RNA–Protein interactions for RNA: ENST00000494132.1

ATG4B-224, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 828 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-224ENST00000494132 CENPXA8MT69 81 aa10.94□□□□□ -0.66
ATG4B-224ENST00000494132 MPTX1A8MV57 137 aa10.94□□□□□ -0.66
ATG4B-224ENST00000494132 PLA2G10O15496 165 aa10.94□□□□□ -0.66
ATG4B-224ENST00000494132 IFNA4P05014 189 aa10.94□□□□□ -0.66
ATG4B-224ENST00000494132 IGLC1P0CG04 106 aa10.94□□□□□ -0.66
ATG4B-224ENST00000494132 UBE2MP61081 183 aaKnown RBP10.94□□□□□ -0.66
ATG4B-224ENST00000494132 TCF24Q7RTU0 167 aa10.94□□□□□ -0.66
ATG4B-224ENST00000494132 NPIPB3Q92617 1050 aa10.94□□□□□ -0.66
ATG4B-224ENST00000494132 U3KQ87 197 aa10.94□□□□□ -0.66
ATG4B-224ENST00000494132 DFFBO76075 338 aa10.93□□□□□ -0.66
ATG4B-224ENST00000494132 OR4E1P0C645 316 aa10.93□□□□□ -0.66
ATG4B-224ENST00000494132 SLC25A4P12235 298 aa10.93□□□□□ -0.66
ATG4B-224ENST00000494132 OR10J1P30954 320 aa10.93□□□□□ -0.66
ATG4B-224ENST00000494132 DHRS2Q13268 280 aa10.93□□□□□ -0.66
ATG4B-224ENST00000494132 CNPY1Q3B7I2 92 aa10.93□□□□□ -0.66
ATG4B-224ENST00000494132 C4orf46Q504U0 113 aa10.93□□□□□ -0.66
ATG4B-224ENST00000494132 FAM90A2PQ658T7 463 aa10.93□□□□□ -0.66
ATG4B-224ENST00000494132 APRG1Q8IVJ8 170 aa10.93□□□□□ -0.66
ATG4B-224ENST00000494132 OR1S2Q8NGQ3 325 aa10.93□□□□□ -0.66
ATG4B-224ENST00000494132 CACFD1Q9UGQ2 172 aa10.93□□□□□ -0.66
ATG4B-224ENST00000494132 TMED3Q9Y3Q3 217 aa10.93□□□□□ -0.66
ATG4B-224ENST00000494132 TRAV30A0A087WSZ9 112 aa10.92□□□□□ -0.66
ATG4B-224ENST00000494132 LOC102724200A0A096LPH7 203 aaPredicted RBP10.92□□□□□ -0.66
ATG4B-224ENST00000494132 WRBO00258 174 aa10.92□□□□□ -0.66
ATG4B-224ENST00000494132 LYRM1O43325 122 aa10.92□□□□□ -0.66
ATG4B-224ENST00000494132 SCGB2A1O75556 95 aa10.92□□□□□ -0.66
ATG4B-224ENST00000494132 RPL35AP18077 110 aaKnown RBP10.92□□□□□ -0.66
ATG4B-224ENST00000494132 NPPCP23582 126 aa10.92□□□□□ -0.66
ATG4B-224ENST00000494132 RPL11P62913 178 aaKnown RBP10.92□□□□□ -0.66
ATG4B-224ENST00000494132 ETFRF1Q6IPR1 90 aa10.92□□□□□ -0.66
ATG4B-224ENST00000494132 LYG2Q86SG7 212 aa10.92□□□□□ -0.66
ATG4B-224ENST00000494132 METTL26Q96S19 204 aa10.92□□□□□ -0.66
ATG4B-224ENST00000494132 C7orf50Q9BRJ6 194 aaKnown RBP10.92□□□□□ -0.66
ATG4B-224ENST00000494132 GGTLC1Q9BX51 225 aa10.92□□□□□ -0.66
ATG4B-224ENST00000494132 VSIRQ9H7M9 311 aa10.92□□□□□ -0.66
ATG4B-224ENST00000494132 TRAV6A0A075B6T7 132 aa10.91□□□□□ -0.66
ATG4B-224ENST00000494132 PIGBOS1A0A0B4J2F0 54 aa10.91□□□□□ -0.66
ATG4B-224ENST00000494132 H3BP45 60 aa10.91□□□□□ -0.66
ATG4B-224ENST00000494132 SLC25A6P12236 298 aa10.91□□□□□ -0.66
ATG4B-224ENST00000494132 NOXA1Q86UR1 476 aa10.91□□□□□ -0.66
ATG4B-224ENST00000494132 MUC7Q8TAX7 377 aa10.91□□□□□ -0.66
ATG4B-224ENST00000494132 C20orf85Q9H1P6 137 aa10.91□□□□□ -0.66
ATG4B-224ENST00000494132 EDA2RQ9HAV5 297 aa10.91□□□□□ -0.66
ATG4B-224ENST00000494132 NBEAL2Q6ZNJ1 2754 aa10.91□□□□□ -0.66
ATG4B-224ENST00000494132 SYNGR2O43760 224 aa10.9□□□□□ -0.66
ATG4B-224ENST00000494132 IL4P05112 153 aa10.9□□□□□ -0.66
ATG4B-224ENST00000494132 BMI1P35226 326 aa10.9□□□□□ -0.66
ATG4B-224ENST00000494132 USF2Q15853 346 aaPredicted RBP10.9□□□□□ -0.66
ATG4B-224ENST00000494132 ZFAND6Q6FIF0 208 aa10.9□□□□□ -0.66
ATG4B-224ENST00000494132 FAM24BQ8N5W8 94 aa10.9□□□□□ -0.66
ATG4B-224ENST00000494132 COQ8AQ8NI60 647 aa10.9□□□□□ -0.66
ATG4B-224ENST00000494132 Q8WTZ3 238 aa10.9□□□□□ -0.66
ATG4B-224ENST00000494132 SLC35E1Q96K37 410 aa10.9□□□□□ -0.66
ATG4B-224ENST00000494132 MS4A6AQ9H2W1 248 aa10.9□□□□□ -0.66
ATG4B-224ENST00000494132 MAP6D1Q9H9H5 199 aa10.9□□□□□ -0.66
ATG4B-224ENST00000494132 RABAC1Q9UI14 185 aa10.9□□□□□ -0.66
ATG4B-224ENST00000494132 DNAH7Q8WXX0 4024 aa10.89□□□□□ -0.67
ATG4B-224ENST00000494132 A6NHS1 94 aa10.89□□□□□ -0.67
ATG4B-224ENST00000494132 FAM90A26D6RGX4 464 aa10.89□□□□□ -0.67
ATG4B-224ENST00000494132 DNASE2O00115 360 aaPredicted RBP10.89□□□□□ -0.67
ATG4B-224ENST00000494132 MED6O75586 246 aa10.89□□□□□ -0.67
ATG4B-224ENST00000494132 PSG1P11464 419 aa10.89□□□□□ -0.67
ATG4B-224ENST00000494132 CRYBB3P26998 211 aa10.89□□□□□ -0.67
ATG4B-224ENST00000494132 P2RY1P47900 373 aa10.89□□□□□ -0.67
ATG4B-224ENST00000494132 YPEL3P61236 119 aaPredicted RBP10.89□□□□□ -0.67
ATG4B-224ENST00000494132 POLR2GP62487 172 aaKnown RBP eCLIP10.89□□□□□ -0.67
ATG4B-224ENST00000494132 ZNF90Q03938 601 aa10.89□□□□□ -0.67
ATG4B-224ENST00000494132 GAMTQ14353 236 aa10.89□□□□□ -0.67
ATG4B-224ENST00000494132 SPANXN5Q5MJ07 72 aa10.89□□□□□ -0.67
ATG4B-224ENST00000494132 STXBP6Q8NFX7 210 aa10.89□□□□□ -0.67
ATG4B-224ENST00000494132 TMEM231Q9H6L2 316 aa10.89□□□□□ -0.67
ATG4B-224ENST00000494132 IGKV1D-37A0A075B6S9 117 aa10.88□□□□□ -0.67
ATG4B-224ENST00000494132 A0A1W2PS18 150 aa10.88□□□□□ -0.67
ATG4B-224ENST00000494132 ZFP92A6NM28 416 aa10.88□□□□□ -0.67
ATG4B-224ENST00000494132 CCSO14618 274 aa10.88□□□□□ -0.67
ATG4B-224ENST00000494132 SCGB1D2O95969 90 aa10.88□□□□□ -0.67
ATG4B-224ENST00000494132 TOMM40O96008 361 aa10.88□□□□□ -0.67
ATG4B-224ENST00000494132 TCRBP04435 133 aa10.88□□□□□ -0.67
ATG4B-224ENST00000494132 RAB11AP62491 216 aa10.88□□□□□ -0.67
ATG4B-224ENST00000494132 PAFAH1B2P68402 229 aa10.88□□□□□ -0.67
ATG4B-224ENST00000494132 LEMD1Q68G75 181 aa10.88□□□□□ -0.67
ATG4B-224ENST00000494132 OR51G1Q8NGK1 321 aa10.88□□□□□ -0.67
ATG4B-224ENST00000494132 CCDC32Q9BV29 185 aa10.88□□□□□ -0.67
ATG4B-224ENST00000494132 PBDC1Q9BVG4 233 aa10.88□□□□□ -0.67
ATG4B-224ENST00000494132 KMT2CQ8NEZ4 4911 aaKnown RBP10.87□□□□□ -0.67
ATG4B-224ENST00000494132 C3orf84H3BNL1 204 aa10.87□□□□□ -0.67
ATG4B-224ENST00000494132 SSSCA1O60232 199 aa10.87□□□□□ -0.67
ATG4B-224ENST00000494132 IFNA21P01568 189 aa10.87□□□□□ -0.67
ATG4B-224ENST00000494132 HNRNPCP07910 306 aaKnown RBP eCLIP10.87□□□□□ -0.67
ATG4B-224ENST00000494132 RD3LP0DJH9 198 aa10.87□□□□□ -0.67
ATG4B-224ENST00000494132 NKX2-1P43699 371 aaPredicted RBP10.87□□□□□ -0.67
ATG4B-224ENST00000494132 DEFB131AP59861 70 aa10.87□□□□□ -0.67
ATG4B-224ENST00000494132 OR2F1Q13607 317 aa10.87□□□□□ -0.67
ATG4B-224ENST00000494132 DEFB135Q30KP9 77 aa10.87□□□□□ -0.67
ATG4B-224ENST00000494132 CASC10Q5T4H9 136 aa10.87□□□□□ -0.67
ATG4B-224ENST00000494132 OR4D5Q8NGN0 318 aa10.87□□□□□ -0.67
ATG4B-224ENST00000494132 NARS2Q96I59 477 aaKnown RBP10.87□□□□□ -0.67
ATG4B-224ENST00000494132 CIB3Q96Q77 187 aaPredicted RBP10.87□□□□□ -0.67
ATG4B-224ENST00000494132 SEC22CQ9BRL7 303 aa10.87□□□□□ -0.67
ATG4B-224ENST00000494132 OVOL2Q9BRP0 275 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms