RNA–Protein interactions for RNA: ENST00000495688.5

PTPN7-217, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 2,689 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-217ENST00000495688 CACNG8Q8WXS5 425 aa10.5□□□□□ -0.73
PTPN7-217ENST00000495688 PAXXQ9BUH6 204 aa10.5□□□□□ -0.73
PTPN7-217ENST00000495688 SH3BGRL2Q9UJC5 107 aa10.5□□□□□ -0.73
PTPN7-217ENST00000495688 DPRXA6NFQ7 191 aa10.5□□□□□ -0.73
PTPN7-217ENST00000495688 NKX6-3A6NJ46 265 aa10.5□□□□□ -0.73
PTPN7-217ENST00000495688 C17orf100A8MU93 164 aa10.5□□□□□ -0.73
PTPN7-217ENST00000495688 SLC25A17O43808 307 aa10.5□□□□□ -0.73
PTPN7-217ENST00000495688 MOSP00540 346 aa10.5□□□□□ -0.73
PTPN7-217ENST00000495688 ZNF25P17030 456 aaPredicted RBP10.5□□□□□ -0.73
PTPN7-217ENST00000495688 CEACAM8P31997 349 aaPredicted RBP10.5□□□□□ -0.73
PTPN7-217ENST00000495688 GDF5OSQ5U4N7 250 aa10.5□□□□□ -0.73
PTPN7-217ENST00000495688 KCNS1Q96KK3 526 aa10.5□□□□□ -0.73
PTPN7-217ENST00000495688 ZNF586Q9NXT0 402 aa10.5□□□□□ -0.73
PTPN7-217ENST00000495688 ZNF318Q5VUA4 2279 aa10.49□□□□□ -0.73
PTPN7-217ENST00000495688 IGHV3-21A0A0B4J1V1 117 aa10.49□□□□□ -0.73
PTPN7-217ENST00000495688 IGLV2-23P01705 113 aa10.49□□□□□ -0.73
PTPN7-217ENST00000495688 USF1P22415 310 aaPredicted RBP10.49□□□□□ -0.73
PTPN7-217ENST00000495688 OR10J3Q5JRS4 329 aa10.49□□□□□ -0.73
PTPN7-217ENST00000495688 CYB5R2Q6BCY4 276 aa10.49□□□□□ -0.73
PTPN7-217ENST00000495688 HCP5Q6MZN7 132 aa10.49□□□□□ -0.73
PTPN7-217ENST00000495688 IGFL3Q6UXB1 125 aa10.49□□□□□ -0.73
PTPN7-217ENST00000495688 ZNF329Q86UD4 541 aa10.49□□□□□ -0.73
PTPN7-217ENST00000495688 OR4C13Q8NGP0 309 aa10.49□□□□□ -0.73
PTPN7-217ENST00000495688 MRPL32Q9BYC8 188 aaKnown RBP10.49□□□□□ -0.73
PTPN7-217ENST00000495688 SAP30LQ9HAJ7 183 aa10.49□□□□□ -0.73
PTPN7-217ENST00000495688 TLN1Q9Y490 2541 aaKnown RBP10.49□□□□□ -0.73
PTPN7-217ENST00000495688 CORTO00230 105 aa10.49□□□□□ -0.73
PTPN7-217ENST00000495688 FSTL3O95633 263 aa10.49□□□□□ -0.73
PTPN7-217ENST00000495688 APCSP02743 223 aa10.49□□□□□ -0.73
PTPN7-217ENST00000495688 TNFRSF1AP19438 455 aa10.49□□□□□ -0.73
PTPN7-217ENST00000495688 ORM2P19652 201 aa10.49□□□□□ -0.73
PTPN7-217ENST00000495688 NTF3P20783 257 aa10.49□□□□□ -0.73
PTPN7-217ENST00000495688 MFAP2P55001 183 aa10.49□□□□□ -0.73
PTPN7-217ENST00000495688 ATP5IP56385 69 aaPredicted RBP10.49□□□□□ -0.73
PTPN7-217ENST00000495688 BSPH1Q075Z2 132 aa10.49□□□□□ -0.73
PTPN7-217ENST00000495688 TMEM108Q6UXF1 575 aa10.49□□□□□ -0.73
PTPN7-217ENST00000495688 ZNF841Q6ZN19 808 aa10.49□□□□□ -0.73
PTPN7-217ENST00000495688 LINC00305Q7Z4B0 112 aa10.49□□□□□ -0.73
PTPN7-217ENST00000495688 NUDT10Q8NFP7 164 aa10.49□□□□□ -0.73
PTPN7-217ENST00000495688 TMEM167AQ8TBQ9 72 aa10.49□□□□□ -0.73
PTPN7-217ENST00000495688 BLNKQ8WV28 456 aa10.49□□□□□ -0.73
PTPN7-217ENST00000495688 FXYD5Q96DB9 178 aa10.49□□□□□ -0.73
PTPN7-217ENST00000495688 NUDT11Q96G61 164 aa10.49□□□□□ -0.73
PTPN7-217ENST00000495688 SSBP4Q9BWG4 385 aaPredicted RBP10.49□□□□□ -0.73
PTPN7-217ENST00000495688 WNT10AQ9GZT5 417 aa10.49□□□□□ -0.73
PTPN7-217ENST00000495688 A0A1W2PPI3 338 aa10.48□□□□□ -0.73
PTPN7-217ENST00000495688 IZUMO1RA6ND01 250 aa10.48□□□□□ -0.73
PTPN7-217ENST00000495688 PEX7O00628 323 aa10.48□□□□□ -0.73
PTPN7-217ENST00000495688 HLA-DQA1P01909 254 aa10.48□□□□□ -0.73
PTPN7-217ENST00000495688 GPR6P46095 362 aaPredicted RBP10.48□□□□□ -0.73
PTPN7-217ENST00000495688 NIT1Q86X76 327 aa10.48□□□□□ -0.73
PTPN7-217ENST00000495688 TSKUQ8WUA8 353 aa10.48□□□□□ -0.73
PTPN7-217ENST00000495688 TMEM68Q96MH6 324 aa10.48□□□□□ -0.73
PTPN7-217ENST00000495688 RPH3ALQ9UNE2 315 aa10.48□□□□□ -0.73
PTPN7-217ENST00000495688 MALRD1Q5VYJ5 2156 aa10.48□□□□□ -0.73
PTPN7-217ENST00000495688 TCRBV4S1A1TA0A5B7 111 aa10.48□□□□□ -0.73
PTPN7-217ENST00000495688 VWC2LB2RUY7 222 aa10.48□□□□□ -0.73
PTPN7-217ENST00000495688 C22orf46C9J442 243 aa10.48□□□□□ -0.73
PTPN7-217ENST00000495688 H3BTX0 84 aa10.48□□□□□ -0.73
PTPN7-217ENST00000495688 ZNF324O75467 553 aaPredicted RBP10.48□□□□□ -0.73
PTPN7-217ENST00000495688 RPL19P84098 196 aaKnown RBP10.48□□□□□ -0.73
PTPN7-217ENST00000495688 ATOH7Q8N100 152 aa10.48□□□□□ -0.73
PTPN7-217ENST00000495688 NUP37Q8NFH4 326 aa10.48□□□□□ -0.73
PTPN7-217ENST00000495688 NUP35Q8NFH5 326 aa10.48□□□□□ -0.73
PTPN7-217ENST00000495688 ZNF331Q9NQX6 463 aaPredicted RBP10.48□□□□□ -0.73
PTPN7-217ENST00000495688 CTSZQ9UBR2 303 aa10.48□□□□□ -0.73
PTPN7-217ENST00000495688 PPIAL4EA0A075B759 164 aa10.47□□□□□ -0.73
PTPN7-217ENST00000495688 A0A0G2JNJ9 132 aa10.47□□□□□ -0.73
PTPN7-217ENST00000495688 PPIAL4DF5H284 164 aa10.47□□□□□ -0.73
PTPN7-217ENST00000495688 C3orf79P0CE67 100 aa10.47□□□□□ -0.73
PTPN7-217ENST00000495688 PPIAL4FP0DN26 164 aa10.47□□□□□ -0.73
PTPN7-217ENST00000495688 MEF2CQ06413 473 aaPredicted RBP10.47□□□□□ -0.73
PTPN7-217ENST00000495688 TMEM30BQ3MIR4 351 aa10.47□□□□□ -0.73
PTPN7-217ENST00000495688 SPACA3Q8IXA5 215 aa10.47□□□□□ -0.73
PTPN7-217ENST00000495688 C18orf32Q8TCD1 76 aa10.47□□□□□ -0.73
PTPN7-217ENST00000495688 Q9UFV3 132 aa10.47□□□□□ -0.73
PTPN7-217ENST00000495688 PPIAL4AQ9Y536 164 aa10.47□□□□□ -0.73
PTPN7-217ENST00000495688 TMEM178BH3BS89 294 aa10.47□□□□□ -0.73
PTPN7-217ENST00000495688 ENSAO43768 121 aaKnown RBP10.47□□□□□ -0.73
PTPN7-217ENST00000495688 CAMPP49913 170 aa10.47□□□□□ -0.73
PTPN7-217ENST00000495688 MRGPRG-AS1Q2M3A8 158 aa10.47□□□□□ -0.73
PTPN7-217ENST00000495688 MAJINQ3KP22 176 aa10.47□□□□□ -0.73
PTPN7-217ENST00000495688 LEMD1Q68G75 181 aa10.47□□□□□ -0.73
PTPN7-217ENST00000495688 ST6GALNAC6Q969X2 333 aa10.47□□□□□ -0.73
PTPN7-217ENST00000495688 MBD6Q96DN6 1003 aa10.47□□□□□ -0.73
PTPN7-217ENST00000495688 A0A1W2PN81 502 aa10.46□□□□□ -0.73
PTPN7-217ENST00000495688 THBDP07204 575 aa10.46□□□□□ -0.73
PTPN7-217ENST00000495688 CNTFRP26992 372 aa10.46□□□□□ -0.73
PTPN7-217ENST00000495688 TFPI2P48307 235 aa10.46□□□□□ -0.73
PTPN7-217ENST00000495688 LCN12Q6JVE5 192 aa10.46□□□□□ -0.73
PTPN7-217ENST00000495688 OR1B1Q8NGR6 318 aa10.46□□□□□ -0.73
PTPN7-217ENST00000495688 FAM57AQ8TBR7 257 aa10.46□□□□□ -0.73
PTPN7-217ENST00000495688 RNF2Q99496 336 aa10.46□□□□□ -0.73
PTPN7-217ENST00000495688 GSX1Q9H4S2 264 aaPredicted RBP10.46□□□□□ -0.73
PTPN7-217ENST00000495688 ABCA4P78363 2273 aa10.46□□□□□ -0.73
PTPN7-217ENST00000495688 PTPRZ1P23471 2315 aaPredicted RBP10.46□□□□□ -0.74
PTPN7-217ENST00000495688 HIGD1CA8MV81 97 aa10.46□□□□□ -0.74
PTPN7-217ENST00000495688 C16orf97H3BN30 126 aa10.46□□□□□ -0.74
PTPN7-217ENST00000495688 RPLP1P05386 114 aaKnown RBP10.46□□□□□ -0.74
PTPN7-217ENST00000495688 CTRLP40313 264 aa10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms