RNA–Protein interactions for RNA: ENST00000496549.5

CRNKL1-205, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,093 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-205ENST00000496549 C10orf113Q5VZT2 155 aa6.76□□□□□ -1.33
CRNKL1-205ENST00000496549 SNRNP200O75643 2136 aaKnown RBP6.76□□□□□ -1.33
CRNKL1-205ENST00000496549 PLXNA2O75051 1894 aa6.76□□□□□ -1.33
CRNKL1-205ENST00000496549 ZNF32P17041 273 aa6.76□□□□□ -1.33
CRNKL1-205ENST00000496549 RPL7P18124 248 aaKnown RBP6.76□□□□□ -1.33
CRNKL1-205ENST00000496549 GAB4Q2WGN9 574 aa6.76□□□□□ -1.33
CRNKL1-205ENST00000496549 ZNF766Q5HY98 468 aa6.76□□□□□ -1.33
CRNKL1-205ENST00000496549 SPATA46Q5T0L3 261 aa6.76□□□□□ -1.33
CRNKL1-205ENST00000496549 Q6AWC8 147 aa6.76□□□□□ -1.33
CRNKL1-205ENST00000496549 Q8IYB0 196 aa6.76□□□□□ -1.33
CRNKL1-205ENST00000496549 OR4C13Q8NGP0 309 aa6.76□□□□□ -1.33
CRNKL1-205ENST00000496549 TRAV2A0A0B4J234 112 aa6.76□□□□□ -1.33
CRNKL1-205ENST00000496549 ATP5LO75964 103 aa6.76□□□□□ -1.33
CRNKL1-205ENST00000496549 HSPE1P61604 102 aaKnown RBP6.76□□□□□ -1.33
CRNKL1-205ENST00000496549 PCP2Q8IVA1 136 aa6.76□□□□□ -1.33
CRNKL1-205ENST00000496549 WDR31Q8NA23 367 aa6.76□□□□□ -1.33
CRNKL1-205ENST00000496549 GLMPQ8WWB7 406 aa6.76□□□□□ -1.33
CRNKL1-205ENST00000496549 MGST2Q99735 147 aa6.76□□□□□ -1.33
CRNKL1-205ENST00000496549 SPANXDQ9BXN6 97 aa6.76□□□□□ -1.33
CRNKL1-205ENST00000496549 HIGD1BQ9P298 99 aa6.76□□□□□ -1.33
CRNKL1-205ENST00000496549 MPC1Q9Y5U8 109 aa6.76□□□□□ -1.33
CRNKL1-205ENST00000496549 B4GALT1P15291 398 aa6.75□□□□□ -1.33
CRNKL1-205ENST00000496549 XGP55808 180 aa6.75□□□□□ -1.33
CRNKL1-205ENST00000496549 RNPS1Q15287 305 aaKnown RBP6.75□□□□□ -1.33
CRNKL1-205ENST00000496549 LINC01559Q495D7 138 aa6.75□□□□□ -1.33
CRNKL1-205ENST00000496549 ORMDL3Q8N138 153 aa6.75□□□□□ -1.33
CRNKL1-205ENST00000496549 OR9G1Q8NH87 305 aa6.75□□□□□ -1.33
CRNKL1-205ENST00000496549 ELSPBP1Q96BH3 223 aa6.75□□□□□ -1.33
CRNKL1-205ENST00000496549 MRPS17Q9Y2R5 130 aaKnown RBP6.75□□□□□ -1.33
CRNKL1-205ENST00000496549 LSM4Q9Y4Z0 139 aaKnown RBP6.75□□□□□ -1.33
CRNKL1-205ENST00000496549 SEC16AO15027 2179 aa6.75□□□□□ -1.33
CRNKL1-205ENST00000496549 NUP210LQ5VU65 1888 aa6.75□□□□□ -1.33
CRNKL1-205ENST00000496549 CHD7Q9P2D1 2997 aa6.75□□□□□ -1.33
CRNKL1-205ENST00000496549 IGKV1-12A0A0C4DH73 117 aa6.75□□□□□ -1.33
CRNKL1-205ENST00000496549 PGPA6NDG6 321 aa6.75□□□□□ -1.33
CRNKL1-205ENST00000496549 E9PLD3 99 aa6.75□□□□□ -1.33
CRNKL1-205ENST00000496549 IGKV1D-12P01611 117 aa6.75□□□□□ -1.33
CRNKL1-205ENST00000496549 ERHP84090 104 aaKnown RBP6.75□□□□□ -1.33
CRNKL1-205ENST00000496549 PCSK4Q6UW60 755 aa6.75□□□□□ -1.33
CRNKL1-205ENST00000496549 ABHD12Q8N2K0 398 aa6.75□□□□□ -1.33
CRNKL1-205ENST00000496549 FOXC2Q99958 501 aa6.75□□□□□ -1.33
CRNKL1-205ENST00000496549 RTL8AQ9BWD3 113 aa6.75□□□□□ -1.33
CRNKL1-205ENST00000496549 VPREB3Q9UKI3 123 aa6.75□□□□□ -1.33
CRNKL1-205ENST00000496549 ZNF146Q15072 292 aa6.75□□□□□ -1.33
CRNKL1-205ENST00000496549 PLGLAQ15195 96 aa6.75□□□□□ -1.33
CRNKL1-205ENST00000496549 ABHD17BQ5VST6 288 aa6.75□□□□□ -1.33
CRNKL1-205ENST00000496549 FLYWCH2Q96CP2 140 aaKnown RBP6.75□□□□□ -1.33
CRNKL1-205ENST00000496549 RALGAPA1Q6GYQ0 2036 aa6.75□□□□□ -1.33
CRNKL1-205ENST00000496549 CEACAM4O75871 244 aa6.74□□□□□ -1.33
CRNKL1-205ENST00000496549 HERVK_113P61574 105 aa6.74□□□□□ -1.33
CRNKL1-205ENST00000496549 HES3Q5TGS1 186 aa6.74□□□□□ -1.33
CRNKL1-205ENST00000496549 SRSF12Q8WXF0 261 aaKnown RBP6.74□□□□□ -1.33
CRNKL1-205ENST00000496549 TIMD4Q96H15 378 aa6.74□□□□□ -1.33
CRNKL1-205ENST00000496549 DEFB126Q9BYW3 111 aa6.74□□□□□ -1.33
CRNKL1-205ENST00000496549 CRISPLD2Q9H0B8 497 aa6.74□□□□□ -1.33
CRNKL1-205ENST00000496549 KIAA1549Q9HCM3 1950 aa6.74□□□□□ -1.33
CRNKL1-205ENST00000496549 CCDC179H3BU77 68 aa6.74□□□□□ -1.33
CRNKL1-205ENST00000496549 FAM106CPP0CH98 169 aa6.74□□□□□ -1.33
CRNKL1-205ENST00000496549 KIR2DS2P43631 304 aa6.74□□□□□ -1.33
CRNKL1-205ENST00000496549 FAM106AQ4KMX7 169 aa6.74□□□□□ -1.33
CRNKL1-205ENST00000496549 WFDC3Q8IUB2 231 aa6.74□□□□□ -1.33
CRNKL1-205ENST00000496549 C8orf46Q8TAG6 207 aa6.74□□□□□ -1.33
CRNKL1-205ENST00000496549 ONECUT1Q9UBC0 465 aa6.74□□□□□ -1.33
CRNKL1-205ENST00000496549 BRWD1Q9NSI6 2320 aa6.74□□□□□ -1.33
CRNKL1-205ENST00000496549 TMEM155Q4W5P6 130 aa6.74□□□□□ -1.33
CRNKL1-205ENST00000496549 GTSCR1Q86UQ5 136 aa6.74□□□□□ -1.33
CRNKL1-205ENST00000496549 ABHD17AQ96GS6 310 aa6.74□□□□□ -1.33
CRNKL1-205ENST00000496549 TMEM101Q96IK0 257 aa6.74□□□□□ -1.33
CRNKL1-205ENST00000496549 DLL3Q9NYJ7 618 aa6.74□□□□□ -1.33
CRNKL1-205ENST00000496549 KNL1Q8NG31 2342 aa6.74□□□□□ -1.33
CRNKL1-205ENST00000496549 UNC13CQ8NB66 2214 aa6.74□□□□□ -1.33
CRNKL1-205ENST00000496549 TRAV25A0A0B4J276 109 aa6.73□□□□□ -1.33
CRNKL1-205ENST00000496549 CD27P26842 260 aa6.73□□□□□ -1.33
CRNKL1-205ENST00000496549 IGLV3-21P80748 117 aaPredicted RBP6.73□□□□□ -1.33
CRNKL1-205ENST00000496549 MZT1Q08AG7 82 aa6.73□□□□□ -1.33
CRNKL1-205ENST00000496549 ZC2HC1BQ5TFG8 222 aa6.73□□□□□ -1.33
CRNKL1-205ENST00000496549 FAM27BQ5VT28 67 aa6.73□□□□□ -1.33
CRNKL1-205ENST00000496549 TCF19Q9Y242 345 aa6.73□□□□□ -1.33
CRNKL1-205ENST00000496549 XIRP2A4UGR9 3374 aa6.73□□□□□ -1.33
CRNKL1-205ENST00000496549 MYO7BQ6PIF6 2116 aa6.73□□□□□ -1.33
CRNKL1-205ENST00000496549 SMIM9A6NGZ8 99 aa6.73□□□□□ -1.33
CRNKL1-205ENST00000496549 C15orf62A8K5M9 175 aa6.73□□□□□ -1.33
CRNKL1-205ENST00000496549 IGKV1-39P01597 117 aa6.73□□□□□ -1.33
CRNKL1-205ENST00000496549 IGKV1D-39P04432 117 aa6.73□□□□□ -1.33
CRNKL1-205ENST00000496549 SLC25A48Q6ZT89 311 aaKnown RBP6.73□□□□□ -1.33
CRNKL1-205ENST00000496549 CIARTQ8N365 385 aaPredicted RBP6.73□□□□□ -1.33
CRNKL1-205ENST00000496549 OR1L8Q8NGR8 309 aa6.73□□□□□ -1.33
CRNKL1-205ENST00000496549 CCL4L1Q8NHW4 92 aa6.73□□□□□ -1.33
CRNKL1-205ENST00000496549 COQ2Q96H96 371 aa6.73□□□□□ -1.33
CRNKL1-205ENST00000496549 ZNF488Q96MN9 340 aa6.73□□□□□ -1.33
CRNKL1-205ENST00000496549 LRRK1Q38SD2 2015 aa6.73□□□□□ -1.33
CRNKL1-205ENST00000496549 DIDO1Q9BTC0 2240 aaKnown RBP6.73□□□□□ -1.33
CRNKL1-205ENST00000496549 IGKV1-27A0A075B6S5 117 aa6.73□□□□□ -1.33
CRNKL1-205ENST00000496549 CENPVL3A0A0U1RRI6 287 aa6.73□□□□□ -1.33
CRNKL1-205ENST00000496549 OOEPA6NGQ2 149 aa6.73□□□□□ -1.33
CRNKL1-205ENST00000496549 GGTLC3B5MD39 225 aa6.73□□□□□ -1.33
CRNKL1-205ENST00000496549 C21orf140B9A014 251 aa6.73□□□□□ -1.33
CRNKL1-205ENST00000496549 THBDP07204 575 aa6.73□□□□□ -1.33
CRNKL1-205ENST00000496549 CISD3P0C7P0 127 aa6.73□□□□□ -1.33
CRNKL1-205ENST00000496549 FOXB1Q99853 325 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms