RNA–Protein interactions for RNA: ENST00000497026.5

CSMD3-208, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 1,406 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-208ENST00000497026 ANKRD30BLA7E2S9 258 aa3.97□□□□□ -1.77
CSMD3-208ENST00000497026 TMEM14DPA8MWL7 114 aa3.97□□□□□ -1.77
CSMD3-208ENST00000497026 IFNL4K9M1U5 179 aa3.97□□□□□ -1.77
CSMD3-208ENST00000497026 PHF1O43189 567 aaPredicted RBP3.97□□□□□ -1.77
CSMD3-208ENST00000497026 YPEL1O60688 119 aa3.97□□□□□ -1.77
CSMD3-208ENST00000497026 HYPMO75409 117 aa3.97□□□□□ -1.77
CSMD3-208ENST00000497026 NRASP01111 189 aa3.97□□□□□ -1.77
CSMD3-208ENST00000497026 KRASP01116 189 aa3.97□□□□□ -1.77
CSMD3-208ENST00000497026 LHBP01229 141 aa3.97□□□□□ -1.77
CSMD3-208ENST00000497026 GYPAP02724 150 aa3.97□□□□□ -1.77
CSMD3-208ENST00000497026 ISG15P05161 165 aa3.97□□□□□ -1.77
CSMD3-208ENST00000497026 IGLC2P0DOY2 106 aa3.97□□□□□ -1.77
CSMD3-208ENST00000497026 IGLC3P0DOY3 106 aa3.97□□□□□ -1.77
CSMD3-208ENST00000497026 AADACP22760 399 aa3.97□□□□□ -1.77
CSMD3-208ENST00000497026 S100A7P31151 101 aa3.97□□□□□ -1.77
CSMD3-208ENST00000497026 PSMB3P49720 205 aa3.97□□□□□ -1.77
CSMD3-208ENST00000497026 SNU13P55769 128 aaKnown RBP3.97□□□□□ -1.77
CSMD3-208ENST00000497026 KRTDAPP60985 99 aa3.97□□□□□ -1.77
CSMD3-208ENST00000497026 CCL20P78556 96 aa3.97□□□□□ -1.77
CSMD3-208ENST00000497026 UNC119Q13432 240 aa3.97□□□□□ -1.77
CSMD3-208ENST00000497026 MMDQ15546 238 aa3.97□□□□□ -1.77
CSMD3-208ENST00000497026 COX19Q49B96 90 aa3.97□□□□□ -1.77
CSMD3-208ENST00000497026 SPIN3Q5JUX0 258 aa3.97□□□□□ -1.77
CSMD3-208ENST00000497026 DUX4L9Q6RFH8 374 aaPredicted RBP3.97□□□□□ -1.77
CSMD3-208ENST00000497026 UNQ5815/PRO19632Q6UWF5 114 aa3.97□□□□□ -1.77
CSMD3-208ENST00000497026 WDR82Q6UXN9 313 aa3.97□□□□□ -1.77
CSMD3-208ENST00000497026 C19orf35Q6ZS72 473 aa3.97□□□□□ -1.77
CSMD3-208ENST00000497026 GTF2H5Q6ZYL4 71 aa3.97□□□□□ -1.77
CSMD3-208ENST00000497026 CENPVQ7Z7K6 275 aaPredicted RBP3.97□□□□□ -1.77
CSMD3-208ENST00000497026 BAGE3Q86Y29 109 aa3.97□□□□□ -1.77
CSMD3-208ENST00000497026 BAGE2Q86Y30 109 aa3.97□□□□□ -1.77
CSMD3-208ENST00000497026 KCNG3Q8TAE7 436 aa3.97□□□□□ -1.77
CSMD3-208ENST00000497026 OR51E1Q8TCB6 317 aa3.97□□□□□ -1.77
CSMD3-208ENST00000497026 SCGB1C1Q8TD33 95 aa3.97□□□□□ -1.77
CSMD3-208ENST00000497026 PINX1Q96BK5 328 aaKnown RBP3.97□□□□□ -1.77
CSMD3-208ENST00000497026 TMEM56Q96MV1 263 aa3.97□□□□□ -1.77
CSMD3-208ENST00000497026 YPEL2Q96QA6 119 aa3.97□□□□□ -1.77
CSMD3-208ENST00000497026 PSMG3Q9BT73 122 aaPredicted RBP3.97□□□□□ -1.77
CSMD3-208ENST00000497026 PARLQ9H300 379 aa3.97□□□□□ -1.77
CSMD3-208ENST00000497026 ZNF391Q9UJN7 358 aa3.97□□□□□ -1.77
CSMD3-208ENST00000497026 SLC22A13Q9Y226 551 aa3.97□□□□□ -1.77
CSMD3-208ENST00000497026 MRPS28Q9Y2Q9 187 aaKnown RBP3.97□□□□□ -1.77
CSMD3-208ENST00000497026 MPC1Q9Y5U8 109 aa3.97□□□□□ -1.77
CSMD3-208ENST00000497026 TMEM56-RWDD3S4R434 201 aa3.97□□□□□ -1.77
CSMD3-208ENST00000497026 A0A0U1RQK1 487 aa3.96□□□□□ -1.77
CSMD3-208ENST00000497026 ZNF816-ZNF321PA0A0X1KG74 233 aa3.96□□□□□ -1.77
CSMD3-208ENST00000497026 SERTM2A0A1B0GWG4 89 aa3.96□□□□□ -1.77
CSMD3-208ENST00000497026 IGLC7A0M8Q6 106 aa3.96□□□□□ -1.77
CSMD3-208ENST00000497026 OOEPA6NGQ2 149 aa3.96□□□□□ -1.77
CSMD3-208ENST00000497026 LRRC30A6NM36 301 aa3.96□□□□□ -1.77
CSMD3-208ENST00000497026 ZNF850A8MQ14 1090 aa3.96□□□□□ -1.77
CSMD3-208ENST00000497026 SRRM5B3KS81 715 aa3.96□□□□□ -1.77
CSMD3-208ENST00000497026 C17orf112F2Z3M2 114 aa3.96□□□□□ -1.77
CSMD3-208ENST00000497026 H3BSH0 61 aa3.96□□□□□ -1.77
CSMD3-208ENST00000497026 ZNF253O75346 499 aa3.96□□□□□ -1.77
CSMD3-208ENST00000497026 FOXH1O75593 365 aa3.96□□□□□ -1.77
CSMD3-208ENST00000497026 DHRS3O75911 302 aa3.96□□□□□ -1.77
CSMD3-208ENST00000497026 MT-CO2P00403 227 aa3.96□□□□□ -1.77
CSMD3-208ENST00000497026 CRISP2P16562 243 aa3.96□□□□□ -1.77
CSMD3-208ENST00000497026 CCL1P22362 96 aa3.96□□□□□ -1.77
CSMD3-208ENST00000497026 GLRA1P23415 457 aa3.96□□□□□ -1.77
CSMD3-208ENST00000497026 IL3RAP26951 378 aa3.96□□□□□ -1.77
CSMD3-208ENST00000497026 TSPOP30536 169 aa3.96□□□□□ -1.77
CSMD3-208ENST00000497026 CFHR2P36980 270 aa3.96□□□□□ -1.77
CSMD3-208ENST00000497026 CTRLP40313 264 aa3.96□□□□□ -1.77
CSMD3-208ENST00000497026 NKX2-1P43699 371 aaPredicted RBP3.96□□□□□ -1.77
CSMD3-208ENST00000497026 HINT1P49773 126 aaPredicted RBP3.96□□□□□ -1.77
CSMD3-208ENST00000497026 RPL15P61313 204 aaKnown RBP3.96□□□□□ -1.77
CSMD3-208ENST00000497026 HERV-K104P61576 105 aa3.96□□□□□ -1.77
CSMD3-208ENST00000497026 RPL23P62829 140 aaKnown RBP3.96□□□□□ -1.77
CSMD3-208ENST00000497026 GNB2P62879 340 aa3.96□□□□□ -1.77
CSMD3-208ENST00000497026 MEF2BQ02080 365 aaPredicted RBP3.96□□□□□ -1.77
CSMD3-208ENST00000497026 KRTAP24-1Q3LI83 254 aa3.96□□□□□ -1.77
CSMD3-208ENST00000497026 SLC22A6Q4U2R8 563 aa3.96□□□□□ -1.77
CSMD3-208ENST00000497026 KLF17Q5JT82 389 aaPredicted RBP3.96□□□□□ -1.77
CSMD3-208ENST00000497026 TEX36Q5VZQ5 186 aa3.96□□□□□ -1.77
CSMD3-208ENST00000497026 TMEM42Q69YG0 159 aa3.96□□□□□ -1.77
CSMD3-208ENST00000497026 STUMQ69YW2 141 aa3.96□□□□□ -1.77
CSMD3-208ENST00000497026 FAM71F2Q6NXP2 309 aa3.96□□□□□ -1.77
CSMD3-208ENST00000497026 FGFRL1Q8N441 504 aa3.96□□□□□ -1.77
CSMD3-208ENST00000497026 TMEM217Q8N7C4 229 aa3.96□□□□□ -1.77
CSMD3-208ENST00000497026 OR11L1Q8NGX0 322 aa3.96□□□□□ -1.77
CSMD3-208ENST00000497026 OR4S2Q8NH73 311 aa3.96□□□□□ -1.77
CSMD3-208ENST00000497026 LRRC29Q8WV35 223 aa3.96□□□□□ -1.77
CSMD3-208ENST00000497026 OR5P3Q8WZ94 311 aa3.96□□□□□ -1.77
CSMD3-208ENST00000497026 PIGCQ92535 297 aa3.96□□□□□ -1.77
CSMD3-208ENST00000497026 BORCS7Q96B45 105 aa3.96□□□□□ -1.77
CSMD3-208ENST00000497026 AP1S3Q96PC3 154 aa3.96□□□□□ -1.77
CSMD3-208ENST00000497026 RTL8AQ9BWD3 113 aa3.96□□□□□ -1.77
CSMD3-208ENST00000497026 MAP6D1Q9H9H5 199 aa3.96□□□□□ -1.77
CSMD3-208ENST00000497026 PEF1Q9UBV8 284 aaKnown RBP3.96□□□□□ -1.77
CSMD3-208ENST00000497026 PSG11Q9UQ72 335 aa3.96□□□□□ -1.77
CSMD3-208ENST00000497026 INSIG2Q9Y5U4 225 aa3.96□□□□□ -1.77
CSMD3-208ENST00000497026 PXMP4Q9Y6I8 212 aa3.96□□□□□ -1.77
CSMD3-208ENST00000497026 JMJD1CQ15652 2540 aa3.96□□□□□ -1.78
CSMD3-208ENST00000497026 IGHV3OR15-7A0A075B7D8 119 aa3.95□□□□□ -1.78
CSMD3-208ENST00000497026 TRAV34A0A0B4J273 112 aa3.95□□□□□ -1.78
CSMD3-208ENST00000497026 IGSF23A1L1A6 192 aa3.95□□□□□ -1.78
CSMD3-208ENST00000497026 J3QLI3 93 aa3.95□□□□□ -1.78
CSMD3-208ENST00000497026 M0R1X1 148 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms