RNA–Protein interactions for RNA: ENST00000497318.1

SUPT20H-223, Transcript of SPT20 homolog, SAGA complex component, human

TSL 3

Gene SUPT20H, Length 734 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SUPT20H-223	ENST00000497318	OXA1L	Q15070	435 aa		11.79	□□□□□ -0.52
SUPT20H-223	ENST00000497318	SPINK9	Q5DT21	86 aa		11.79	□□□□□ -0.52
SUPT20H-223	ENST00000497318	SEC22A	Q96IW7	307 aa		11.79	□□□□□ -0.52
SUPT20H-223	ENST00000497318	ATG101	Q9BSB4	218 aa		11.79	□□□□□ -0.52
SUPT20H-223	ENST00000497318	NAA50	Q9GZZ1	169 aa	Known RBP	11.79	□□□□□ -0.52
SUPT20H-223	ENST00000497318	DKK2	Q9UBU2	259 aa		11.79	□□□□□ -0.52
SUPT20H-223	ENST00000497318	TRAV30	A0A087WSZ9	112 aa		11.78	□□□□□ -0.52
SUPT20H-223	ENST00000497318	ZNF705F	A8MVS1	300 aa	Predicted RBP	11.78	□□□□□ -0.52
SUPT20H-223	ENST00000497318	ZNF705D	P0CH99	300 aa	Predicted RBP	11.78	□□□□□ -0.52
SUPT20H-223	ENST00000497318	ZNF705B	P0CI00	300 aa	Predicted RBP	11.78	□□□□□ -0.52
SUPT20H-223	ENST00000497318	PI3	P19957	117 aa		11.78	□□□□□ -0.52
SUPT20H-223	ENST00000497318	FAM222A	Q5U5X8	452 aa		11.78	□□□□□ -0.52
SUPT20H-223	ENST00000497318	SLC35G3	Q8N808	338 aa		11.78	□□□□□ -0.52
SUPT20H-223	ENST00000497318	OR4X1	Q8NH49	305 aa		11.78	□□□□□ -0.52
SUPT20H-223	ENST00000497318	IGHV3OR16-12	A0A075B7B8	117 aa		11.77	□□□□□ -0.53
SUPT20H-223	ENST00000497318	FAM90A26	D6RGX4	464 aa		11.77	□□□□□ -0.53
SUPT20H-223	ENST00000497318	TSPAN5	P62079	268 aa		11.77	□□□□□ -0.53
SUPT20H-223	ENST00000497318	C6orf223	Q8N319	242 aa		11.77	□□□□□ -0.53
SUPT20H-223	ENST00000497318	C15orf53	Q8NAA6	179 aa		11.77	□□□□□ -0.53
SUPT20H-223	ENST00000497318	MRGPRF	Q96AM1	343 aa		11.77	□□□□□ -0.53
SUPT20H-223	ENST00000497318	DMBT1	Q9UGM3	2413 aa	Predicted RBP	11.77	□□□□□ -0.53
SUPT20H-223	ENST00000497318	INS-IGF2	F8WCM5	200 aa		11.76	□□□□□ -0.53
SUPT20H-223	ENST00000497318	TNFAIP8	O95379	198 aa		11.76	□□□□□ -0.53
SUPT20H-223	ENST00000497318	APOA1	P02647	267 aa		11.76	□□□□□ -0.53
SUPT20H-223	ENST00000497318	HNRNPC	P07910	306 aa	Known RBP eCLIP	11.76	□□□□□ -0.53
SUPT20H-223	ENST00000497318	HLA-DRB4	P13762	266 aa		11.76	□□□□□ -0.53
SUPT20H-223	ENST00000497318	OPRK1	P41145	380 aa		11.76	□□□□□ -0.53
SUPT20H-223	ENST00000497318	RPL5	P46777	297 aa	Known RBP	11.76	□□□□□ -0.53
SUPT20H-223	ENST00000497318	TMEM88	Q6PEY1	159 aa		11.76	□□□□□ -0.53
SUPT20H-223	ENST00000497318	C16orf54	Q6UWD8	224 aa		11.76	□□□□□ -0.53
SUPT20H-223	ENST00000497318		Q8WTZ3	238 aa		11.76	□□□□□ -0.53
SUPT20H-223	ENST00000497318	PDCD10	Q9BUL8	212 aa		11.76	□□□□□ -0.53
SUPT20H-223	ENST00000497318	ENY2	Q9NPA8	101 aa		11.76	□□□□□ -0.53
SUPT20H-223	ENST00000497318	NRN1	Q9NPD7	142 aa		11.76	□□□□□ -0.53
SUPT20H-223	ENST00000497318	KLK11	Q9UBX7	282 aa		11.76	□□□□□ -0.53
SUPT20H-223	ENST00000497318		U3KQE9	123 aa		11.76	□□□□□ -0.53
SUPT20H-223	ENST00000497318	HLA-DRB4	X5D2U9	266 aa		11.76	□□□□□ -0.53
SUPT20H-223	ENST00000497318	NBDY	A0A0U1RRE5	68 aa		11.75	□□□□□ -0.53
SUPT20H-223	ENST00000497318	GSG1L	Q6UXU4	331 aa		11.75	□□□□□ -0.53
SUPT20H-223	ENST00000497318	GLMP	Q8WWB7	406 aa		11.75	□□□□□ -0.53
SUPT20H-223	ENST00000497318	RPS10-NUDT3	A0A1W2PQS6	291 aa		11.74	□□□□□ -0.53
SUPT20H-223	ENST00000497318	ATG12	O94817	140 aa		11.74	□□□□□ -0.53
SUPT20H-223	ENST00000497318	IGKV1-17	P01599	117 aa		11.74	□□□□□ -0.53
SUPT20H-223	ENST00000497318	IGKV1-5	P01602	117 aa		11.74	□□□□□ -0.53
SUPT20H-223	ENST00000497318	RCVRN	P35243	200 aa		11.74	□□□□□ -0.53
SUPT20H-223	ENST00000497318	NKX2-1	P43699	371 aa	Predicted RBP	11.74	□□□□□ -0.53
SUPT20H-223	ENST00000497318	DAD1	P61803	113 aa		11.74	□□□□□ -0.53
SUPT20H-223	ENST00000497318	TIGIT	Q495A1	244 aa		11.74	□□□□□ -0.53
SUPT20H-223	ENST00000497318	OR4D10	Q8NGI6	311 aa		11.74	□□□□□ -0.53
SUPT20H-223	ENST00000497318	VCX3A	Q9NNX9	186 aa		11.74	□□□□□ -0.53
SUPT20H-223	ENST00000497318	GOLT1B	Q9Y3E0	138 aa		11.74	□□□□□ -0.53
SUPT20H-223	ENST00000497318	SMIM31	A0A1B0GVY4	71 aa		11.73	□□□□□ -0.53
SUPT20H-223	ENST00000497318	GSTZ1	O43708	216 aa	Predicted RBP	11.73	□□□□□ -0.53
SUPT20H-223	ENST00000497318	HBE1	P02100	147 aa		11.73	□□□□□ -0.53
SUPT20H-223	ENST00000497318	SMIM18	P0DKX4	95 aa		11.73	□□□□□ -0.53
SUPT20H-223	ENST00000497318	RNASE2	P10153	161 aa	Known RBP	11.73	□□□□□ -0.53
SUPT20H-223	ENST00000497318	OR52I2	Q8NH67	350 aa		11.73	□□□□□ -0.53
SUPT20H-223	ENST00000497318	TP53RK	Q96S44	253 aa		11.73	□□□□□ -0.53
SUPT20H-223	ENST00000497318	C7orf50	Q9BRJ6	194 aa	Known RBP	11.73	□□□□□ -0.53
SUPT20H-223	ENST00000497318	SCPEP1	Q9HB40	452 aa		11.73	□□□□□ -0.53
SUPT20H-223	ENST00000497318	LRP1B	Q9NZR2	4599 aa		11.72	□□□□□ -0.53
SUPT20H-223	ENST00000497318		A0A0G2JRQ6	117 aa		11.72	□□□□□ -0.53
SUPT20H-223	ENST00000497318	FAM25A	B3EWG3	89 aa		11.72	□□□□□ -0.53
SUPT20H-223	ENST00000497318	FAM25C	B3EWG5	89 aa		11.72	□□□□□ -0.53
SUPT20H-223	ENST00000497318	FAM25G	B3EWG6	89 aa		11.72	□□□□□ -0.53
SUPT20H-223	ENST00000497318	IGKV3-20	P01619	116 aa		11.72	□□□□□ -0.53
SUPT20H-223	ENST00000497318	CD3D	P04234	171 aa		11.72	□□□□□ -0.53
SUPT20H-223	ENST00000497318	UCP3	P55916	312 aa		11.72	□□□□□ -0.53
SUPT20H-223	ENST00000497318	CTF1	Q16619	201 aa		11.72	□□□□□ -0.53
SUPT20H-223	ENST00000497318	OR1S2	Q8NGQ3	325 aa		11.72	□□□□□ -0.53
SUPT20H-223	ENST00000497318	FNDC4	Q9H6D8	234 aa	Predicted RBP	11.72	□□□□□ -0.53
SUPT20H-223	ENST00000497318	MRPL36	Q9P0J6	103 aa	Known RBP	11.72	□□□□□ -0.53
SUPT20H-223	ENST00000497318		A0A0B4J293	547 aa		11.71	□□□□□ -0.53
SUPT20H-223	ENST00000497318	LOC102723971	A0A1B0GUV8	181 aa		11.71	□□□□□ -0.53
SUPT20H-223	ENST00000497318		P0C879	139 aa		11.71	□□□□□ -0.53
SUPT20H-223	ENST00000497318	PGAM2	P15259	253 aa		11.71	□□□□□ -0.53
SUPT20H-223	ENST00000497318	ETV6	P41212	452 aa		11.71	□□□□□ -0.53
SUPT20H-223	ENST00000497318	YPEL3	P61236	119 aa	Predicted RBP	11.71	□□□□□ -0.53
SUPT20H-223	ENST00000497318	MLANA	Q16655	118 aa		11.71	□□□□□ -0.53
SUPT20H-223	ENST00000497318	SP6	Q3SY56	376 aa		11.71	□□□□□ -0.53
SUPT20H-223	ENST00000497318	SPATA31B1P	Q5VZV4	182 aa		11.71	□□□□□ -0.53
SUPT20H-223	ENST00000497318	SIGLEC15	Q6ZMC9	328 aa		11.71	□□□□□ -0.53
SUPT20H-223	ENST00000497318	SPATA12	Q7Z6I5	190 aa		11.71	□□□□□ -0.53
SUPT20H-223	ENST00000497318	LHFPL1	Q86WI0	220 aa		11.71	□□□□□ -0.53
SUPT20H-223	ENST00000497318	CLUHP3	Q96NS8	147 aa		11.71	□□□□□ -0.53
SUPT20H-223	ENST00000497318	ABHD1	Q96SE0	405 aa		11.71	□□□□□ -0.53
SUPT20H-223	ENST00000497318	PFDN2	Q9UHV9	154 aa		11.71	□□□□□ -0.53
SUPT20H-223	ENST00000497318	YTHDF2	Q9Y5A9	579 aa	Known RBP	11.71	□□□□□ -0.53
SUPT20H-223	ENST00000497318	ID1	P41134	155 aa		11.7	□□□□□ -0.54
SUPT20H-223	ENST00000497318	ALDH3B2	P48448	385 aa		11.7	□□□□□ -0.54
SUPT20H-223	ENST00000497318	RORC	P51449	518 aa		11.7	□□□□□ -0.54
SUPT20H-223	ENST00000497318	AKR1C2	P52895	323 aa		11.7	□□□□□ -0.54
SUPT20H-223	ENST00000497318	CCL18	P55774	89 aa		11.7	□□□□□ -0.54
SUPT20H-223	ENST00000497318	PIGP	P57054	158 aa		11.7	□□□□□ -0.54
SUPT20H-223	ENST00000497318	FXYD7	P58549	80 aa		11.7	□□□□□ -0.54
SUPT20H-223	ENST00000497318	DHODH	Q02127	395 aa		11.7	□□□□□ -0.54
SUPT20H-223	ENST00000497318	RRN3P1	Q2M238	152 aa		11.7	□□□□□ -0.54
SUPT20H-223	ENST00000497318	MIXL1	Q9H2W2	232 aa		11.7	□□□□□ -0.54
SUPT20H-223	ENST00000497318	EXTL2	Q9UBQ6	330 aa		11.7	□□□□□ -0.54
SUPT20H-223	ENST00000497318	APOB	P04114	4563 aa	Known RBP	11.69	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms