98□□□□□ -1.77
BRCA1-224ENST00000497488 DEFB116Q30KQ4 102 aa3.98□□□□□ -1.77
BRCA1-224ENST00000497488 ADM2Q7Z4H4 148 aa3.98□□□□□ -1.77
BRCA1-224ENST00000497488 LRRC18Q8N456 261 aa3.98□□□□□ -1.77
BRCA1-224ENST00000497488 PACRGLQ8N7B6 248 aa3.98□□□□□ -1.77
BRCA1-224ENST00000497488 LINC00574Q9H8X3 128 aa3.98□□□□□ -1.77
BRCA1-224ENST00000497488 SPANXCQ9NY87 97 aa3.98□□□□□ -1.77
BRCA1-224ENST00000497488 KLK5Q9Y337 293 aaPredicted RBP3.98□□□□□ -1.77
BRCA1-224ENST00000497488 AMMECR1Q9Y4X0 333 aaPredicted RBP3.98□□□□□ -1.77
BRCA1-224ENST00000497488 DCHS1Q96JQ0 3298 aa3.97□□□□□ -1.77
BRCA1-224ENST00000497488 FANCMQ8IYD8 2048 aa3.97□□□□□ -1.77
BRCA1-224ENST00000497488 DMXL1Q9Y485 3027 aa3.97□□□□□ -1.77
BRCA1-224ENST00000497488 PINLYPA6NC86 204 aa3.97□□□□□ -1.77
BRCA1-224ENST00000497488 A8MWP4 228 aa3.97□□□□□ -1.77
BRCA1-224ENST00000497488 J3QRK9 145 aa3.97□□□□□ -1.77
BRCA1-224ENST00000497488 DEGS1O15121 323 aa3.97□□□□□ -1.77
BRCA1-224ENST00000497488 ZNF324O75467 553 aaPredicted RBP3.97□□□□□ -1.77
BRCA1-224ENST00000497488 OR2J2O76002 312 aa3.97□□□□□ -1.77
BRCA1-224ENST00000497488 ADRA2AP08913 450 aa3.97□□□□□ -1.77
BRCA1-224ENST00000497488 HLA-EP13747 358 aa3.97□□□□□ -1.77
BRCA1-224ENST00000497488 ELK1P19419 428 aa3.97□□□□□ -1.77
BRCA1-224ENST00000497488 NPY1RP25929 384 aa3.97□□□□□ -1.77
BRCA1-224ENST00000497488 BLVRBP30043 206 aaPredicted RBP3.97□□□□□ -1.77
BRCA1-224ENST00000497488 CKS1BP61024 79 aa3.97□□□□□ -1.77
BRCA1-224ENST00000497488 RPS28P62857 69 aaKnown RBP3.97□□□□□ -1.77
BRCA1-224ENST00000497488 MRGPRG-AS1Q2M3A8 158 aa3.97□□□□□ -1.77
BRCA1-224ENST00000497488 Q5W150 140 aa3.97□□□□□ -1.77
BRCA1-224ENST00000497488 Q6ZR03 302 aa3.97□□□□□ -1.77
BRCA1-224ENST00000497488 ZFAND2AQ8N6M9 145 aa3.97□□□□□ -1.77
BRCA1-224ENST00000497488 SPANXA2-OT1Q8N9U9 137 aa3.97□□□□□ -1.77
BRCA1-224ENST00000497488 NUP35Q8NFH5 326 aa3.97□□□□□ -1.77
BRCA1-224ENST00000497488 TSTD1Q8NFU3 115 aa3.97□□□□□ -1.77
BRCA1-224ENST00000497488 OR10D4PQ8NGN7 298 aa3.97□□□□□ -1.77
BRCA1-224ENST00000497488 RNASE11Q8TAA1 199 aaKnown RBP3.97□□□□□ -1.77
BRCA1-224ENST00000497488 FOPNLQ96NB1 174 aa3.97□□□□□ -1.77
BRCA1-224ENST00000497488 GTF3C1Q12789 2109 aa3.97□□□□□ -1.77
BRCA1-224ENST00000497488 KIF26BQ2KJY2 2108 aa3.97□□□□□ -1.77
BRCA1-224ENST00000497488 F5P12259 2224 aa3.97□□□□□ -1.77
BRCA1-224ENST00000497488 EML5Q05BV3 1969 aa3.96□□□□□ -1.77
BRCA1-224ENST00000497488 CHD5Q8TDI0 1954 aa3.96□□□□□ -1.77
BRCA1-224ENST00000497488 MYOFQ9NZM1 2061 aa3.96□□□□□ -1.77
BRCA1-224ENST00000497488 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.96□□□□□ -1.78
BRCA1-224ENST00000497488 A0A1B0GW54 56 aa3.96□□□□□ -1.78
BRCA1-224ENST00000497488 TMX2-CTNND1H3BSU7 103 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms