RNA–Protein interactions for RNA: ENST00000496826.1

USF3-204, Transcript of upstream transcription factor family member 3, humanhuman

TSL 1 (best)

Gene USF3, Length 8,397 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-204ENST00000496826 DPTQ07507 201 aa4.9□□□□□ -1.63
USF3-204ENST00000496826 C18orf15Q96N68 181 aa4.9□□□□□ -1.63
USF3-204ENST00000496826 SAA2-SAA4A0A096LPE2 208 aa4.89□□□□□ -1.63
USF3-204ENST00000496826 A0A1W2PNR3 127 aa4.89□□□□□ -1.63
USF3-204ENST00000496826 SAA2P0DJI9 122 aaPredicted RBP4.89□□□□□ -1.63
USF3-204ENST00000496826 C1orf194Q5T5A4 169 aa4.89□□□□□ -1.63
USF3-204ENST00000496826 TMEM14BQ9NUH8 114 aa4.89□□□□□ -1.63
USF3-204ENST00000496826 CRIM1Q9NZV1 1036 aa4.89□□□□□ -1.63
USF3-204ENST00000496826 PPLO60437 1756 aa4.89□□□□□ -1.63
USF3-204ENST00000496826 FAM223BA6NKX1 122 aa4.89□□□□□ -1.63
USF3-204ENST00000496826 Q6ZNB5 142 aa4.89□□□□□ -1.63
USF3-204ENST00000496826 FAM223AQ8IWN6 122 aa4.89□□□□□ -1.63
USF3-204ENST00000496826 Q8N9L7 120 aa4.89□□□□□ -1.63
USF3-204ENST00000496826 CACNG4Q9UBN1 327 aa4.89□□□□□ -1.63
USF3-204ENST00000496826 PREX2Q70Z35 1606 aa4.89□□□□□ -1.63
USF3-204ENST00000496826 TRGV1A0A0A0MS02 117 aa4.89□□□□□ -1.63
USF3-204ENST00000496826 FSHBP01225 129 aa4.89□□□□□ -1.63
USF3-204ENST00000496826 CELA2BP08218 269 aaPredicted RBP4.89□□□□□ -1.63
USF3-204ENST00000496826 METRNLQ641Q3 311 aa4.89□□□□□ -1.63
USF3-204ENST00000496826 TRAV13-1A0A0B4J241 112 aa4.89□□□□□ -1.63
USF3-204ENST00000496826 A0A1B0GWJ7 208 aa4.89□□□□□ -1.63
USF3-204ENST00000496826 A6NED7 52 aa4.89□□□□□ -1.63
USF3-204ENST00000496826 KLHDC3Q9BQ90 382 aa4.89□□□□□ -1.63
USF3-204ENST00000496826 PTPRQQ9UMZ3 2332 aa4.89□□□□□ -1.63
USF3-204ENST00000496826 MYF5P13349 255 aa4.89□□□□□ -1.63
USF3-204ENST00000496826 LYPD1Q8N2G4 141 aa4.89□□□□□ -1.63
USF3-204ENST00000496826 RPP25Q9BUL9 199 aaKnown RBP4.89□□□□□ -1.63
USF3-204ENST00000496826 PRRC2AP48634 2157 aaKnown RBP4.89□□□□□ -1.63
USF3-204ENST00000496826 PROB1E7EW31 1015 aa4.89□□□□□ -1.63
USF3-204ENST00000496826 ICOSLGO75144 302 aa4.89□□□□□ -1.63
USF3-204ENST00000496826 XCL1P47992 114 aa4.89□□□□□ -1.63
USF3-204ENST00000496826 ASPHD1Q5U4P2 390 aa4.89□□□□□ -1.63
USF3-204ENST00000496826 IGHV1-24A0A0C4DH33 117 aa4.89□□□□□ -1.63
USF3-204ENST00000496826 OTX1P32242 354 aaPredicted RBP4.89□□□□□ -1.63
USF3-204ENST00000496826 ICAM4Q14773 271 aa4.89□□□□□ -1.63
USF3-204ENST00000496826 STPG1Q5TH74 334 aa4.89□□□□□ -1.63
USF3-204ENST00000496826 LAIR2Q6ISS4 152 aa4.89□□□□□ -1.63
USF3-204ENST00000496826 ODF3L1Q8IXM7 274 aa4.89□□□□□ -1.63
USF3-204ENST00000496826 OPRPNQ99935 248 aaPredicted RBP4.89□□□□□ -1.63
USF3-204ENST00000496826 RFNGQ9Y644 331 aa4.89□□□□□ -1.63
USF3-204ENST00000496826 AFDNP55196 1824 aaKnown RBP4.89□□□□□ -1.63
USF3-204ENST00000496826 IGHV2-70DA0A0C4DH43 119 aa4.88□□□□□ -1.63
USF3-204ENST00000496826 H0Y9J4 135 aa4.88□□□□□ -1.63
USF3-204ENST00000496826 FAM222AQ5U5X8 452 aa4.88□□□□□ -1.63
USF3-204ENST00000496826 HEPN1Q6WQI6 88 aa4.88□□□□□ -1.63
USF3-204ENST00000496826 KLRG1Q96E93 195 aa4.88□□□□□ -1.63
USF3-204ENST00000496826 IGKV3D-20A0A0C4DH25 116 aa4.88□□□□□ -1.63
USF3-204ENST00000496826 TISP43B9A030 160 aa4.88□□□□□ -1.63
USF3-204ENST00000496826 SOCS1O15524 211 aa4.88□□□□□ -1.63
USF3-204ENST00000496826 FGF16O43320 207 aa4.88□□□□□ -1.63
USF3-204ENST00000496826 FGF9P31371 208 aaPredicted RBP4.88□□□□□ -1.63
USF3-204ENST00000496826 CXorf67Q86X51 503 aaPredicted RBP4.88□□□□□ -1.63
USF3-204ENST00000496826 NPWQ8N729 165 aa4.88□□□□□ -1.63
USF3-204ENST00000496826 GLMPQ8WWB7 406 aa4.88□□□□□ -1.63
USF3-204ENST00000496826 GTSF1LQ9H1H1 148 aa4.88□□□□□ -1.63
USF3-204ENST00000496826 IL17CQ9P0M4 197 aa4.88□□□□□ -1.63
USF3-204ENST00000496826 MYO5BQ9ULV0 1848 aa4.88□□□□□ -1.63
USF3-204ENST00000496826 FXYD1O00168 92 aa4.88□□□□□ -1.63
USF3-204ENST00000496826 DGCR2P98153 550 aa4.88□□□□□ -1.63
USF3-204ENST00000496826 C18orf12Q96KH6 178 aa4.88□□□□□ -1.63
USF3-204ENST00000496826 FAM186AA6NE01 2351 aa4.88□□□□□ -1.63
USF3-204ENST00000496826 PYCARD-AS1I3L0S3 204 aa4.88□□□□□ -1.63
USF3-204ENST00000496826 CELA3BP08861 270 aa4.88□□□□□ -1.63
USF3-204ENST00000496826 VSIG8P0DPA2 414 aa4.88□□□□□ -1.63
USF3-204ENST00000496826 EGR4Q05215 589 aa4.88□□□□□ -1.63
USF3-204ENST00000496826 INSL4Q14641 139 aa4.88□□□□□ -1.63
USF3-204ENST00000496826 TPRX1Q8N7U7 411 aa4.88□□□□□ -1.63
USF3-204ENST00000496826 FANCD2OSQ96PS1 177 aa4.88□□□□□ -1.63
USF3-204ENST00000496826 SPATA31D1Q6ZQQ2 1576 aa4.88□□□□□ -1.63
USF3-204ENST00000496826 IGKV1D-42A0A075B6H8 117 aa4.88□□□□□ -1.63
USF3-204ENST00000496826 H3BMG7 143 aa4.88□□□□□ -1.63
USF3-204ENST00000496826 GLI4P10075 376 aa4.88□□□□□ -1.63
USF3-204ENST00000496826 FGFRL1Q8N441 504 aa4.88□□□□□ -1.63
USF3-204ENST00000496826 SMCHD1A6NHR9 2005 aa4.88□□□□□ -1.63
USF3-204ENST00000496826 WIZO95785 1651 aa4.88□□□□□ -1.63
USF3-204ENST00000496826 TRAV23DV6A0A075B6W5 121 aa4.88□□□□□ -1.63
USF3-204ENST00000496826 TMEM61Q8N0U2 210 aa4.88□□□□□ -1.63
USF3-204ENST00000496826 ZNF784Q8NCA9 323 aaPredicted RBP4.88□□□□□ -1.63
USF3-204ENST00000496826 ARRDC1-AS1Q9H2J1 176 aa4.88□□□□□ -1.63
USF3-204ENST00000496826 AKAP12Q02952 1782 aa4.88□□□□□ -1.63
USF3-204ENST00000496826 NOTCH3Q9UM47 2321 aa4.87□□□□□ -1.63
USF3-204ENST00000496826 TMEM256-PLSCR3K7ERE1 68 aa4.87□□□□□ -1.63
USF3-204ENST00000496826 CD59P13987 128 aa4.87□□□□□ -1.63
USF3-204ENST00000496826 EFNB3Q15768 340 aa4.87□□□□□ -1.63
USF3-204ENST00000496826 ZNF625Q96I27 306 aaPredicted RBP4.87□□□□□ -1.63
USF3-204ENST00000496826 F5H768 121 aa4.87□□□□□ -1.63
USF3-204ENST00000496826 NRTNQ99748 197 aa4.87□□□□□ -1.63
USF3-204ENST00000496826 FNDC4Q9H6D8 234 aaPredicted RBP4.87□□□□□ -1.63
USF3-204ENST00000496826 PDLIM7Q9NR12 457 aa4.87□□□□□ -1.63
USF3-204ENST00000496826 A0A0B4J2C4 111 aa4.87□□□□□ -1.63
USF3-204ENST00000496826 CELA2AP08217 269 aa4.87□□□□□ -1.63
USF3-204ENST00000496826 NANOS3P60323 173 aaKnown RBP4.87□□□□□ -1.63
USF3-204ENST00000496826 MINOS1Q5TGZ0 78 aa4.87□□□□□ -1.63
USF3-204ENST00000496826 SDIM1Q6ZPB5 146 aa4.87□□□□□ -1.63
USF3-204ENST00000496826 ATP6V0BQ99437 205 aa4.87□□□□□ -1.63
USF3-204ENST00000496826 HIST1H2BLQ99880 126 aa4.87□□□□□ -1.63
USF3-204ENST00000496826 SRXN1Q9BYN0 137 aa4.87□□□□□ -1.63
USF3-204ENST00000496826 MINOS1-NBL1R4GNA1 71 aa4.87□□□□□ -1.63
USF3-204ENST00000496826 MAGI3Q5TCQ9 1506 aa4.87□□□□□ -1.63
USF3-204ENST00000496826 A0A1W2PPV9 198 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms