RNA–Protein interactions for RNA: ENST00000494852.1

COL4A2-209, Transcript of collagen type IV alpha 2 chain, humanhuman

TSL 3

Gene COL4A2, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-209ENST00000494852 MFAP4P55083 255 aa11.55□□□□□ -0.56
COL4A2-209ENST00000494852 SPCS3P61009 180 aa11.55□□□□□ -0.56
COL4A2-209ENST00000494852 SUPT4H1P63272 117 aaKnown RBP11.55□□□□□ -0.56
COL4A2-209ENST00000494852 FAM90A2PQ658T7 463 aa11.55□□□□□ -0.56
COL4A2-209ENST00000494852 TMEM116Q8NCL8 245 aa11.55□□□□□ -0.56
COL4A2-209ENST00000494852 PINX1Q96BK5 328 aaKnown RBP11.55□□□□□ -0.56
COL4A2-209ENST00000494852 OR10C1Q96KK4 312 aa11.55□□□□□ -0.56
COL4A2-209ENST00000494852 RNASE2P10153 161 aaKnown RBP11.54□□□□□ -0.56
COL4A2-209ENST00000494852 SUB1P53999 127 aaKnown RBP eCLIP11.54□□□□□ -0.56
COL4A2-209ENST00000494852 RELQ04864 619 aaPredicted RBP11.54□□□□□ -0.56
COL4A2-209ENST00000494852 Q8NAQ8 132 aa11.54□□□□□ -0.56
COL4A2-209ENST00000494852 ZNF414Q96IQ9 312 aa11.54□□□□□ -0.56
COL4A2-209ENST00000494852 ENY2Q9NPA8 101 aa11.54□□□□□ -0.56
COL4A2-209ENST00000494852 PRR13Q9NZ81 148 aa11.54□□□□□ -0.56
COL4A2-209ENST00000494852 NDUFA13Q9P0J0 144 aa11.54□□□□□ -0.56
COL4A2-209ENST00000494852 CACNG5Q9UF02 275 aa11.54□□□□□ -0.56
COL4A2-209ENST00000494852 DNAH11Q96DT5 4516 aa11.54□□□□□ -0.56
COL4A2-209ENST00000494852 PKD1P98161 4303 aa11.54□□□□□ -0.56
COL4A2-209ENST00000494852 CORTO00230 105 aa11.53□□□□□ -0.56
COL4A2-209ENST00000494852 NUPL2O15504 423 aaKnown RBP11.53□□□□□ -0.56
COL4A2-209ENST00000494852 IGHV3-48P01763 117 aa11.53□□□□□ -0.56
COL4A2-209ENST00000494852 CD5P06127 495 aa11.53□□□□□ -0.56
COL4A2-209ENST00000494852 PAFAH1B2P68402 229 aa11.53□□□□□ -0.56
COL4A2-209ENST00000494852 BSXQ3C1V8 233 aa11.53□□□□□ -0.56
COL4A2-209ENST00000494852 SLC25A21Q9BQT8 299 aaPredicted RBP11.53□□□□□ -0.56
COL4A2-209ENST00000494852 DYNC1H1Q14204 4646 aaKnown RBP11.53□□□□□ -0.56
COL4A2-209ENST00000494852 IGKV3-7A0A075B6H7 116 aa11.52□□□□□ -0.57
COL4A2-209ENST00000494852 IGHV4-4A0A075B6R2 117 aa11.52□□□□□ -0.57
COL4A2-209ENST00000494852 TRAV14DV4A0A0A6YYC5 116 aa11.52□□□□□ -0.57
COL4A2-209ENST00000494852 A0A0B4J2A0 478 aa11.52□□□□□ -0.57
COL4A2-209ENST00000494852 DFFBO76075 338 aa11.52□□□□□ -0.57
COL4A2-209ENST00000494852 ANXA3P12429 323 aa11.52□□□□□ -0.57
COL4A2-209ENST00000494852 BAK1Q16611 211 aa11.52□□□□□ -0.57
COL4A2-209ENST00000494852 TMEM128Q5BJH2 165 aa11.52□□□□□ -0.57
COL4A2-209ENST00000494852 TMED4Q7Z7H5 227 aa11.52□□□□□ -0.57
COL4A2-209ENST00000494852 LGI3Q8N145 548 aa11.52□□□□□ -0.57
COL4A2-209ENST00000494852 DUSP18Q8NEJ0 188 aa11.52□□□□□ -0.57
COL4A2-209ENST00000494852 CACFD1Q9UGQ2 172 aa11.52□□□□□ -0.57
COL4A2-209ENST00000494852 SHPKQ9UHJ6 478 aa11.52□□□□□ -0.57
COL4A2-209ENST00000494852 MUC4Q99102 2169 aa11.52□□□□□ -0.57
COL4A2-209ENST00000494852 TRAV10A0A0B4J240 114 aa11.51□□□□□ -0.57
COL4A2-209ENST00000494852 PRSS29PA6NIE9 313 aa11.51□□□□□ -0.57
COL4A2-209ENST00000494852 GNG7O60262 68 aa11.51□□□□□ -0.57
COL4A2-209ENST00000494852 RBMY1A1P0DJD3 496 aaKnown RBP11.51□□□□□ -0.57
COL4A2-209ENST00000494852 RBMY1CP0DJD4 496 aa11.51□□□□□ -0.57
COL4A2-209ENST00000494852 SULT1A3P0DMM9 295 aa11.51□□□□□ -0.57
COL4A2-209ENST00000494852 SULT1A4P0DMN0 295 aa11.51□□□□□ -0.57
COL4A2-209ENST00000494852 HLA-DMBP28068 263 aa11.51□□□□□ -0.57
COL4A2-209ENST00000494852 HTR2BP41595 481 aa11.51□□□□□ -0.57
COL4A2-209ENST00000494852 NPBWR1P48145 328 aa11.51□□□□□ -0.57
COL4A2-209ENST00000494852 SRPXP78539 464 aa11.51□□□□□ -0.57
COL4A2-209ENST00000494852 RBMY1FQ15415 496 aaKnown RBP11.51□□□□□ -0.57
COL4A2-209ENST00000494852 NMSQ5H8A3 153 aa11.51□□□□□ -0.57
COL4A2-209ENST00000494852 LYZL2Q7Z4W2 148 aa11.51□□□□□ -0.57
COL4A2-209ENST00000494852 GBGT1Q8N5D6 347 aa11.51□□□□□ -0.57
COL4A2-209ENST00000494852 IGHV3-49A0A0A0MS15 119 aa11.5□□□□□ -0.57
COL4A2-209ENST00000494852 CEBPZOSA8MTT3 80 aa11.5□□□□□ -0.57
COL4A2-209ENST00000494852 YIF1AO95070 293 aa11.5□□□□□ -0.57
COL4A2-209ENST00000494852 MIFP14174 115 aa11.5□□□□□ -0.57
COL4A2-209ENST00000494852 CCR6P51684 374 aa11.5□□□□□ -0.57
COL4A2-209ENST00000494852 TMEM41BQ5BJD5 291 aa11.5□□□□□ -0.57
COL4A2-209ENST00000494852 Q6ZTC4 211 aa11.5□□□□□ -0.57
COL4A2-209ENST00000494852 SDHCQ99643 169 aaPredicted RBP11.5□□□□□ -0.57
COL4A2-209ENST00000494852 RNF126Q9BV68 326 aa11.5□□□□□ -0.57
COL4A2-209ENST00000494852 FNDC4Q9H6D8 234 aaPredicted RBP11.5□□□□□ -0.57
COL4A2-209ENST00000494852 HEYLQ9NQ87 328 aaPredicted RBP11.5□□□□□ -0.57
COL4A2-209ENST00000494852 TRAV2A0A0B4J234 112 aa11.49□□□□□ -0.57
COL4A2-209ENST00000494852 PIGBOS1A0A0B4J2F0 54 aa11.49□□□□□ -0.57
COL4A2-209ENST00000494852 IGHV4-28A0A0C4DH34 117 aa11.49□□□□□ -0.57
COL4A2-209ENST00000494852 RTL8CO15255 209 aa11.49□□□□□ -0.57
COL4A2-209ENST00000494852 TMEM50AO95807 157 aa11.49□□□□□ -0.57
COL4A2-209ENST00000494852 OPRK1P41145 380 aa11.49□□□□□ -0.57
COL4A2-209ENST00000494852 SMCO1Q147U7 214 aa11.49□□□□□ -0.57
COL4A2-209ENST00000494852 MLANAQ16655 118 aa11.49□□□□□ -0.57
COL4A2-209ENST00000494852 C2orf83Q53S99 150 aa11.49□□□□□ -0.57
COL4A2-209ENST00000494852 TRIQKQ629K1 86 aa11.49□□□□□ -0.57
COL4A2-209ENST00000494852 TCF24Q7RTU0 167 aa11.49□□□□□ -0.57
COL4A2-209ENST00000494852 CENPSQ8N2Z9 138 aa11.49□□□□□ -0.57
COL4A2-209ENST00000494852 MS4A6AQ9H2W1 248 aa11.49□□□□□ -0.57
COL4A2-209ENST00000494852 DUXBA0A1W2PPF3 345 aa11.48□□□□□ -0.57
COL4A2-209ENST00000494852 NAP1L6A6NFF2 107 aa11.48□□□□□ -0.57
COL4A2-209ENST00000494852 ZNF705EA8MWA4 302 aaPredicted RBP11.48□□□□□ -0.57
COL4A2-209ENST00000494852 NXPH3O95157 252 aa11.48□□□□□ -0.57
COL4A2-209ENST00000494852 GIG44P09565 113 aaPredicted RBP11.48□□□□□ -0.57
COL4A2-209ENST00000494852 INPP1P49441 399 aa11.48□□□□□ -0.57
COL4A2-209ENST00000494852 DEFB131AP59861 70 aa11.48□□□□□ -0.57
COL4A2-209ENST00000494852 LEMD1Q68G75 181 aa11.48□□□□□ -0.57
COL4A2-209ENST00000494852 STHQ8IWL8 128 aa11.48□□□□□ -0.57
COL4A2-209ENST00000494852 POM121L12Q8N7R1 296 aa11.48□□□□□ -0.57
COL4A2-209ENST00000494852 LRTM2Q8N967 370 aa11.48□□□□□ -0.57
COL4A2-209ENST00000494852 SLC24A4Q8NFF2 622 aa11.48□□□□□ -0.57
COL4A2-209ENST00000494852 OR4X1Q8NH49 305 aa11.48□□□□□ -0.57
COL4A2-209ENST00000494852 VSIRQ9H7M9 311 aa11.48□□□□□ -0.57
COL4A2-209ENST00000494852 MRPL36Q9P0J6 103 aaKnown RBP11.48□□□□□ -0.57
COL4A2-209ENST00000494852 HSPB7Q9UBY9 170 aa11.48□□□□□ -0.57
COL4A2-209ENST00000494852 IGHV3OR16-13A0A075B7E8 117 aa11.47□□□□□ -0.57
COL4A2-209ENST00000494852 IGHV3-74A0A0B4J1X5 117 aa11.47□□□□□ -0.57
COL4A2-209ENST00000494852 A0A1B0GU03 582 aa11.47□□□□□ -0.57
COL4A2-209ENST00000494852 DNASE2O00115 360 aaPredicted RBP11.47□□□□□ -0.57
COL4A2-209ENST00000494852 CLN5O75503 358 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms