RNA–Protein interactions for RNA: ENST00000494395.1

ITGB1-217, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-217ENST00000494395 ZNF320A2RRD8 509 aa6.59□□□□□ -1.35
ITGB1-217ENST00000494395 C15orf62A8K5M9 175 aa6.59□□□□□ -1.35
ITGB1-217ENST00000494395 K7EMT4 169 aa6.59□□□□□ -1.35
ITGB1-217ENST00000494395 NUPL2O15504 423 aaKnown RBP6.59□□□□□ -1.35
ITGB1-217ENST00000494395 GNG7O60262 68 aa6.59□□□□□ -1.35
ITGB1-217ENST00000494395 TMEM50AO95807 157 aa6.59□□□□□ -1.35
ITGB1-217ENST00000494395 IGKV1-17P01599 117 aa6.59□□□□□ -1.35
ITGB1-217ENST00000494395 OPRK1P41145 380 aa6.59□□□□□ -1.35
ITGB1-217ENST00000494395 NPBWR1P48145 328 aa6.59□□□□□ -1.35
ITGB1-217ENST00000494395 RELQ04864 619 aaPredicted RBP6.59□□□□□ -1.35
ITGB1-217ENST00000494395 DEFB121Q5J5C9 76 aa6.59□□□□□ -1.35
ITGB1-217ENST00000494395 TMEM61Q8N0U2 210 aa6.59□□□□□ -1.35
ITGB1-217ENST00000494395 TMEM116Q8NCL8 245 aa6.59□□□□□ -1.35
ITGB1-217ENST00000494395 DUSP18Q8NEJ0 188 aa6.59□□□□□ -1.35
ITGB1-217ENST00000494395 OR52B4Q8NGK2 314 aa6.59□□□□□ -1.35
ITGB1-217ENST00000494395 OR4D5Q8NGN0 318 aa6.59□□□□□ -1.35
ITGB1-217ENST00000494395 OR1S1Q8NH92 325 aa6.59□□□□□ -1.35
ITGB1-217ENST00000494395 RNASEH2CQ8TDP1 164 aaKnown RBP6.59□□□□□ -1.35
ITGB1-217ENST00000494395 MITD1Q8WV92 249 aa6.59□□□□□ -1.35
ITGB1-217ENST00000494395 MARC2Q969Z3 335 aa6.59□□□□□ -1.35
ITGB1-217ENST00000494395 DAZ1Q9NQZ3 744 aaKnown RBP6.59□□□□□ -1.35
ITGB1-217ENST00000494395 NUDT15Q9NV35 164 aa6.59□□□□□ -1.35
ITGB1-217ENST00000494395 MRPL27Q9P0M9 148 aaKnown RBP6.59□□□□□ -1.35
ITGB1-217ENST00000494395 UFC1Q9Y3C8 167 aa6.59□□□□□ -1.35
ITGB1-217ENST00000494395 SMAD5-AS1Q9Y6J3 95 aa6.59□□□□□ -1.35
ITGB1-217ENST00000494395 U3KQ87 197 aa6.59□□□□□ -1.35
ITGB1-217ENST00000494395 IGHV3OR16-8A0A075B7F1 116 aa6.58□□□□□ -1.36
ITGB1-217ENST00000494395 A8MZ25 164 aa6.58□□□□□ -1.36
ITGB1-217ENST00000494395 PRSS46E5RG02 174 aa6.58□□□□□ -1.36
ITGB1-217ENST00000494395 CLN5O75503 358 aa6.58□□□□□ -1.36
ITGB1-217ENST00000494395 IGLC1P0CG04 106 aa6.58□□□□□ -1.36
ITGB1-217ENST00000494395 C4orf46Q504U0 113 aa6.58□□□□□ -1.36
ITGB1-217ENST00000494395 PRSS54Q6PEW0 395 aa6.58□□□□□ -1.36
ITGB1-217ENST00000494395 BTNL8Q6UX41 500 aa6.58□□□□□ -1.36
ITGB1-217ENST00000494395 ZNF600Q6ZNG1 722 aa6.58□□□□□ -1.36
ITGB1-217ENST00000494395 COQ8AQ8NI60 647 aa6.58□□□□□ -1.36
ITGB1-217ENST00000494395 DYNLRB2Q8TF09 96 aa6.58□□□□□ -1.36
ITGB1-217ENST00000494395 HIPK2Q9H2X6 1198 aa6.58□□□□□ -1.36
ITGB1-217ENST00000494395 TRAV6A0A075B6T7 132 aa6.57□□□□□ -1.36
ITGB1-217ENST00000494395 RPS10-NUDT3A0A1W2PQS6 291 aa6.57□□□□□ -1.36
ITGB1-217ENST00000494395 ZNF207O43670 478 aaKnown RBP6.57□□□□□ -1.36
ITGB1-217ENST00000494395 SYNGR2O43760 224 aa6.57□□□□□ -1.36
ITGB1-217ENST00000494395 SCAF4O95104 1147 aaKnown RBP6.57□□□□□ -1.36
ITGB1-217ENST00000494395 IFNA10P01566 189 aa6.57□□□□□ -1.36
ITGB1-217ENST00000494395 CD7P09564 240 aa6.57□□□□□ -1.36
ITGB1-217ENST00000494395 IGHV4-30-4P0DP06 118 aa6.57□□□□□ -1.36
ITGB1-217ENST00000494395 IAPPP10997 89 aa6.57□□□□□ -1.36
ITGB1-217ENST00000494395 SLC25A4P12235 298 aa6.57□□□□□ -1.36
ITGB1-217ENST00000494395 ATP5IP56385 69 aaPredicted RBP6.57□□□□□ -1.36
ITGB1-217ENST00000494395 LINC00310P59036 64 aa6.57□□□□□ -1.36
ITGB1-217ENST00000494395 TOMM20LQ6UXN7 152 aa6.57□□□□□ -1.36
ITGB1-217ENST00000494395 NOXA1Q86UR1 476 aa6.57□□□□□ -1.36
ITGB1-217ENST00000494395 SEC22CQ9BRL7 303 aa6.57□□□□□ -1.36
ITGB1-217ENST00000494395 SMPXQ9UHP9 88 aa6.57□□□□□ -1.36
ITGB1-217ENST00000494395 SELENOKQ9Y6D0 94 aa6.57□□□□□ -1.36
ITGB1-217ENST00000494395 TRAV25A0A0B4J276 109 aa6.56□□□□□ -1.36
ITGB1-217ENST00000494395 IGHV7-4-1A0A0J9YVY3 117 aa6.56□□□□□ -1.36
ITGB1-217ENST00000494395 FAM240BA0A1B0GVZ2 78 aa6.56□□□□□ -1.36
ITGB1-217ENST00000494395 CHEK1O14757 476 aa6.56□□□□□ -1.36
ITGB1-217ENST00000494395 MED6O75586 246 aa6.56□□□□□ -1.36
ITGB1-217ENST00000494395 IL5P05113 134 aa6.56□□□□□ -1.36
ITGB1-217ENST00000494395 FRMD6-AS1P0C7T7 363 aa6.56□□□□□ -1.36
ITGB1-217ENST00000494395 RND2P52198 227 aa6.56□□□□□ -1.36
ITGB1-217ENST00000494395 YPEL3P61236 119 aaPredicted RBP6.56□□□□□ -1.36
ITGB1-217ENST00000494395 FAM90A2PQ658T7 463 aa6.56□□□□□ -1.36
ITGB1-217ENST00000494395 MZT2BQ6NZ67 158 aa6.56□□□□□ -1.36
ITGB1-217ENST00000494395 SLC16A13Q7RTY0 426 aa6.56□□□□□ -1.36
ITGB1-217ENST00000494395 ZNF431Q8TF32 576 aaPredicted RBP6.56□□□□□ -1.36
ITGB1-217ENST00000494395 NPIPB3Q92617 1050 aa6.56□□□□□ -1.36
ITGB1-217ENST00000494395 CIB3Q96Q77 187 aaPredicted RBP6.56□□□□□ -1.36
ITGB1-217ENST00000494395 C20orf24Q9BUV8 137 aa6.56□□□□□ -1.36
ITGB1-217ENST00000494395 MAGT1Q9H0U3 335 aa6.56□□□□□ -1.36
ITGB1-217ENST00000494395 PUS1Q9Y606 427 aaKnown RBP eCLIP6.56□□□□□ -1.36
ITGB1-217ENST00000494395 IGKV1D-37A0A075B6S9 117 aa6.55□□□□□ -1.36
ITGB1-217ENST00000494395 TRAV30A0A087WSZ9 112 aa6.55□□□□□ -1.36
ITGB1-217ENST00000494395 C9orf118A6NHY6 69 aa6.55□□□□□ -1.36
ITGB1-217ENST00000494395 PMS2P5A8MQ11 134 aa6.55□□□□□ -1.36
ITGB1-217ENST00000494395 WRBO00258 174 aa6.55□□□□□ -1.36
ITGB1-217ENST00000494395 CCSO14618 274 aa6.55□□□□□ -1.36
ITGB1-217ENST00000494395 TSPAN4O14817 238 aa6.55□□□□□ -1.36
ITGB1-217ENST00000494395 IFNA21P01568 189 aa6.55□□□□□ -1.36
ITGB1-217ENST00000494395 OR10J1P30954 320 aa6.55□□□□□ -1.36
ITGB1-217ENST00000494395 GPX4P36969 197 aaPredicted RBP6.55□□□□□ -1.36
ITGB1-217ENST00000494395 NKX2-1P43699 371 aaPredicted RBP6.55□□□□□ -1.36
ITGB1-217ENST00000494395 PAX9P55771 341 aa6.55□□□□□ -1.36
ITGB1-217ENST00000494395 POLR2GP62487 172 aaKnown RBP eCLIP6.55□□□□□ -1.36
ITGB1-217ENST00000494395 GAMTQ14353 236 aa6.55□□□□□ -1.36
ITGB1-217ENST00000494395 IAH1Q2TAA2 248 aaPredicted RBP6.55□□□□□ -1.36
ITGB1-217ENST00000494395 TIGITQ495A1 244 aa6.55□□□□□ -1.36
ITGB1-217ENST00000494395 ETFRF1Q6IPR1 90 aa6.55□□□□□ -1.36
ITGB1-217ENST00000494395 LINC00322Q6ZN03 302 aaPredicted RBP6.55□□□□□ -1.36
ITGB1-217ENST00000494395 GTSCR1Q86UQ5 136 aa6.55□□□□□ -1.36
ITGB1-217ENST00000494395 SBSPONQ8IVN8 264 aa6.55□□□□□ -1.36
ITGB1-217ENST00000494395 ZBTB8BQ8NAP8 495 aaPredicted RBP6.55□□□□□ -1.36
ITGB1-217ENST00000494395 OR1S2Q8NGQ3 325 aa6.55□□□□□ -1.36
ITGB1-217ENST00000494395 RAB24Q969Q5 203 aa6.55□□□□□ -1.36
ITGB1-217ENST00000494395 RNF2Q99496 336 aa6.55□□□□□ -1.36
ITGB1-217ENST00000494395 NEURL2Q9BR09 285 aa6.55□□□□□ -1.36
ITGB1-217ENST00000494395 WFDC10AQ9H1F0 79 aa6.55□□□□□ -1.36
ITGB1-217ENST00000494395 VSIRQ9H7M9 311 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms