RNA–Protein interactions for RNA: ENST00000495122.1

CBX4-204, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 490 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-204ENST00000495122 BRS3P32247 399 aa12.93□□□□□ -0.34
CBX4-204ENST00000495122 DLX1P56177 255 aa12.93□□□□□ -0.34
CBX4-204ENST00000495122 BPIFB3P59826 476 aa12.93□□□□□ -0.34
CBX4-204ENST00000495122 CD81P60033 236 aa12.93□□□□□ -0.34
CBX4-204ENST00000495122 LCN2P80188 198 aa12.93□□□□□ -0.34
CBX4-204ENST00000495122 KLRD1Q13241 179 aa12.93□□□□□ -0.34
CBX4-204ENST00000495122 C5orf64Q2M2E5 130 aa12.93□□□□□ -0.34
CBX4-204ENST00000495122 LDLRAD2Q5SZI1 272 aa12.93□□□□□ -0.34
CBX4-204ENST00000495122 PQLC2Q6ZP29 291 aa12.93□□□□□ -0.34
CBX4-204ENST00000495122 Q8N6K4 173 aa12.93□□□□□ -0.34
CBX4-204ENST00000495122 TMEM116Q8NCL8 245 aa12.93□□□□□ -0.34
CBX4-204ENST00000495122 FBXL15Q9H469 300 aa12.93□□□□□ -0.34
CBX4-204ENST00000495122 TMEM242Q9NWH2 141 aa12.93□□□□□ -0.34
CBX4-204ENST00000495122 TECRQ9NZ01 308 aaKnown RBP12.93□□□□□ -0.34
CBX4-204ENST00000495122 C1RLQ9NZP8 487 aa12.93□□□□□ -0.34
CBX4-204ENST00000495122 NAT8Q9UHE5 227 aa12.93□□□□□ -0.34
CBX4-204ENST00000495122 PUS1Q9Y606 427 aaKnown RBP eCLIP12.93□□□□□ -0.34
CBX4-204ENST00000495122 CNTFRP26992 372 aa12.92□□□□□ -0.34
CBX4-204ENST00000495122 SRP14P37108 136 aaKnown RBP12.92□□□□□ -0.34
CBX4-204ENST00000495122 CBLN2Q8IUK8 224 aa12.92□□□□□ -0.34
CBX4-204ENST00000495122 TBX15Q96SF7 602 aa12.92□□□□□ -0.34
CBX4-204ENST00000495122 TRGV9Q99603 122 aa12.92□□□□□ -0.34
CBX4-204ENST00000495122 HIF1ANQ9NWT6 349 aa12.92□□□□□ -0.34
CBX4-204ENST00000495122 HILPDAQ9Y5L2 63 aa12.92□□□□□ -0.34
CBX4-204ENST00000495122 IGKV1OR2-108A0A075B7D4 117 aa12.91□□□□□ -0.34
CBX4-204ENST00000495122 C11orf94C9JXX5 98 aa12.91□□□□□ -0.34
CBX4-204ENST00000495122 TCF21O43680 179 aa12.91□□□□□ -0.34
CBX4-204ENST00000495122 FABP1P07148 127 aa12.91□□□□□ -0.34
CBX4-204ENST00000495122 FAM106CPP0CH98 169 aa12.91□□□□□ -0.34
CBX4-204ENST00000495122 ARL14EPLP0DKL9 152 aa12.91□□□□□ -0.34
CBX4-204ENST00000495122 FOLR2P14207 255 aa12.91□□□□□ -0.34
CBX4-204ENST00000495122 GCSAMLQ5JQS6 135 aa12.91□□□□□ -0.34
CBX4-204ENST00000495122 TMEM88Q6PEY1 159 aa12.91□□□□□ -0.34
CBX4-204ENST00000495122 LHFPL4Q7Z7J7 247 aa12.91□□□□□ -0.34
CBX4-204ENST00000495122 ABHD5Q8WTS1 349 aa12.91□□□□□ -0.34
CBX4-204ENST00000495122 TMEM190Q8WZ59 177 aa12.91□□□□□ -0.34
CBX4-204ENST00000495122 FNDC4Q9H6D8 234 aaPredicted RBP12.91□□□□□ -0.34
CBX4-204ENST00000495122 SDF2L1Q9HCN8 221 aa12.91□□□□□ -0.34
CBX4-204ENST00000495122 TENM1Q9UKZ4 2725 aa12.9□□□□□ -0.34
CBX4-204ENST00000495122 ELOA3CA0A087WX78 387 aaPredicted RBP12.9□□□□□ -0.34
CBX4-204ENST00000495122 ZNF727A8MUV8 499 aa12.9□□□□□ -0.34
CBX4-204ENST00000495122 NUPL2O15504 423 aaKnown RBP12.9□□□□□ -0.34
CBX4-204ENST00000495122 PAGE4O60829 102 aa12.9□□□□□ -0.34
CBX4-204ENST00000495122 CNIH1O95406 144 aa12.9□□□□□ -0.34
CBX4-204ENST00000495122 MT-ND4LP03901 98 aa12.9□□□□□ -0.34
CBX4-204ENST00000495122 AREGP15514 252 aa12.9□□□□□ -0.34
CBX4-204ENST00000495122 GCHFRP30047 84 aa12.9□□□□□ -0.34
CBX4-204ENST00000495122 GNB1P62873 340 aa12.9□□□□□ -0.34
CBX4-204ENST00000495122 PAX8Q06710 450 aa12.9□□□□□ -0.34
CBX4-204ENST00000495122 RNF212Q495C1 297 aa12.9□□□□□ -0.34
CBX4-204ENST00000495122 ZNF562Q6V9R5 426 aa12.9□□□□□ -0.34
CBX4-204ENST00000495122 IQCF2Q8IXL9 164 aa12.9□□□□□ -0.34
CBX4-204ENST00000495122 OR4F5Q8NH21 305 aa12.9□□□□□ -0.34
CBX4-204ENST00000495122 ACY3Q96HD9 319 aa12.9□□□□□ -0.34
CBX4-204ENST00000495122 OR4F4Q96R69 305 aa12.9□□□□□ -0.34
CBX4-204ENST00000495122 SMIM7Q9BQ49 75 aa12.9□□□□□ -0.34
CBX4-204ENST00000495122 CTDSP1Q9GZU7 261 aa12.9□□□□□ -0.34
CBX4-204ENST00000495122 TMPRSS5Q9H3S3 457 aa12.9□□□□□ -0.34
CBX4-204ENST00000495122 TRAV20A0A0B4J274 112 aa12.89□□□□□ -0.35
CBX4-204ENST00000495122 NPIPB5A8MRT5 1133 aa12.89□□□□□ -0.35
CBX4-204ENST00000495122 HMGB3O15347 200 aaKnown RBP12.89□□□□□ -0.35
CBX4-204ENST00000495122 CTRB1P17538 263 aa12.89□□□□□ -0.35
CBX4-204ENST00000495122 CEBPGP53567 150 aa12.89□□□□□ -0.35
CBX4-204ENST00000495122 SSBP2P81877 361 aaPredicted RBP12.89□□□□□ -0.35
CBX4-204ENST00000495122 HES1Q14469 280 aa12.89□□□□□ -0.35
CBX4-204ENST00000495122 TMEM241Q24JQ0 296 aa12.89□□□□□ -0.35
CBX4-204ENST00000495122 FAM78BQ5VT40 261 aa12.89□□□□□ -0.35
CBX4-204ENST00000495122 CTRB2Q6GPI1 263 aa12.89□□□□□ -0.35
CBX4-204ENST00000495122 OR2T6Q8NHC8 308 aa12.89□□□□□ -0.35
CBX4-204ENST00000495122 C17orf50Q8WW18 174 aa12.89□□□□□ -0.35
CBX4-204ENST00000495122 DOK5Q9P104 306 aa12.89□□□□□ -0.35
CBX4-204ENST00000495122 PSMB11A5LHX3 300 aa12.88□□□□□ -0.35
CBX4-204ENST00000495122 C8orf88P0DMB2 117 aa12.88□□□□□ -0.35
CBX4-204ENST00000495122 RND2P52198 227 aa12.88□□□□□ -0.35
CBX4-204ENST00000495122 PLP1P60201 277 aa12.88□□□□□ -0.35
CBX4-204ENST00000495122 PRB3Q04118 309 aaPredicted RBP12.88□□□□□ -0.35
CBX4-204ENST00000495122 STXBP6Q8NFX7 210 aa12.88□□□□□ -0.35
CBX4-204ENST00000495122 NPIPB3Q92617 1050 aa12.88□□□□□ -0.35
CBX4-204ENST00000495122 MISP3Q96FF7 219 aa12.88□□□□□ -0.35
CBX4-204ENST00000495122 UHRF2Q96PU4 802 aa12.88□□□□□ -0.35
CBX4-204ENST00000495122 SEPSECSQ9HD40 501 aaKnown RBP12.88□□□□□ -0.35
CBX4-204ENST00000495122 DNAJC4Q9NNZ3 241 aa12.88□□□□□ -0.35
CBX4-204ENST00000495122 IGKV1D-37A0A075B6S9 117 aa12.87□□□□□ -0.35
CBX4-204ENST00000495122 COLCA2A8K830 154 aa12.87□□□□□ -0.35
CBX4-204ENST00000495122 NPFFO15130 113 aa12.87□□□□□ -0.35
CBX4-204ENST00000495122 COX7A2P2O60397 106 aa12.87□□□□□ -0.35
CBX4-204ENST00000495122 HLA-DRB1P01911 266 aa12.87□□□□□ -0.35
CBX4-204ENST00000495122 TMEM11P17152 192 aa12.87□□□□□ -0.35
CBX4-204ENST00000495122 ATF4P18848 351 aaPredicted RBP12.87□□□□□ -0.35
CBX4-204ENST00000495122 GATA3P23771 443 aa12.87□□□□□ -0.35
CBX4-204ENST00000495122 FLI1Q01543 452 aaPredicted RBP12.87□□□□□ -0.35
CBX4-204ENST00000495122 FXYD3Q14802 87 aa12.87□□□□□ -0.35
CBX4-204ENST00000495122 OR4X1Q8NH49 305 aa12.87□□□□□ -0.35
CBX4-204ENST00000495122 C11orf52Q96A22 123 aa12.87□□□□□ -0.35
CBX4-204ENST00000495122 ZNF48Q96MX3 618 aaPredicted RBP12.87□□□□□ -0.35
CBX4-204ENST00000495122 TCEAL7Q9BRU2 100 aa12.87□□□□□ -0.35
CBX4-204ENST00000495122 SLC25A33Q9BSK2 321 aa12.87□□□□□ -0.35
CBX4-204ENST00000495122 PARLQ9H300 379 aa12.87□□□□□ -0.35
CBX4-204ENST00000495122 TNFRSF19Q9NS68 423 aa12.87□□□□□ -0.35
CBX4-204ENST00000495122 FCN1O00602 326 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms