RNA–Protein interactions for RNA: ENST00000494618.1

NCL-210, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 910 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-210ENST00000494618 CCDC90BQ9GZT6 254 aa1.13□□□□□ -2.23
NCL-210ENST00000494618 SLC39A9Q9NUM3 307 aa1.13□□□□□ -2.23
NCL-210ENST00000494618 NHP2Q9NX24 153 aaKnown RBP1.13□□□□□ -2.23
NCL-210ENST00000494618 MRPL27Q9P0M9 148 aaKnown RBP1.13□□□□□ -2.23
NCL-210ENST00000494618 MAP3K4Q9Y6R4 1608 aa1.13□□□□□ -2.23
NCL-210ENST00000494618 CASP8AP2Q9UKL3 1982 aa1.13□□□□□ -2.23
NCL-210ENST00000494618 ERICH3Q5RHP9 1530 aa1.13□□□□□ -2.23
NCL-210ENST00000494618 KIAA1107Q9UPP5 1409 aa1.13□□□□□ -2.23
NCL-210ENST00000494618 NCOA3Q9Y6Q9 1424 aa1.13□□□□□ -2.23
NCL-210ENST00000494618 DSCAMO60469 2012 aa1.13□□□□□ -2.23
NCL-210ENST00000494618 KDM5AP29375 1690 aaKnown RBP1.13□□□□□ -2.23
NCL-210ENST00000494618 JMJD1CQ15652 2540 aa1.13□□□□□ -2.23
NCL-210ENST00000494618 PCLOQ9Y6V0 5065 aa1.13□□□□□ -2.23
NCL-210ENST00000494618 REREQ9P2R6 1566 aa1.13□□□□□ -2.23
NCL-210ENST00000494618 SPG11Q96JI7 2443 aa1.13□□□□□ -2.23
NCL-210ENST00000494618 DNHD1Q96M86 4753 aa1.12□□□□□ -2.23
NCL-210ENST00000494618 POLQO75417 2590 aa1.12□□□□□ -2.23
NCL-210ENST00000494618 WDR7Q9Y4E6 1490 aa1.12□□□□□ -2.23
NCL-210ENST00000494618 POLR1AO95602 1720 aaPredicted RBP1.12□□□□□ -2.23
NCL-210ENST00000494618 MYH11P35749 1972 aa1.12□□□□□ -2.23
NCL-210ENST00000494618 CFAP46Q8IYW2 2715 aa1.12□□□□□ -2.23
NCL-210ENST00000494618 REV3LO60673 3130 aa1.12□□□□□ -2.23
NCL-210ENST00000494618 EFCAB6Q5THR3 1501 aa1.12□□□□□ -2.23
NCL-210ENST00000494618 KIAA0586Q9BVV6 1533 aa1.12□□□□□ -2.23
NCL-210ENST00000494618 EXOC1LA0A1B0GW35 172 aa1.12□□□□□ -2.23
NCL-210ENST00000494618 DPRXA6NFQ7 191 aa1.12□□□□□ -2.23
NCL-210ENST00000494618 OR4C46A6NHA9 309 aa1.12□□□□□ -2.23
NCL-210ENST00000494618 PIRO00625 290 aa1.12□□□□□ -2.23
NCL-210ENST00000494618 CHP2O43745 196 aa1.12□□□□□ -2.23
NCL-210ENST00000494618 RBP1P09455 135 aa1.12□□□□□ -2.23
NCL-210ENST00000494618 BASP1P80723 227 aaKnown RBP1.12□□□□□ -2.23
NCL-210ENST00000494618 DR1Q01658 176 aa1.12□□□□□ -2.23
NCL-210ENST00000494618 SPCS2Q15005 226 aa1.12□□□□□ -2.23
NCL-210ENST00000494618 LCN15Q6UWW0 184 aa1.12□□□□□ -2.23
NCL-210ENST00000494618 MIR17HGQ75NE6 70 aa1.12□□□□□ -2.23
NCL-210ENST00000494618 OR4E2Q8NGC2 313 aa1.12□□□□□ -2.23
NCL-210ENST00000494618 PFN4Q8NHR9 129 aa1.12□□□□□ -2.23
NCL-210ENST00000494618 RETNLBQ9BQ08 111 aa1.12□□□□□ -2.23
NCL-210ENST00000494618 CTNNBIP1Q9NSA3 81 aaPredicted RBP1.12□□□□□ -2.23
NCL-210ENST00000494618 CTTNBP2Q8WZ74 1663 aa1.12□□□□□ -2.23
NCL-210ENST00000494618 PPIP5K1Q6PFW1 1433 aa1.12□□□□□ -2.23
NCL-210ENST00000494618 RRBP1Q9P2E9 1410 aaKnown RBP1.12□□□□□ -2.23
NCL-210ENST00000494618 ACACBO00763 2458 aa1.12□□□□□ -2.23
NCL-210ENST00000494618 GLI2P10070 1586 aa1.12□□□□□ -2.23
NCL-210ENST00000494618 CCDC171Q6TFL3 1326 aa1.12□□□□□ -2.23
NCL-210ENST00000494618 ARHGEF28Q8N1W1 1705 aaKnown RBP1.12□□□□□ -2.23
NCL-210ENST00000494618 NAV1Q8NEY1 1877 aa1.12□□□□□ -2.23
NCL-210ENST00000494618 IFT140Q96RY7 1462 aa1.12□□□□□ -2.23
NCL-210ENST00000494618 ROCK1Q13464 1354 aa1.11□□□□□ -2.23
NCL-210ENST00000494618 SPTAN1Q13813 2472 aaKnown RBP1.11□□□□□ -2.23
NCL-210ENST00000494618 CCNB3Q8WWL7 1395 aa1.11□□□□□ -2.23
NCL-210ENST00000494618 WDFY4Q6ZS81 3184 aa1.11□□□□□ -2.23
NCL-210ENST00000494618 SHPRHQ149N8 1683 aa1.11□□□□□ -2.23
NCL-210ENST00000494618 CHD2O14647 1828 aaKnown RBP1.11□□□□□ -2.23
NCL-210ENST00000494618 TRAV14DV4A0A0A6YYC5 116 aa1.11□□□□□ -2.23
NCL-210ENST00000494618 TRAPPC2LH3BP13 241 aa1.11□□□□□ -2.23
NCL-210ENST00000494618 FAAHO00519 579 aa1.11□□□□□ -2.23
NCL-210ENST00000494618 SULT1B1O43704 296 aa1.11□□□□□ -2.23
NCL-210ENST00000494618 OR2B3O76000 313 aa1.11□□□□□ -2.23
NCL-210ENST00000494618 S100A4P26447 101 aaKnown RBP1.11□□□□□ -2.23
NCL-210ENST00000494618 G6PCP35575 357 aa1.11□□□□□ -2.23
NCL-210ENST00000494618 CDKN2CP42773 168 aa1.11□□□□□ -2.23
NCL-210ENST00000494618 RPL5P46777 297 aaKnown RBP1.11□□□□□ -2.23
NCL-210ENST00000494618 AP3S2P59780 193 aa1.11□□□□□ -2.23
NCL-210ENST00000494618 ARPC4P59998 168 aa1.11□□□□□ -2.23
NCL-210ENST00000494618 AESQ08117 197 aa1.11□□□□□ -2.23
NCL-210ENST00000494618 KCNJ8Q15842 424 aa1.11□□□□□ -2.23
NCL-210ENST00000494618 CT55Q8WUE5 264 aa1.11□□□□□ -2.23
NCL-210ENST00000494618 C2orf50Q96LR7 162 aa1.11□□□□□ -2.23
NCL-210ENST00000494618 TSPAN32Q96QS1 320 aa1.11□□□□□ -2.23
NCL-210ENST00000494618 FAM107BQ9H098 131 aa1.11□□□□□ -2.23
NCL-210ENST00000494618 OR51V1Q9H2C8 321 aa1.11□□□□□ -2.23
NCL-210ENST00000494618 CENPHQ9H3R5 247 aa1.11□□□□□ -2.23
NCL-210ENST00000494618 TRABDQ9H4I3 376 aa1.11□□□□□ -2.23
NCL-210ENST00000494618 CMTM6Q9NX76 183 aa1.11□□□□□ -2.23
NCL-210ENST00000494618 UBAP1Q9NZ09 502 aa1.11□□□□□ -2.23
NCL-210ENST00000494618 ATPIF1Q9UII2 106 aa1.11□□□□□ -2.23
NCL-210ENST00000494618 SLC22A13Q9Y226 551 aa1.11□□□□□ -2.23
NCL-210ENST00000494618 V9GYY5 206 aaPredicted RBP1.11□□□□□ -2.23
NCL-210ENST00000494618 MIA2Q96PC5 1412 aa1.11□□□□□ -2.23
NCL-210ENST00000494618 RGPD1P0DJD0 1748 aa1.11□□□□□ -2.23
NCL-210ENST00000494618 COL24A1Q17RW2 1714 aa1.11□□□□□ -2.23
NCL-210ENST00000494618 BPTFQ12830 3046 aa1.11□□□□□ -2.23
NCL-210ENST00000494618 CELSR3Q9NYQ7 3312 aa1.11□□□□□ -2.23
NCL-210ENST00000494618 TCOF1Q13428 1488 aaKnown RBP1.11□□□□□ -2.23
NCL-210ENST00000494618 SCN9AQ15858 1988 aa1.1□□□□□ -2.23
NCL-210ENST00000494618 KIF20BQ96Q89 1820 aa1.1□□□□□ -2.23
NCL-210ENST00000494618 USP34Q70CQ2 3546 aa1.1□□□□□ -2.23
NCL-210ENST00000494618 CEP290O15078 2479 aa1.1□□□□□ -2.23
NCL-210ENST00000494618 SPEGQ15772 3267 aa1.1□□□□□ -2.23
NCL-210ENST00000494618 SYNMO15061 1565 aa1.1□□□□□ -2.23
NCL-210ENST00000494618 ABCA8O94911 1581 aa1.1□□□□□ -2.23
NCL-210ENST00000494618 DIP2AQ14689 1571 aa1.1□□□□□ -2.23
NCL-210ENST00000494618 SOGA1O94964 1423 aa1.1□□□□□ -2.23
NCL-210ENST00000494618 FAM135BQ49AJ0 1406 aa1.1□□□□□ -2.23
NCL-210ENST00000494618 TRAV26-2A0A0B4J265 109 aa1.1□□□□□ -2.23
NCL-210ENST00000494618 SMIM24O75264 130 aa1.1□□□□□ -2.23
NCL-210ENST00000494618 SMIM10L2AP0DMW4 78 aa1.1□□□□□ -2.23
NCL-210ENST00000494618 SMIM10L2BP0DMW5 78 aa1.1□□□□□ -2.23
NCL-210ENST00000494618 YPEL3P61236 119 aaPredicted RBP1.1□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms