RNA–Protein interactions for RNA: ENST00000496189.1

SF3A1-209, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-209ENST00000496189 TAS2R30P59541 319 aa12.39□□□□□ -0.43
SF3A1-209ENST00000496189 VAMP2P63027 116 aa12.39□□□□□ -0.43
SF3A1-209ENST00000496189 CYCSP99999 105 aaKnown RBP12.39□□□□□ -0.43
SF3A1-209ENST00000496189 BTNL8Q6UX41 500 aa12.39□□□□□ -0.43
SF3A1-209ENST00000496189 ZNF600Q6ZNG1 722 aa12.39□□□□□ -0.43
SF3A1-209ENST00000496189 TMEM170AQ8WVE7 144 aa12.39□□□□□ -0.43
SF3A1-209ENST00000496189 FNDC4Q9H6D8 234 aaPredicted RBP12.39□□□□□ -0.43
SF3A1-209ENST00000496189 TUBA4BQ9H853 241 aa12.39□□□□□ -0.43
SF3A1-209ENST00000496189 PSENENQ9NZ42 101 aa12.39□□□□□ -0.43
SF3A1-209ENST00000496189 TRAV25A0A0B4J276 109 aa12.38□□□□□ -0.43
SF3A1-209ENST00000496189 C7orf66A4D0T2 115 aa12.38□□□□□ -0.43
SF3A1-209ENST00000496189 GOSR2O14653 212 aa12.38□□□□□ -0.43
SF3A1-209ENST00000496189 CLN5O75503 358 aa12.38□□□□□ -0.43
SF3A1-209ENST00000496189 MBPP02686 304 aaPredicted RBP12.38□□□□□ -0.43
SF3A1-209ENST00000496189 CD81P60033 236 aa12.38□□□□□ -0.43
SF3A1-209ENST00000496189 C11orf87Q6NUJ2 197 aa12.38□□□□□ -0.43
SF3A1-209ENST00000496189 ADAMTSL5Q6ZMM2 481 aa12.38□□□□□ -0.43
SF3A1-209ENST00000496189 SLC35E1Q96K37 410 aa12.38□□□□□ -0.43
SF3A1-209ENST00000496189 IZUMO1RA6ND01 250 aa12.37□□□□□ -0.43
SF3A1-209ENST00000496189 TMEM50AO95807 157 aa12.37□□□□□ -0.43
SF3A1-209ENST00000496189 C8orf88P0DMB2 117 aa12.37□□□□□ -0.43
SF3A1-209ENST00000496189 MLANAQ16655 118 aa12.37□□□□□ -0.43
SF3A1-209ENST00000496189 PRSS54Q6PEW0 395 aa12.37□□□□□ -0.43
SF3A1-209ENST00000496189 TMEM116Q8NCL8 245 aa12.37□□□□□ -0.43
SF3A1-209ENST00000496189 NARS2Q96I59 477 aaKnown RBP12.37□□□□□ -0.43
SF3A1-209ENST00000496189 MLXQ9UH92 298 aa12.37□□□□□ -0.43
SF3A1-209ENST00000496189 LSM5Q9Y4Y9 91 aaKnown RBP12.37□□□□□ -0.43
SF3A1-209ENST00000496189 IGHV3OR16-8A0A075B7F1 116 aa12.36□□□□□ -0.43
SF3A1-209ENST00000496189 TRAV14DV4A0A0A6YYC5 116 aa12.36□□□□□ -0.43
SF3A1-209ENST00000496189 H3BP45 60 aa12.36□□□□□ -0.43
SF3A1-209ENST00000496189 TSC22D2O75157 780 aa12.36□□□□□ -0.43
SF3A1-209ENST00000496189 FRMD6-AS1P0C7T7 363 aa12.36□□□□□ -0.43
SF3A1-209ENST00000496189 IGHV4-30-4P0DP06 118 aa12.36□□□□□ -0.43
SF3A1-209ENST00000496189 EDN2P20800 178 aa12.36□□□□□ -0.43
SF3A1-209ENST00000496189 RND2P52198 227 aa12.36□□□□□ -0.43
SF3A1-209ENST00000496189 S100A10P60903 97 aa12.36□□□□□ -0.43
SF3A1-209ENST00000496189 TMEM61Q8N0U2 210 aa12.36□□□□□ -0.43
SF3A1-209ENST00000496189 OR1S2Q8NGQ3 325 aa12.36□□□□□ -0.43
SF3A1-209ENST00000496189 WDR89Q96FK6 387 aaPredicted RBP12.36□□□□□ -0.43
SF3A1-209ENST00000496189 ACY3Q96HD9 319 aa12.36□□□□□ -0.43
SF3A1-209ENST00000496189 NEURL2Q9BR09 285 aa12.36□□□□□ -0.43
SF3A1-209ENST00000496189 NMES1Q9C002 83 aa12.36□□□□□ -0.43
SF3A1-209ENST00000496189 K7EPK0 472 aa12.35□□□□□ -0.43
SF3A1-209ENST00000496189 ZNF207O43670 478 aaKnown RBP12.35□□□□□ -0.43
SF3A1-209ENST00000496189 SCAF4O95104 1147 aaKnown RBP12.35□□□□□ -0.43
SF3A1-209ENST00000496189 RLN2P04090 185 aa12.35□□□□□ -0.43
SF3A1-209ENST00000496189 CD5P06127 495 aa12.35□□□□□ -0.43
SF3A1-209ENST00000496189 NPIPB3Q92617 1050 aa12.35□□□□□ -0.43
SF3A1-209ENST00000496189 SPAG8Q99932 426 aaPredicted RBP12.35□□□□□ -0.43
SF3A1-209ENST00000496189 TMEM231Q9H6L2 316 aa12.35□□□□□ -0.43
SF3A1-209ENST00000496189 ZMAT4Q9H898 229 aa12.35□□□□□ -0.43
SF3A1-209ENST00000496189 MGAT4CQ9UBM8 478 aa12.35□□□□□ -0.43
SF3A1-209ENST00000496189 RCL1Q9Y2P8 373 aaKnown RBP12.35□□□□□ -0.43
SF3A1-209ENST00000496189 PUS1Q9Y606 427 aaKnown RBP eCLIP12.35□□□□□ -0.43
SF3A1-209ENST00000496189 ALG5Q9Y673 324 aa12.35□□□□□ -0.43
SF3A1-209ENST00000496189 IGHV7-4-1A0A0J9YVY3 117 aa12.34□□□□□ -0.43
SF3A1-209ENST00000496189 ZNF785A8K8V0 405 aa12.34□□□□□ -0.43
SF3A1-209ENST00000496189 A8MZ25 164 aa12.34□□□□□ -0.43
SF3A1-209ENST00000496189 FABP1P07148 127 aa12.34□□□□□ -0.43
SF3A1-209ENST00000496189 OR10J1P30954 320 aa12.34□□□□□ -0.43
SF3A1-209ENST00000496189 BCAP31P51572 246 aa12.34□□□□□ -0.43
SF3A1-209ENST00000496189 PAX9P55771 341 aa12.34□□□□□ -0.43
SF3A1-209ENST00000496189 Q8N1Y9 231 aa12.34□□□□□ -0.43
SF3A1-209ENST00000496189 Q8WTZ3 238 aa12.34□□□□□ -0.43
SF3A1-209ENST00000496189 ASCL2Q99929 193 aa12.34□□□□□ -0.43
SF3A1-209ENST00000496189 MRPL36Q9P0J6 103 aaKnown RBP12.34□□□□□ -0.43
SF3A1-209ENST00000496189 SMPXQ9UHP9 88 aa12.34□□□□□ -0.43
SF3A1-209ENST00000496189 A0A1W2PS18 150 aa12.33□□□□□ -0.44
SF3A1-209ENST00000496189 OR4C46A6NHA9 309 aa12.33□□□□□ -0.44
SF3A1-209ENST00000496189 SIX6O95475 246 aa12.33□□□□□ -0.44
SF3A1-209ENST00000496189 NPPCP23582 126 aa12.33□□□□□ -0.44
SF3A1-209ENST00000496189 PAFAH1B2P68402 229 aa12.33□□□□□ -0.44
SF3A1-209ENST00000496189 IL15RAQ13261 267 aa12.33□□□□□ -0.44
SF3A1-209ENST00000496189 RAB32Q13637 225 aa12.33□□□□□ -0.44
SF3A1-209ENST00000496189 GAMTQ14353 236 aa12.33□□□□□ -0.44
SF3A1-209ENST00000496189 OXA1LQ15070 435 aa12.33□□□□□ -0.44
SF3A1-209ENST00000496189 TOMM20LQ6UXN7 152 aa12.33□□□□□ -0.44
SF3A1-209ENST00000496189 OR10P1Q8NGE3 313 aa12.33□□□□□ -0.44
SF3A1-209ENST00000496189 METTL26Q96S19 204 aa12.33□□□□□ -0.44
SF3A1-209ENST00000496189 RHPN1-AS1Q9BWJ2 59 aa12.33□□□□□ -0.44
SF3A1-209ENST00000496189 MED28Q9H204 178 aa12.33□□□□□ -0.44
SF3A1-209ENST00000496189 SELENOKQ9Y6D0 94 aa12.33□□□□□ -0.44
SF3A1-209ENST00000496189 ZFP92A6NM28 416 aa12.32□□□□□ -0.44
SF3A1-209ENST00000496189 OR11H12B2RN74 326 aa12.32□□□□□ -0.44
SF3A1-209ENST00000496189 TSPAN4O14817 238 aa12.32□□□□□ -0.44
SF3A1-209ENST00000496189 METTL15P1P0C7V9 234 aa12.32□□□□□ -0.44
SF3A1-209ENST00000496189 IGLC1P0CG04 106 aa12.32□□□□□ -0.44
SF3A1-209ENST00000496189 CAV2P51636 162 aa12.32□□□□□ -0.44
SF3A1-209ENST00000496189 YPEL3P61236 119 aaPredicted RBP12.32□□□□□ -0.44
SF3A1-209ENST00000496189 TIGITQ495A1 244 aa12.32□□□□□ -0.44
SF3A1-209ENST00000496189 OR8G2PQ6IF36 304 aa12.32□□□□□ -0.44
SF3A1-209ENST00000496189 TMEM14EPQ6UXP3 125 aa12.32□□□□□ -0.44
SF3A1-209ENST00000496189 GRAMD2BQ96HH9 432 aa12.32□□□□□ -0.44
SF3A1-209ENST00000496189 IGKV1-17P01599 117 aa12.31□□□□□ -0.44
SF3A1-209ENST00000496189 CD7P09564 240 aa12.31□□□□□ -0.44
SF3A1-209ENST00000496189 PET100P0DJ07 73 aa12.31□□□□□ -0.44
SF3A1-209ENST00000496189 AKR1C1Q04828 323 aa12.31□□□□□ -0.44
SF3A1-209ENST00000496189 U3KQK5 164 aa12.31□□□□□ -0.44
SF3A1-209ENST00000496189 IGHV3-49A0A0A0MS15 119 aa12.3□□□□□ -0.44
SF3A1-209ENST00000496189 PRSS46E5RG02 174 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms